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IVF0009072 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009072
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr04:21897337..21897846
RNA-Seq ExpressionIVF0009072
SyntenyIVF0009072
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048001.1 putative clathrin assembly protein [Cucumis melo var. makuwa]7.90e-1768.33Show/hide
Query:  MCSHWFLRPDERSPQVGRALTIFSIVSGCTLVLPPRSSLLDLFLEETGEGRFQEYRLESS
        M S WFL  DERS  VGRA+ IFSIV+GCTLVLPP +SL DL+  +TGEGR QE RL+SS
Subjt:  MCSHWFLRPDERSPQVGRALTIFSIVSGCTLVLPPRSSLLDLFLEETGEGRFQEYRLESS

KAA0059490.1 uncharacterized protein E6C27_scaffold242G002380 [Cucumis melo var. makuwa]9.33e-1139.17Show/hide
Query:  SIVPGCTLVLPPMSSLPDLFLRETRDGSCQEFRSECSEYEPLVRSTYDQHMTKKPPQNRFFLRRTHEVLELSPFPEMCSHWFLRPDERSPQVGRALTIFS
        SIV GCTLVLPPMSSL DL+  +  +  C +                                              C   FL  ++RSP VGRAL IF 
Subjt:  SIVPGCTLVLPPMSSLPDLFLRETRDGSCQEFRSECSEYEPLVRSTYDQHMTKKPPQNRFFLRRTHEVLELSPFPEMCSHWFLRPDERSPQVGRALTIFS

Query:  IVSGCTLVLPPRSSLLDLFL
        IVSGCTLVLPP SSL DL++
Subjt:  IVSGCTLVLPPRSSLLDLFL

KAA0062674.1 uncharacterized protein E6C27_scaffold79G001940 [Cucumis melo var. makuwa]1.52e-1152.44Show/hide
Query:  FLRRTHEVLELSPFPEMCSH--WFLRPDERSPQVGRALTIFSIVSGCTLVLPPRSSLLDLFLEETGEGRFQEYRLESSKYEP
        FL R  +VLELSPFP +  H  WFL PDERS  VG ++    IV G  +VLP  SSL DL+L +T +G +QE  L+SS++EP
Subjt:  FLRRTHEVLELSPFPEMCSH--WFLRPDERSPQVGRALTIFSIVSGCTLVLPPRSSLLDLFLEETGEGRFQEYRLESSKYEP

TYJ98799.1 gag/pol protein [Cucumis melo var. makuwa]2.54e-2345.04Show/hide
Query:  ALGFFSIVPGCTLVLPPMSSLPDLFLRETRDGSCQEFRSECSEYEPLVRSTYDQHMTKKPPQNRFFLRRTHEVLELSPFPEMCSHWFLRPDERSPQVGRA
        AL  FSIV GCTLV+PP SS P+L+ ++  +G CQ+ R + SEYE    +                              EM   WFL PDERSP V  A
Subjt:  ALGFFSIVPGCTLVLPPMSSLPDLFLRETRDGSCQEFRSECSEYEPLVRSTYDQHMTKKPPQNRFFLRRTHEVLELSPFPEMCSHWFLRPDERSPQVGRA

Query:  LTIFSIVSGCTLVLPPRSSLLDLFLEETGEG
        L IF+IV GCTLVLPP SSL DL+  +T EG
Subjt:  LTIFSIVSGCTLVLPPRSSLLDLFLEETGEG

TYK01208.1 uncharacterized protein E5676_scaffold2044G00560 [Cucumis melo var. makuwa]3.64e-1152.44Show/hide
Query:  FLRRTHEVLELSPFPEMCSH--WFLRPDERSPQVGRALTIFSIVSGCTLVLPPRSSLLDLFLEETGEGRFQEYRLESSKYEP
        FL R  +VLELSPFP +  H  WFL PDERS  VG ++    IV G  +VLP  SSL DL+L +T +G +QE  L+SS++EP
Subjt:  FLRRTHEVLELSPFPEMCSH--WFLRPDERSPQVGRALTIFSIVSGCTLVLPPRSSLLDLFLEETGEGRFQEYRLESSKYEP

TrEMBL top hitse value%identityAlignment
A0A5A7U368 Putative clathrin assembly protein1.2e-1268.33Show/hide
Query:  MCSHWFLRPDERSPQVGRALTIFSIVSGCTLVLPPRSSLLDLFLEETGEGRFQEYRLESS
        M S WFL  DERS  VGRA+ IFSIV+GCTLVLPP +SL DL+  +TGEGR QE RL+SS
Subjt:  MCSHWFLRPDERSPQVGRALTIFSIVSGCTLVLPPRSSLLDLFLEETGEGRFQEYRLESS

A0A5A7V5Z6 Uncharacterized protein1.6e-0952.44Show/hide
Query:  FLRRTHEVLELSPFPEMCSH--WFLRPDERSPQVGRALTIFSIVSGCTLVLPPRSSLLDLFLEETGEGRFQEYRLESSKYEP
        FL R  +VLELSPFP +  H  WFL PDERS  VG ++    IV G  +VLP  SSL DL+L +T +G +QE  L+SS++EP
Subjt:  FLRRTHEVLELSPFPEMCSH--WFLRPDERSPQVGRALTIFSIVSGCTLVLPPRSSLLDLFLEETGEGRFQEYRLESSKYEP

A0A5D3BII7 Gag/pol protein3.1e-1845.04Show/hide
Query:  ALGFFSIVPGCTLVLPPMSSLPDLFLRETRDGSCQEFRSECSEYEPLVRSTYDQHMTKKPPQNRFFLRRTHEVLELSPFPEMCSHWFLRPDERSPQVGRA
        AL  FSIV GCTLV+PP SS P+L+ ++  +G CQ+ R + SEYE   +S+ + H                              WFL PDERSP V  A
Subjt:  ALGFFSIVPGCTLVLPPMSSLPDLFLRETRDGSCQEFRSECSEYEPLVRSTYDQHMTKKPPQNRFFLRRTHEVLELSPFPEMCSHWFLRPDERSPQVGRA

Query:  LTIFSIVSGCTLVLPPRSSLLDLFLEETGEG
        L IF+IV GCTLVLPP SSL DL+  +T EG
Subjt:  LTIFSIVSGCTLVLPPRSSLLDLFLEETGEG

A0A5D3BQ75 Uncharacterized protein3.5e-0952.44Show/hide
Query:  FLRRTHEVLELSPFPEMCSH--WFLRPDERSPQVGRALTIFSIVSGCTLVLPPRSSLLDLFLEETGEGRFQEYRLESSKYEP
        FL R  +VLELSPFP +  H  WFL PDERS  VG ++    IV G  +VLP  SSL DL+L +T +G +QE  L+SS++EP
Subjt:  FLRRTHEVLELSPFPEMCSH--WFLRPDERSPQVGRALTIFSIVSGCTLVLPPRSSLLDLFLEETGEGRFQEYRLESSKYEP

A0A5D3DC18 Uncharacterized protein7.7e-0937.33Show/hide
Query:  ALGFFSIVPGCTLVLPPMSSLPDLFLRETRDGSCQEFRSECSEYEPLVRSTYDQHMTKKPPQNRFFLRRTHEVLELSPFPEMCSHW--FLRPDERSPQVG
        AL  F IV GCTLVLPP SSLPDL++     G  + F +               H+  +      F  +T EVL+LS F  +  H+   L P++ SP VG
Subjt:  ALGFFSIVPGCTLVLPPMSSLPDLFLRETRDGSCQEFRSECSEYEPLVRSTYDQHMTKKPPQNRFFLRRTHEVLELSPFPEMCSHW--FLRPDERSPQVG

Query:  RA--------------------LTIFSIVSGCTLVLPPRSSLLDLFLEET
        +A                    LTIFSIVSGCTLV  P S L +L+  +T
Subjt:  RA--------------------LTIFSIVSGCTLVLPPRSSLLDLFLEET

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGTTCGCCACAAGTTTCTGAGTGCATTGGGCTTCTTTTCGATCGTTCCGGGTTGCACCTTAGTTCTCCCTCCAATGAGCTCGCTTCCCGACCTATTCCTCAGGGA
AACACGTGATGGAAGCTGCCAGGAATTCAGATCAGAGTGCTCAGAGTATGAGCCACTCGTTCGAAGCACTTATGACCAACACATGACAAAGAAACCACCGCAGAACCGCT
TTTTCCTGAGACGAACACATGAAGTCCTTGAGCTTAGCCCGTTTCCCGAAATGTGTTCTCATTGGTTTCTGAGACCGGACGAGCGTTCGCCACAAGTTGGGAGAGCATTG
ACCATCTTTTCGATTGTTTCGGGTTGCACCTTAGTTCTCCCTCCAAGGAGCTCGCTTCTCGACCTATTCCTCGAGGAAACGGGTGAGGGACGATTCCAGGAGTATAGATT
GGAGTCTTCGAAGTATGAGCCAATTGTTCGAAGCACTTATGGCCAACAGAGGACAAATAAACCGCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCGTTCGCCACAAGTTTCTGAGTGCATTGGGCTTCTTTTCGATCGTTCCGGGTTGCACCTTAGTTCTCCCTCCAATGAGCTCGCTTCCCGACCTATTCCTCAGGGA
AACACGTGATGGAAGCTGCCAGGAATTCAGATCAGAGTGCTCAGAGTATGAGCCACTCGTTCGAAGCACTTATGACCAACACATGACAAAGAAACCACCGCAGAACCGCT
TTTTCCTGAGACGAACACATGAAGTCCTTGAGCTTAGCCCGTTTCCCGAAATGTGTTCTCATTGGTTTCTGAGACCGGACGAGCGTTCGCCACAAGTTGGGAGAGCATTG
ACCATCTTTTCGATTGTTTCGGGTTGCACCTTAGTTCTCCCTCCAAGGAGCTCGCTTCTCGACCTATTCCTCGAGGAAACGGGTGAGGGACGATTCCAGGAGTATAGATT
GGAGTCTTCGAAGTATGAGCCAATTGTTCGAAGCACTTATGGCCAACAGAGGACAAATAAACCGCAGTAG
Protein sequenceShow/hide protein sequence
MSVRHKFLSALGFFSIVPGCTLVLPPMSSLPDLFLRETRDGSCQEFRSECSEYEPLVRSTYDQHMTKKPPQNRFFLRRTHEVLELSPFPEMCSHWFLRPDERSPQVGRAL
TIFSIVSGCTLVLPPRSSLLDLFLEETGEGRFQEYRLESSKYEPIVRSTYGQQRTNKPQ