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IVF0009042 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009042
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCACTA en-spm transposon protein
Genome locationchr05:11290397..11290591
RNA-Seq ExpressionIVF0009042
SyntenyIVF0009042
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056276.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.97e-0459.09Show/hide
Query:  VRRGIPDAVPIGRRKYLFRLDSPDVFSDAVKNVGISLSNVFSIF
        V RGIPDAV +  ++ L RL SPDV  DA KNVGIS  +VF  F
Subjt:  VRRGIPDAVPIGRRKYLFRLDSPDVFSDAVKNVGISLSNVFSIF

KAA0059087.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.42e-0453.49Show/hide
Query:  MANACHGVRRGIPDAVPIGRRKYLFRLDSPDVFSDAVKNVGIS
        + +ACHGV +GIPD V + RR+ L +L SPD   D VKNV  S
Subjt:  MANACHGVRRGIPDAVPIGRRKYLFRLDSPDVFSDAVKNVGIS

KAA0067621.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]9.51e-0456.82Show/hide
Query:  VRRGIPDAVPIGRRKYLFRLDSPDVFSDAVKNVGISLSNVFSIF
        V R I DAV +  ++YLFRL S DV  DA +N GIS S+VFS+F
Subjt:  VRRGIPDAVPIGRRKYLFRLDSPDVFSDAVKNVGISLSNVFSIF

TYK14413.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]9.61e-1057.14Show/hide
Query:  ANACHGVRRGIPDAVPIGRRKYLFRLDSPDVFSDAVKNVGISLSNVFSIFADVFVRREYLSLL
        A+A  GV +G PDA  + RR+ L R  SPDV  D V  VGIS  +V  IFADVFVRREY  LL
Subjt:  ANACHGVRRGIPDAVPIGRRKYLFRLDSPDVFSDAVKNVGISLSNVFSIFADVFVRREYLSLL

TYK29255.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.42e-0453.49Show/hide
Query:  MANACHGVRRGIPDAVPIGRRKYLFRLDSPDVFSDAVKNVGIS
        + +ACHGV +GIPD V + RR+ L +L SPD   D VKNV  S
Subjt:  MANACHGVRRGIPDAVPIGRRKYLFRLDSPDVFSDAVKNVGIS

TrEMBL top hitse value%identityAlignment
A0A5D3CRC0 CACTA en-spm transposon protein3.6e-0757.14Show/hide
Query:  ANACHGVRRGIPDAVPIGRRKYLFRLDSPDVFSDAVKNVGISLSNVFSIFADVFVRREYLSLL
        A+A  GV +G PDA  + RR+ L R  SPDV  D V  VGIS  +V  IFADVFVRREY  LL
Subjt:  ANACHGVRRGIPDAVPIGRRKYLFRLDSPDVFSDAVKNVGISLSNVFSIFADVFVRREYLSLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAACGCATGTCACGGCGTCAGGAGAGGTATTCCCGACGCCGTACCAATAGGGCGTCGGAAATACCTCTTCCGACTCGATTCTCCCGACGTTTTTTCCGACGCCGT
GAAAAACGTCGGCATATCCTTGTCCAATGTATTTTCCATTTTCGCCGACGTTTTTGTGCGTCGGGAGTACCTCAGTCTCTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCAACGCATGTCACGGCGTCAGGAGAGGTATTCCCGACGCCGTACCAATAGGGCGTCGGAAATACCTCTTCCGACTCGATTCTCCCGACGTTTTTTCCGACGCCGT
GAAAAACGTCGGCATATCCTTGTCCAATGTATTTTCCATTTTCGCCGACGTTTTTGTGCGTCGGGAGTACCTCAGTCTCTTGTAG
Protein sequenceShow/hide protein sequence
MANACHGVRRGIPDAVPIGRRKYLFRLDSPDVFSDAVKNVGISLSNVFSIFADVFVRREYLSLL