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IVF0009054 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009054
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTranscription termination factor MTERF5
Genome locationchr10:4550372..4550824
RNA-Seq ExpressionIVF0009054
SyntenyIVF0009054
Gene Ontology termsGO:0006353 - DNA-templated transcription, termination (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsIPR003690 - Transcription termination factor, mitochondrial/chloroplastic
IPR038538 - MTERF superfamily, mitochondrial/chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034109.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa]9.91e-103100Show/hide
Query:  MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNL
        MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNL
Subjt:  MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNL

Query:  LKNKKVALAGWFVQGEREFVEKNVVKHLDEIPNLMDIYRGNDASETKYVS
        LKNKKVALAGWFVQGEREFVEKNVVKHLDEIPNLMDIYRGNDASETKYVS
Subjt:  LKNKKVALAGWFVQGEREFVEKNVVKHLDEIPNLMDIYRGNDASETKYVS

KAA0034119.1 transcription termination factor MTERF8 [Cucumis melo var. makuwa]1.40e-8890Show/hide
Query:  MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNL
        MF YAVFVRLSMSDSTWKKKVTVMKSLGWSE EIFTAFKKDPNYL CSE+KMR+V DFCFNTAKLDPGTVISYPVFFK SV+KRLR RYKVLEVLKVKNL
Subjt:  MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNL

Query:  LKNKKVALAGWFVQGEREFVEKNVVKHLDEIPNLMDIYRGNDASETKYVS
        LKNKK+ALA WF QGEREFV+ NVVKHLDEIPNLMDIYRGNDASETK VS
Subjt:  LKNKKVALAGWFVQGEREFVEKNVVKHLDEIPNLMDIYRGNDASETKYVS

KAA0034120.1 transcription termination factor MTERF9 [Cucumis melo var. makuwa]1.61e-8790Show/hide
Query:  MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNL
        MFV A+  R+ MSDSTW KK+ VMKSLGWSE EIFTAF++ P  LACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNL
Subjt:  MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNL

Query:  LKNKKVALAGWFVQGEREFVEKNVVKHLDEIPNLMDIYRGNDASETKYVS
        LKNKKVALAGWFVQGEREFVEKNVVKHLDEIPNLMDIYRGNDASETKYVS
Subjt:  LKNKKVALAGWFVQGEREFVEKNVVKHLDEIPNLMDIYRGNDASETKYVS

KAA0034157.1 transcription termination factor MTERF8 [Cucumis melo var. makuwa]2.81e-8888.67Show/hide
Query:  MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNL
        MFVYAV VRLSMSDSTWKKK+TVMKSLGWSE EIFTAFKKDP YL CSEEKMR+V DFCFNTAKLDPGTVISYP+FFKLSV+KRLRLRYKVLEVLKVKNL
Subjt:  MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNL

Query:  LKNKKVALAGWFVQGEREFVEKNVVKHLDEIPNLMDIYRGNDASETKYVS
        LKN+K+ L GWF+QGEREFV+ NVVKHLDEIPNLMDIYRGNDASETK VS
Subjt:  LKNKKVALAGWFVQGEREFVEKNVVKHLDEIPNLMDIYRGNDASETKYVS

XP_008466910.1 PREDICTED: uncharacterized protein LOC103504258 [Cucumis melo]1.60e-9190Show/hide
Query:  MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNL
        MF YAVFVRLSMSDSTWKKKVTVMKSLGWSE EIFTAFKKDPNYL CSE+KMR+V DFCFNTAKLDPGTVISYPVFFK SV+KRLR RYKVLEVLKVKNL
Subjt:  MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNL

Query:  LKNKKVALAGWFVQGEREFVEKNVVKHLDEIPNLMDIYRGNDASETKYVS
        LKNKK+ALA WF QGEREFV+ NVVKHLDEIPNLMDIYRGNDASETK VS
Subjt:  LKNKKVALAGWFVQGEREFVEKNVVKHLDEIPNLMDIYRGNDASETKYVS

TrEMBL top hitse value%identityAlignment
A0A1S3CSA2 uncharacterized protein LOC1035042584.1e-7090Show/hide
Query:  MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNL
        MF YAVFVRLSMSDSTWKKKVTVMKSLGWSE EIFTAFKKDPNYL CSE+KMR+V DFCFNTAKLDPGTVISYPVFFK SV+KRLR RYKVLEVLKVKNL
Subjt:  MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNL

Query:  LKNKKVALAGWFVQGEREFVEKNVVKHLDEIPNLMDIYRGNDASETKYVS
        LKNKK+ALA WF QGEREFV+ NVVKHLDEIPNLMDIYRGNDASETK VS
Subjt:  LKNKKVALAGWFVQGEREFVEKNVVKHLDEIPNLMDIYRGNDASETKYVS

A0A5A7SY07 Transcription termination factor MTERF87.0e-7088.67Show/hide
Query:  MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNL
        MFVYAV VRLSMSDSTWKKK+TVMKSLGWSE EIFTAFKKDP YL CSEEKMR+V DFCFNTAKLDPGTVISYP+FFKLSV+KRLRLRYKVLEVLKVKNL
Subjt:  MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNL

Query:  LKNKKVALAGWFVQGEREFVEKNVVKHLDEIPNLMDIYRGNDASETKYVS
        LKN+K+ L GWF+QGEREFV+ NVVKHLDEIPNLMDIYRGNDASETK VS
Subjt:  LKNKKVALAGWFVQGEREFVEKNVVKHLDEIPNLMDIYRGNDASETKYVS

A0A5A7SYC3 Transcription termination factor MTERF84.1e-7090Show/hide
Query:  MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNL
        MF YAVFVRLSMSDSTWKKKVTVMKSLGWSE EIFTAFKKDPNYL CSE+KMR+V DFCFNTAKLDPGTVISYPVFFK SV+KRLR RYKVLEVLKVKNL
Subjt:  MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNL

Query:  LKNKKVALAGWFVQGEREFVEKNVVKHLDEIPNLMDIYRGNDASETKYVS
        LKNKK+ALA WF QGEREFV+ NVVKHLDEIPNLMDIYRGNDASETK VS
Subjt:  LKNKKVALAGWFVQGEREFVEKNVVKHLDEIPNLMDIYRGNDASETKYVS

A0A5D3CV71 Transcription termination factor MTERF58.2e-79100Show/hide
Query:  MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNL
        MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNL
Subjt:  MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNL

Query:  LKNKKVALAGWFVQGEREFVEKNVVKHLDEIPNLMDIYRGNDASETKYVS
        LKNKKVALAGWFVQGEREFVEKNVVKHLDEIPNLMDIYRGNDASETKYVS
Subjt:  LKNKKVALAGWFVQGEREFVEKNVVKHLDEIPNLMDIYRGNDASETKYVS

A0A5D3CWQ9 Transcription termination factor MTERF92.7e-6990Show/hide
Query:  MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNL
        MFV A+  R+ MSDSTW KK+ VMKSLGWSE EIFTAF++ P  LACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNL
Subjt:  MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNL

Query:  LKNKKVALAGWFVQGEREFVEKNVVKHLDEIPNLMDIYRGNDASETKYVS
        LKNKKVALAGWFVQGEREFVEKNVVKHLDEIPNLMDIYRGNDASETKYVS
Subjt:  LKNKKVALAGWFVQGEREFVEKNVVKHLDEIPNLMDIYRGNDASETKYVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21150.1 Mitochondrial transcription termination factor family protein5.9e-1327.86Show/hide
Query:  FVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLL
        FV+A+      S+S  ++K  + +  GWS+ +   A  + PN +  S+EK+    ++  N   L    +++ PV   LS+ KR++ R +V+ +L  K L+
Subjt:  FVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLL

Query:  KNKKVALAGWFVQGEREFVEKNVVKHLDEIPNLMDIYRGN
        K + +           EF++K V+K+ DE+P L+  +  N
Subjt:  KNKKVALAGWFVQGEREFVEKNVVKHLDEIPNLMDIYRGN

AT1G61970.1 Mitochondrial transcription termination factor family protein9.8e-0825.42Show/hide
Query:  FVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKM-----------------------------------RNVTDFCFNTAKLD
        FV A+ V   M++ T ++KV + KSLG+   +++++FKK P  L  SE+KM                                   +  T+F        
Subjt:  FVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKM-----------------------------------RNVTDFCFNTAKLD

Query:  PGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAGWFVQGEREFVEKNVVKHLDE--IPNLMDIYRGN
           V+S P  F  S+ KR+  R  V++ L  K L++N+  +++   +  ++ F+ + V  H+D+  +  LM IYR +
Subjt:  PGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAGWFVQGEREFVEKNVVKHLDE--IPNLMDIYRGN

AT1G62010.1 Mitochondrial transcription termination factor family protein5.7e-0826.37Show/hide
Query:  FVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRN-----------------------------------VTDFCFNTAKLD
        FV+A+ +   MSD T ++K+ V +S+G+S ++++  FKK P  L  SE+K+ N                                    T+F        
Subjt:  FVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRN-----------------------------------VTDFCFNTAKLD

Query:  PGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAGWFVQGEREFVEKNVVKHLDE--IPNLMDIYRGNDASET
           V S P     S+ KR   R  V++VL  K LL+++   ++         F+   V KH D+  +  LM I+ GN  S T
Subjt:  PGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAGWFVQGEREFVEKNVVKHLDE--IPNLMDIYRGNDASET

AT5G07900.1 Mitochondrial transcription termination factor family protein3.7e-1535.71Show/hide
Query:  STWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAGWFVQ
        S W K   V +  GWSE++I  AFKK P+ +  SE K+    ++  N   + P ++   PV    S+ KR+  R  V +VL V N L  +  +L    V 
Subjt:  STWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAGWFVQ

Query:  GEREFVEKNVVKHLDEIPNLMDIYRG
         E+ F+EK V+K+ +E+P LM++Y G
Subjt:  GEREFVEKNVVKHLDEIPNLMDIYRG

AT5G64950.1 Mitochondrial transcription termination factor family protein5.0e-1232.84Show/hide
Query:  MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNL
        M V+AV    S+S+ T+ +KV +  + G+SE+EI    ++ P  + CSE+K+    +F      L+   +   P     ++ KR+  R KVL++L+ K L
Subjt:  MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNL

Query:  L---KNKKVALAGWFVQGEREFVEKNVVKHLDEI
        L   + KK  + G     E  F+EK VV+  DEI
Subjt:  L---KNKKVALAGWFVQGEREFVEKNVVKHLDEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTTTATGCAGTTTTTGTAAGGCTTTCAATGAGTGATTCAACTTGGAAGAAGAAAGTAACTGTTATGAAGAGTTTAGGATGGTCTGAGAATGAGATTTTTACAGC
ATTTAAGAAAGATCCAAATTATTTAGCTTGTTCAGAGGAGAAAATGAGGAATGTTACAGATTTCTGTTTCAACACTGCAAAGTTGGATCCTGGAACCGTAATTTCTTACC
CTGTGTTCTTCAAGTTGTCGGTCAACAAGCGGCTCCGACTGAGGTACAAAGTTCTCGAGGTTTTGAAGGTGAAAAATCTCCTCAAGAACAAAAAGGTTGCTCTTGCTGGG
TGGTTTGTGCAAGGGGAGAGAGAATTTGTGGAGAAGAATGTTGTTAAGCATTTGGATGAAATCCCAAATCTGATGGATATATACCGGGGCAATGACGCATCTGAAACCAA
ATATGTTTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTGTTTATGCAGTTTTTGTAAGGCTTTCAATGAGTGATTCAACTTGGAAGAAGAAAGTAACTGTTATGAAGAGTTTAGGATGGTCTGAGAATGAGATTTTTACAGC
ATTTAAGAAAGATCCAAATTATTTAGCTTGTTCAGAGGAGAAAATGAGGAATGTTACAGATTTCTGTTTCAACACTGCAAAGTTGGATCCTGGAACCGTAATTTCTTACC
CTGTGTTCTTCAAGTTGTCGGTCAACAAGCGGCTCCGACTGAGGTACAAAGTTCTCGAGGTTTTGAAGGTGAAAAATCTCCTCAAGAACAAAAAGGTTGCTCTTGCTGGG
TGGTTTGTGCAAGGGGAGAGAGAATTTGTGGAGAAGAATGTTGTTAAGCATTTGGATGAAATCCCAAATCTGATGGATATATACCGGGGCAATGACGCATCTGAAACCAA
ATATGTTTCATAG
Protein sequenceShow/hide protein sequence
MFVYAVFVRLSMSDSTWKKKVTVMKSLGWSENEIFTAFKKDPNYLACSEEKMRNVTDFCFNTAKLDPGTVISYPVFFKLSVNKRLRLRYKVLEVLKVKNLLKNKKVALAG
WFVQGEREFVEKNVVKHLDEIPNLMDIYRGNDASETKYVS