; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0009033 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009033
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPhotosynthetic NDH subunit of subcomplex B 3
Genome locationchr02:6171365..6172413
RNA-Seq ExpressionIVF0009033
SyntenyIVF0009033
Gene Ontology termsGO:1901800 - positive regulation of proteasomal protein catabolic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008233 - peptidase activity (molecular function)
GO:0036402 - proteasome-activating ATPase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043127.1 putative tetraacyldisaccharide 4'-kinase [Cucumis melo var. makuwa]2.23e-0496Show/hide
Query:  AYLDELSNVNKFQVSKGFLLLRVNE
        AYLDELSN NKFQVSKGFLLLRVNE
Subjt:  AYLDELSNVNKFQVSKGFLLLRVNE
TYK02519.1 26S protease regulatory subunit 8-like protein B-like [Cucumis melo var. makuwa]2.58e-1190.24Show/hide
Query:  KATLADSFLAYLDELSNVNKFQVSKGFLLLRVNEVITMLVV
        +ATL DSFLAYLDELSN  KFQVSKGFLLLRVNEVITMLVV
Subjt:  KATLADSFLAYLDELSNVNKFQVSKGFLLLRVNEVITMLVV
TYK27600.1 photosynthetic NDH subunit of subcomplex B 3 [Cucumis melo var. makuwa]1.25e-14100Show/hide
Query:  ATLADSFLAYLDELSNVNKFQVSKGFLLLRVNEVITMLVVM
        ATLADSFLAYLDELSNVNKFQVSKGFLLLRVNEVITMLVVM
Subjt:  ATLADSFLAYLDELSNVNKFQVSKGFLLLRVNEVITMLVVM
TrEMBL top hitse value%identityAlignment
A0A0A0KSX2 Uncharacterized protein6.8e-0457.69Show/hide
Query:  MLQERRLAVIRKATLADSFLAYLDELSNVNKFQVSKGFLLLRVNEVITMLVV
        M Q R+    ++ATL DSFLA LDELS+ +KF+V  G LL+ VNEVI +LVV
Subjt:  MLQERRLAVIRKATLADSFLAYLDELSNVNKFQVSKGFLLLRVNEVITMLVV
A0A5D3BWM3 26S protease regulatory subunit 8-like protein B-like7.1e-0988.1Show/hide
Query:  KATLADSFLAYLDELSNVNKFQVSKGFLLLRVNEVITMLVVM
        +ATL DSFLAYLDELSN  KFQVSKGFLLLRVNEVITMLVV+
Subjt:  KATLADSFLAYLDELSNVNKFQVSKGFLLLRVNEVITMLVVM
A0A5D3DWD6 Photosynthetic NDH subunit of subcomplex B 34.4e-11100Show/hide
Query:  ATLADSFLAYLDELSNVNKFQVSKGFLLLRVNEVITMLVVM
        ATLADSFLAYLDELSNVNKFQVSKGFLLLRVNEVITMLVVM
Subjt:  ATLADSFLAYLDELSNVNKFQVSKGFLLLRVNEVITMLVVM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCAAGAGCGCCGATTAGCTGTCATCCGAAAGGCTACTTTGGCTGATTCCTTTCTAGCATATCTTGATGAACTCTCTAATGTAAACAAGTTTCAGGTTTCTAAAGG
CTTTTTACTTCTCCGTGTAAATGAAGTAATAACTATGTTGGTTGTTATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGCAAGAGCGCCGATTAGCTGTCATCCGAAAGGCTACTTTGGCTGATTCCTTTCTAGCATATCTTGATGAACTCTCTAATGTAAACAAGTTTCAGGTTTCTAAAGG
CTTTTTACTTCTCCGTGTAAATGAAGTAATAACTATGTTGGTTGTTATGTAA
Protein sequenceShow/hide protein sequence
MLQERRLAVIRKATLADSFLAYLDELSNVNKFQVSKGFLLLRVNEVITMLVVM