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IVF0009038 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009038
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr01:20249054..20249463
RNA-Seq ExpressionIVF0009038
SyntenyIVF0009038
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041943.1 hypothetical protein E6C27_scaffold67G003650 [Cucumis melo var. makuwa]6.97e-64100Show/hide
Query:  MRHGTYFKDNIHHLVSSAIPPPSQPKLPKNQGSNLGGKEIHLVEAMATTLEKEINEHKDESNSSKSDRHWKRPLKKAKVSGDDLDGRGSSALGVLNIPPL
        MRHGTYFKDNIHHLVSSAIPPPSQPKLPKNQGSNLGGKEIHLVEAMATTLEKEINEHKDESNSSKSDRHWKRPLKKAKVSGDDLDGRGSSALGVLNIPPL
Subjt:  MRHGTYFKDNIHHLVSSAIPPPSQPKLPKNQGSNLGGKEIHLVEAMATTLEKEINEHKDESNSSKSDRHWKRPLKKAKVSGDDLDGRGSSALGVLNIPPL
KAA0054388.1 hypothetical protein E6C27_scaffold24G001310 [Cucumis melo var. makuwa]2.68e-5284.16Show/hide
Query:  MRHGTYFKDNIHHLVSSAIPPPSQPKLPKNQGSNLGGKEIHLVEAMATTLEKEINEHKDESNSSKSDRHWKRPLKKAKVSGDDLDGRGSSALGVLNIPPL
        MRHGTYF+DNIHHLVSS IPPPSQPKL KN+GSNLGGKEI LVE MA TL++EI EHKDES+SSKSDRHWKRPLKKAKVSGDD DGRGSSA GV N+PPL
Subjt:  MRHGTYFKDNIHHLVSSAIPPPSQPKLPKNQGSNLGGKEIHLVEAMATTLEKEINEHKDESNSSKSDRHWKRPLKKAKVSGDDLDGRGSSALGVLNIPPL

Query:  A
        +
Subjt:  A
KAA0061211.1 hypothetical protein E6C27_scaffold455G00380 [Cucumis melo var. makuwa]5.78e-4976.24Show/hide
Query:  MRHGTYFKDNIHHLVSSAIPPPSQPKLPKNQGSNLGGKEIHLVEAMATTLEKEINEHKDESNSSKSDRHWKRPLKKAKVSGDDLDGRGSSALGVLNIPPL
        MRHGTYF+DN HHLVS+AIPPPSQP+LPKN+GSNLGGKEI LVE MA  LE+E+ EHKDES+SSKSD HWKRPLKKAKVSGD+ DG G S LGV ++P L
Subjt:  MRHGTYFKDNIHHLVSSAIPPPSQPKLPKNQGSNLGGKEIHLVEAMATTLEKEINEHKDESNSSKSDRHWKRPLKKAKVSGDDLDGRGSSALGVLNIPPL

Query:  A
        +
Subjt:  A
KAA0062878.1 hypothetical protein E6C27_scaffold4427G00080 [Cucumis melo var. makuwa]1.20e-5185Show/hide
Query:  RHGTYFKDNIHHLVSSAIPPPSQPKLPKNQGSNLGGKEIHLVEAMATTLEKEINEHKDESNSSKSDRHWKRPLKKAKVSGDDLDGRGSSALGVLNIPPLA
        RH TYF+DNIHHLVSS IPPPSQPKLPKNQGSNL GKEI LVEAMA TLEKE+ EHKDES+SSKSDRHWKRPLKKAKVSGDD DG GSSALGV ++PPL+
Subjt:  RHGTYFKDNIHHLVSSAIPPPSQPKLPKNQGSNLGGKEIHLVEAMATTLEKEINEHKDESNSSKSDRHWKRPLKKAKVSGDDLDGRGSSALGVLNIPPLA
TYK22511.1 hypothetical protein E5676_scaffold387G00090 [Cucumis melo var. makuwa]1.20e-5185Show/hide
Query:  RHGTYFKDNIHHLVSSAIPPPSQPKLPKNQGSNLGGKEIHLVEAMATTLEKEINEHKDESNSSKSDRHWKRPLKKAKVSGDDLDGRGSSALGVLNIPPLA
        RH TYF+DNIHHLVSS IPPPSQPKLPKNQGSNL GKEI LVEAMA TLEKE+ EHKDES+SSKSDRHWKRPLKKAKVSGDD DG GSSALGV ++PPL+
Subjt:  RHGTYFKDNIHHLVSSAIPPPSQPKLPKNQGSNLGGKEIHLVEAMATTLEKEINEHKDESNSSKSDRHWKRPLKKAKVSGDDLDGRGSSALGVLNIPPLA
TrEMBL top hitse value%identityAlignment
A0A5A7V5I2 Uncharacterized protein3.0e-4085Show/hide
Query:  RHGTYFKDNIHHLVSSAIPPPSQPKLPKNQGSNLGGKEIHLVEAMATTLEKEINEHKDESNSSKSDRHWKRPLKKAKVSGDDLDGRGSSALGVLNIPPLA
        RH TYF+DNIHHLVSS IPPPSQPKLPKNQGSNL GKEI LVEAMA TLEKE+ EHKDES+SSKSDRHWKRPLKKAKVSGDD DG GSSALGV ++PPL+
Subjt:  RHGTYFKDNIHHLVSSAIPPPSQPKLPKNQGSNLGGKEIHLVEAMATTLEKEINEHKDESNSSKSDRHWKRPLKKAKVSGDDLDGRGSSALGVLNIPPLA
A0A5D3BCT1 Uncharacterized protein3.5e-4184.16Show/hide
Query:  MRHGTYFKDNIHHLVSSAIPPPSQPKLPKNQGSNLGGKEIHLVEAMATTLEKEINEHKDESNSSKSDRHWKRPLKKAKVSGDDLDGRGSSALGVLNIPPL
        MRHGTYF+DNIHHLVSS IPPPSQPKL KN+GSNLGGKEI LVE MA TL++EI EHKDES+SSKSDRHWKRPLKKAKVSGDD DGRGSSA GV N+PPL
Subjt:  MRHGTYFKDNIHHLVSSAIPPPSQPKLPKNQGSNLGGKEIHLVEAMATTLEKEINEHKDESNSSKSDRHWKRPLKKAKVSGDDLDGRGSSALGVLNIPPL

Query:  A
        +
Subjt:  A
A0A5D3D2A0 PMD domain-containing protein2.1e-3887.1Show/hide
Query:  MRHGTYFKDNIHHLVSSAIPPPSQPKLPKNQGSNLGGKEIHLVEAMATTLEKEINEHKDESNSSKSDRHWKRPLKKAKVSGDDLDGRGSSALG
        MRHGTYF+DNIHHLVSS IPPPSQPKLPKN+G+NLGGKEI LVEAMA TLE+EINEHKDE++SSKSDRHWKRPLKKAKVS DD D RGSSALG
Subjt:  MRHGTYFKDNIHHLVSSAIPPPSQPKLPKNQGSNLGGKEIHLVEAMATTLEKEINEHKDESNSSKSDRHWKRPLKKAKVSGDDLDGRGSSALG
A0A5D3D2V2 Uncharacterized protein9.3e-50100Show/hide
Query:  MRHGTYFKDNIHHLVSSAIPPPSQPKLPKNQGSNLGGKEIHLVEAMATTLEKEINEHKDESNSSKSDRHWKRPLKKAKVSGDDLDGRGSSALGVLNIPPL
        MRHGTYFKDNIHHLVSSAIPPPSQPKLPKNQGSNLGGKEIHLVEAMATTLEKEINEHKDESNSSKSDRHWKRPLKKAKVSGDDLDGRGSSALGVLNIPPL
Subjt:  MRHGTYFKDNIHHLVSSAIPPPSQPKLPKNQGSNLGGKEIHLVEAMATTLEKEINEHKDESNSSKSDRHWKRPLKKAKVSGDDLDGRGSSALGVLNIPPL
A0A5D3DFN2 Uncharacterized protein3.0e-4085Show/hide
Query:  RHGTYFKDNIHHLVSSAIPPPSQPKLPKNQGSNLGGKEIHLVEAMATTLEKEINEHKDESNSSKSDRHWKRPLKKAKVSGDDLDGRGSSALGVLNIPPLA
        RH TYF+DNIHHLVSS IPPPSQPKLPKNQGSNL GKEI LVEAMA TLEKE+ EHKDES+SSKSDRHWKRPLKKAKVSGDD DG GSSALGV ++PPL+
Subjt:  RHGTYFKDNIHHLVSSAIPPPSQPKLPKNQGSNLGGKEIHLVEAMATTLEKEINEHKDESNSSKSDRHWKRPLKKAKVSGDDLDGRGSSALGVLNIPPLA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCACGGGACCTATTTTAAGGATAACATACATCATTTGGTGAGTAGTGCCATTCCTCCCCCTTCACAACCCAAACTACCCAAGAACCAAGGAAGCAACCTGGGTGG
TAAAGAAATTCATCTAGTTGAGGCGATGGCTACTACTCTCGAAAAAGAGATAAATGAACATAAAGATGAGAGCAATAGTAGCAAAAGTGATCGTCATTGGAAGAGACCTT
TGAAGAAAGCAAAGGTATCAGGTGATGATCTCGACGGAAGGGGTTCAAGTGCTTTGGGAGTCCTTAATATTCCACCACTGGCCTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCACGGGACCTATTTTAAGGATAACATACATCATTTGGTGAGTAGTGCCATTCCTCCCCCTTCACAACCCAAACTACCCAAGAACCAAGGAAGCAACCTGGGTGG
TAAAGAAATTCATCTAGTTGAGGCGATGGCTACTACTCTCGAAAAAGAGATAAATGAACATAAAGATGAGAGCAATAGTAGCAAAAGTGATCGTCATTGGAAGAGACCTT
TGAAGAAAGCAAAGGTATCAGGTGATGATCTCGACGGAAGGGGTTCAAGTGCTTTGGGAGTCCTTAATATTCCACCACTGGCCTCGTAA
Protein sequenceShow/hide protein sequence
MRHGTYFKDNIHHLVSSAIPPPSQPKLPKNQGSNLGGKEIHLVEAMATTLEKEINEHKDESNSSKSDRHWKRPLKKAKVSGDDLDGRGSSALGVLNIPPLAS