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IVF0009002 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009002
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCyclin-dependent protein kinase inhibitor SMR2
Genome locationchr12:8712473..8714228
RNA-Seq ExpressionIVF0009002
SyntenyIVF0009002
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052125.1 cyclin-dependent protein kinase inhibitor SMR2 [Cucumis melo var. makuwa]7.55e-55100Show/hide
Query:  MSQIHKSDQEKVLETPKALEYGDRSTEEGSGEALKAAEDDEGESCRTPTSLRHRIPIAQSCPTTPRKQRVARKRKISDQSFFEATGRGE
        MSQIHKSDQEKVLETPKALEYGDRSTEEGSGEALKAAEDDEGESCRTPTSLRHRIPIAQSCPTTPRKQRVARKRKISDQSFFEATGRGE
Subjt:  MSQIHKSDQEKVLETPKALEYGDRSTEEGSGEALKAAEDDEGESCRTPTSLRHRIPIAQSCPTTPRKQRVARKRKISDQSFFEATGRGE

KAE8652786.1 hypothetical protein Csa_022878 [Cucumis sativus]2.84e-4585.39Show/hide
Query:  MSQIHKSDQEKVLETPKALEYGDRSTEEGSGEALKAAEDDEGESCRTPTSLRHRIPIAQSCPTTPRKQRVARKRKISDQSFFEATGRGE
        MSQ HKSDQ+KVLE P+A E+GDRSTEEG GEALKAAE D+GESCRTPTS +HRIPIAQSCPTTPRKQRV RKRK SDQSFFEATGRGE
Subjt:  MSQIHKSDQEKVLETPKALEYGDRSTEEGSGEALKAAEDDEGESCRTPTSLRHRIPIAQSCPTTPRKQRVARKRKISDQSFFEATGRGE

KAG6583595.1 hypothetical protein SDJN03_19527, partial [Cucurbita argyrosperma subsp. sororia]8.30e-3170Show/hide
Query:  MSQIHKSDQEKVLETPKALEYGDRSTEE-GSGEALKAAEDDEGESCRTPTSLRHRIPIAQSCPTTPRKQRVARKRKISDQSFFEATGRGE
        MSQ HKSD +KV E PK  E GDRS EE G GEA+       GESCRTPTSLRHRIP A+S PTTPRK++VA KRK SDQSFFE TGRGE
Subjt:  MSQIHKSDQEKVLETPKALEYGDRSTEE-GSGEALKAAEDDEGESCRTPTSLRHRIPIAQSCPTTPRKQRVARKRKISDQSFFEATGRGE

KAG6586014.1 hypothetical protein SDJN03_18747, partial [Cucurbita argyrosperma subsp. sororia]2.47e-2864.04Show/hide
Query:  MSQIHKSDQEKVLETPKALEYGDRSTEEGSGEALKAAEDDEGESCRTPTSLRHRIPIAQSCPTTPRKQRVARKRKISDQSFFEATGRGE
        MS+   SD +K LE  K  E  DRS EE  GEAL A ED  GESCRTP+SL+HRIP A+SCPTTPRK++V  KRK SDQSFFE+T R E
Subjt:  MSQIHKSDQEKVLETPKALEYGDRSTEEGSGEALKAAEDDEGESCRTPTSLRHRIPIAQSCPTTPRKQRVARKRKISDQSFFEATGRGE

KAG7019295.1 hypothetical protein SDJN02_18255, partial [Cucurbita argyrosperma subsp. argyrosperma]8.30e-3168.89Show/hide
Query:  MSQIHKSDQEKVLETPKALEYGDRSTEE-GSGEALKAAEDDEGESCRTPTSLRHRIPIAQSCPTTPRKQRVARKRKISDQSFFEATGRGE
        MSQ HKSD +KV E PK  E GDRS EE G GEA+  +    GESCRTPTSLRHRIP A+S PTTPRK+++A KRK SDQSFFE TGRGE
Subjt:  MSQIHKSDQEKVLETPKALEYGDRSTEE-GSGEALKAAEDDEGESCRTPTSLRHRIPIAQSCPTTPRKQRVARKRKISDQSFFEATGRGE

TrEMBL top hitse value%identityAlignment
A0A067F2H9 Uncharacterized protein (Fragment)1.3e-0751.25Show/hide
Query:  LETPKALEYGDRSTEEGSGEALKAA-EDDEGESCRTPTSLRHRIPIAQSCPTTPRK--QRVARKRKISDQSFFEATGRGE
        +  PK        TEE +GE ++AA ED   E C+TPTS  H+IP  QSCPTTPRK  Q    KRK+ +  FFEATGR E
Subjt:  LETPKALEYGDRSTEEGSGEALKAA-EDDEGESCRTPTSLRHRIPIAQSCPTTPRK--QRVARKRKISDQSFFEATGRGE

A0A0A0LV74 Uncharacterized protein6.3e-3485.56Show/hide
Query:  MSQIHKSDQEKVLETPKALEYGDRSTEEGSGEALKAAEDDEGESCRTPTSLRHRIPIAQSCPTTPRKQRVARKRKISDQSFFEATGRGEF
        MSQ HKSDQ+KVLE P+A E+GDRSTEEG GEALKAAE D+GESCRTPTS +HRIPIAQSCPTTPRKQRV RKRK SDQSFFEATGRGEF
Subjt:  MSQIHKSDQEKVLETPKALEYGDRSTEEGSGEALKAAEDDEGESCRTPTSLRHRIPIAQSCPTTPRKQRVARKRKISDQSFFEATGRGEF

A0A2H5Q221 Uncharacterized protein1.3e-0751.25Show/hide
Query:  LETPKALEYGDRSTEEGSGEALKAA-EDDEGESCRTPTSLRHRIPIAQSCPTTPRK--QRVARKRKISDQSFFEATGRGE
        +  PK        TEE +GE ++AA ED   E C+TPTS  H+IP  QSCPTTPRK  Q    KRK+ +  FFEATGR E
Subjt:  LETPKALEYGDRSTEEGSGEALKAA-EDDEGESCRTPTSLRHRIPIAQSCPTTPRK--QRVARKRKISDQSFFEATGRGE

A0A5D3BHE9 Cyclin-dependent protein kinase inhibitor SMR22.0e-40100Show/hide
Query:  MSQIHKSDQEKVLETPKALEYGDRSTEEGSGEALKAAEDDEGESCRTPTSLRHRIPIAQSCPTTPRKQRVARKRKISDQSFFEATGRGE
        MSQIHKSDQEKVLETPKALEYGDRSTEEGSGEALKAAEDDEGESCRTPTSLRHRIPIAQSCPTTPRKQRVARKRKISDQSFFEATGRGE
Subjt:  MSQIHKSDQEKVLETPKALEYGDRSTEEGSGEALKAAEDDEGESCRTPTSLRHRIPIAQSCPTTPRKQRVARKRKISDQSFFEATGRGE

V4RSW1 Uncharacterized protein1.3e-0751.25Show/hide
Query:  LETPKALEYGDRSTEEGSGEALKAA-EDDEGESCRTPTSLRHRIPIAQSCPTTPRK--QRVARKRKISDQSFFEATGRGE
        +  PK        TEE +GE ++AA ED   E C+TPTS  H+IP  QSCPTTPRK  Q    KRK+ +  FFEATGR E
Subjt:  LETPKALEYGDRSTEEGSGEALKAA-EDDEGESCRTPTSLRHRIPIAQSCPTTPRK--QRVARKRKISDQSFFEATGRGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G08180.1 unknown protein8.8e-0437.35Show/hide
Query:  KVLETPKALEYGDRSTEEGSGEALKAAEDDEGESCRTPTSLRHRIPIAQSCPTTPRKQ----RVARKRKIS-DQSFFEATGRG
        + LE  K +E   RS EE   +   + +++  ES  TPTS  H+IP  ++CP  PRK+     + +K ++S D  FFEAT  G
Subjt:  KVLETPKALEYGDRSTEEGSGEALKAAEDDEGESCRTPTSLRHRIPIAQSCPTTPRKQ----RVARKRKIS-DQSFFEATGRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCAAATTCACAAATCTGATCAAGAGAAGGTATTAGAAACCCCAAAGGCACTGGAATACGGTGATCGAAGCACGGAGGAAGGTAGCGGAGAAGCACTTAAGGCAGC
GGAGGATGATGAAGGAGAGAGTTGTCGAACACCAACATCACTCCGACATCGAATTCCGATCGCACAAAGCTGCCCGACGACACCAAGAAAGCAGAGAGTTGCGAGAAAGA
GGAAAATTTCTGACCAAAGCTTCTTTGAGGCCACCGGAAGAGGAGAGTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCAAATTCACAAATCTGATCAAGAGAAGGTATTAGAAACCCCAAAGGCACTGGAATACGGTGATCGAAGCACGGAGGAAGGTAGCGGAGAAGCACTTAAGGCAGC
GGAGGATGATGAAGGAGAGAGTTGTCGAACACCAACATCACTCCGACATCGAATTCCGATCGCACAAAGCTGCCCGACGACACCAAGAAAGCAGAGAGTTGCGAGAAAGA
GGAAAATTTCTGACCAAAGCTTCTTTGAGGCCACCGGAAGAGGAGAGTTCTAA
Protein sequenceShow/hide protein sequence
MSQIHKSDQEKVLETPKALEYGDRSTEEGSGEALKAAEDDEGESCRTPTSLRHRIPIAQSCPTTPRKQRVARKRKISDQSFFEATGRGEF