; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0008985 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008985
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNiemann-Pick C1 protein-like isoform X2
Genome locationchr11:14769942..14775527
RNA-Seq ExpressionIVF0008985
SyntenyIVF0008985
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0048868 - pollen tube development (biological process)
GO:0090153 - regulation of sphingolipid biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005319 - lipid transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047847.1 Niemann-Pick C1 protein-like isoform X2 [Cucumis melo var. makuwa]1.37e-12898.95Show/hide
Query:  SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR
        SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR
Subjt:  SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR

Query:  HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLKV
        HSDLVGDRPTT QFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLK+
Subjt:  HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLKV

KAE8646830.1 hypothetical protein Csa_018310 [Cucumis sativus]1.71e-12292.63Show/hide
Query:  SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR
        SS+S++TNQLCSISHCDSNSLLNEI+RASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPD+GFCDSSEGVC+DCTTCF 
Subjt:  SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR

Query:  HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLKV
        HSDLVG RPTT QF+EKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYE GIIKASEFRSYHTPLNKQGDYVNALRAAK+F SKISDSLK+
Subjt:  HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLKV

XP_008448193.1 PREDICTED: Niemann-Pick C1 protein-like isoform X1 [Cucumis melo]2.07e-12999.47Show/hide
Query:  SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR
        SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR
Subjt:  SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR

Query:  HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLKV
        HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLK+
Subjt:  HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLKV

XP_008448194.1 PREDICTED: Niemann-Pick C1 protein-like isoform X2 [Cucumis melo]1.78e-12999.47Show/hide
Query:  SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR
        SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR
Subjt:  SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR

Query:  HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLKV
        HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLK+
Subjt:  HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLKV

XP_011656920.1 NPC intracellular cholesterol transporter 1 isoform X2 [Cucumis sativus]1.49e-12293.16Show/hide
Query:  SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR
        SS+S++TNQLCSISHCDSNSLLNEI+RASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPD+GFCDSSEGVC+DCTTCF 
Subjt:  SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR

Query:  HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLKV
        HSDLVG RPTT QF+EKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYE GIIKASEFRSYHTPLNKQGDYVNALRAAK+F SKISDSLKV
Subjt:  HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLKV

TrEMBL top hitse value%identityAlignment
A0A0A0KCU7 Uncharacterized protein3.0e-10593.26Show/hide
Query:  MLLSSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTT
        MLLSS+S++TNQLCSISHCDSNSLLNEI+RASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPD+GFCDSSEGVC+DCTT
Subjt:  MLLSSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTT

Query:  CFRHSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLKV
        CF HSDLVG RPTT QF+EKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYE GIIKASEFRSYHTPLNKQGDYVNALRAAK+F SKISDSLKV
Subjt:  CFRHSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLKV

A0A1S3BJ43 Niemann-Pick C1 protein-like isoform X12.3e-11099.47Show/hide
Query:  SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR
        SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR
Subjt:  SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR

Query:  HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLKV
        HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLK+
Subjt:  HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLKV

A0A1S3BJR3 Niemann-Pick C1 protein-like isoform X22.3e-11099.47Show/hide
Query:  SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR
        SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR
Subjt:  SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR

Query:  HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLKV
        HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLK+
Subjt:  HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLKV

A0A5A7U0V7 Niemann-Pick C1 protein-like isoform X21.5e-10998.95Show/hide
Query:  SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR
        SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR
Subjt:  SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR

Query:  HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLKV
        HSDLVGDRPTT QFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLK+
Subjt:  HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLKV

A0A6J1I473 Niemann-Pick C1 protein-like1.8e-10292.63Show/hide
Query:  SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR
        SS+SR TNQLCSIS CDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCC PDEGFCD+SEGVC+DCTTCF 
Subjt:  SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR

Query:  HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLKV
        HSDLV  RPTT QF+EKLPWFLNSLPSADCAKGGHGAYTNSVNL GYE GIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLK+
Subjt:  HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLKV

SwissProt top hitse value%identityAlignment
P56941 NPC intracellular cholesterol transporter 15.3e-1929.83Show/hide
Query:  NQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFRHSDLVGD
        N +C    C+++SL+ +I  A+       I    +SW+DD+  W+ P++  CCR + +                + FC++S  V   C  C   +     
Subjt:  NQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFRHSDLVGD

Query:  RPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSL
        RP  E F   LP FL+  P+  C KGGH AY+++VN+ G   G + A+ F +YHT L    D+++A++ A+   S I+ ++
Subjt:  RPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSL

Q6T3U3 NPC1-like intracellular cholesterol transporter 14.1e-2739.01Show/hide
Query:  NQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFRHSDLVGD
        N  CS + C S SL  +I  AS  P+ +Y+A  A+SW+DDF+ WL+P +  CCR +  G   P  D+         FC S++        C   + L   
Subjt:  NQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFRHSDLVGD

Query:  RPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLK
        RPT EQF + LPWFLN  P+  C KGG  AY  SVNL     G + AS+F +YH PL    D+  ALRA++   + I+  L+
Subjt:  RPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLK

Q6T3U4 NPC1-like intracellular cholesterol transporter 14.3e-2940.66Show/hide
Query:  NQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFRHSDLVGD
        N +CS + C+S SL  +I  AS  P  +Y+A  A+SW+DDF+ WL+P +  CCR +T G   P  D+         FC S++        C   + L   
Subjt:  NQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFRHSDLVGD

Query:  RPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLK
        RPTTEQF + LPWFLN  P+  C KGG  AY  SVNL     G I AS+F +YH PL    D+  ALRA++   + I+  L+
Subjt:  RPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLK

Q9UHC9 NPC1-like intracellular cholesterol transporter 11.1e-2435.58Show/hide
Query:  NQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFRHSDLVGD
        N +CS + C++ S   +I  A+  PE +Y+A PA+SW+DDF+ WL+P +  CCR + +G   P  D+         FC S+         C   S  +G 
Subjt:  NQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFRHSDLVGD

Query:  -RPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKG---------------YEIGIIKA----------SEFRSYHTPLNKQGDYVNALRAAKEFC
         RP+ EQF + LPWFLN  P+  C KGG  AY+ SVNL                    G I A          S F +YH PL    DY  ALRAA+E  
Subjt:  -RPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKG---------------YEIGIIKA----------SEFRSYHTPLNKQGDYVNALRAAKEFC

Query:  SKISDSLK
        + I+  L+
Subjt:  SKISDSLK

Q9VRC9 NPC intracellular cholesterol transporter 1 homolog 1b2.4e-1929.84Show/hide
Query:  SRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCR-KFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR
        S   Q N +C    C++NSL  ++   +  PE+  +A+PA+SWLDD++ WL+     CC+   T G +C                 SS     DC  C R
Subjt:  SRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCR-KFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR

Query:  HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGI--IKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLK
             G RP  E F + +P+FL  LP A+CAK G  +Y ++V     ++G+  ++ S F  Y T      ++ + LR  +    +I+   K
Subjt:  HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGI--IKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLK

Arabidopsis top hitse value%identityAlignment
AT1G42470.1 Patched family protein3.6e-8776.84Show/hide
Query:  SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR
        SS SR TNQLCSI+ C+ NSLLNEI+RASLTPEL+YIAKPAASWLDDFLVWLSPEAFGCCRKFTNG++CPPDDQPPCC P +  C  SE VC+DCTTCFR
Subjt:  SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR

Query:  HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLKV
        H+DL  DRP+T QFKEKLPWFLN+LPSADCAKGGHGAY++SV+L+GY  GII+AS FR+YHTPLNKQ D+VN++RAA+EF +K+S SLK+
Subjt:  HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLKV

AT4G38350.1 Patched family protein2.2e-9281.05Show/hide
Query:  SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR
        SS SR TNQLCSIS C+SNSLLNEISRAS   + +YIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCC  +E  C S +G+C+DCTTCFR
Subjt:  SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR

Query:  HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLKV
        HSDLV DRP+T QF+EKLPWFLN+LPSADCAKGGHGAYTNSV+LKGYE G+I+ASEFR+YHTPLN QGDYVNALRAA+EF S+IS+SLK+
Subjt:  HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLKV

AT4G38350.2 Patched family protein2.2e-9281.05Show/hide
Query:  SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR
        SS SR TNQLCSIS C+SNSLLNEISRAS   + +YIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCC  +E  C S +G+C+DCTTCFR
Subjt:  SSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFR

Query:  HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLKV
        HSDLV DRP+T QF+EKLPWFLN+LPSADCAKGGHGAYTNSV+LKGYE G+I+ASEFR+YHTPLN QGDYVNALRAA+EF S+IS+SLK+
Subjt:  HSDLVGDRPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTACTCAGCTCTAGATCTAGACAGACAAACCAGCTGTGCTCCATCAGCCATTGTGATTCAAACTCCCTGTTGAATGAGATATCAAGAGCATCATTGACACCAGAGTT
GAACTACATTGCTAAACCAGCAGCATCATGGCTCGATGATTTTCTTGTCTGGTTGTCTCCAGAGGCATTTGGTTGCTGCCGGAAATTTACAAATGGTTCTTATTGTCCTC
CTGATGACCAGCCTCCTTGCTGTTTTCCGGATGAAGGTTTCTGTGACTCAAGCGAAGGAGTGTGCAGAGATTGTACAACTTGCTTTCGCCACTCAGATTTGGTTGGTGAC
CGTCCAACTACAGAGCAATTCAAGGAGAAGCTTCCATGGTTCCTCAATTCTCTTCCATCTGCCGACTGTGCAAAGGGTGGTCATGGAGCTTATACCAATAGTGTAAATTT
GAAGGGTTATGAAATTGGTATCATAAAAGCTTCTGAGTTTCGGAGTTATCACACACCACTTAACAAACAAGGTGATTATGTAAATGCACTGCGAGCTGCAAAGGAGTTTT
GCTCAAAGATTTCTGATTCTTTGAAGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTACTCAGCTCTAGATCTAGACAGACAAACCAGCTGTGCTCCATCAGCCATTGTGATTCAAACTCCCTGTTGAATGAGATATCAAGAGCATCATTGACACCAGAGTT
GAACTACATTGCTAAACCAGCAGCATCATGGCTCGATGATTTTCTTGTCTGGTTGTCTCCAGAGGCATTTGGTTGCTGCCGGAAATTTACAAATGGTTCTTATTGTCCTC
CTGATGACCAGCCTCCTTGCTGTTTTCCGGATGAAGGTTTCTGTGACTCAAGCGAAGGAGTGTGCAGAGATTGTACAACTTGCTTTCGCCACTCAGATTTGGTTGGTGAC
CGTCCAACTACAGAGCAATTCAAGGAGAAGCTTCCATGGTTCCTCAATTCTCTTCCATCTGCCGACTGTGCAAAGGGTGGTCATGGAGCTTATACCAATAGTGTAAATTT
GAAGGGTTATGAAATTGGTATCATAAAAGCTTCTGAGTTTCGGAGTTATCACACACCACTTAACAAACAAGGTGATTATGTAAATGCACTGCGAGCTGCAAAGGAGTTTT
GCTCAAAGATTTCTGATTCTTTGAAGGTTTGA
Protein sequenceShow/hide protein sequence
MLLSSRSRQTNQLCSISHCDSNSLLNEISRASLTPELNYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGSYCPPDDQPPCCFPDEGFCDSSEGVCRDCTTCFRHSDLVGD
RPTTEQFKEKLPWFLNSLPSADCAKGGHGAYTNSVNLKGYEIGIIKASEFRSYHTPLNKQGDYVNALRAAKEFCSKISDSLKV