; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0009073 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009073
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr06:4119414..4119581
RNA-Seq ExpressionIVF0009073
SyntenyIVF0009073
Gene Ontology termsGO:0016788 - hydrolase activity, acting on ester bonds (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035723.1 retrotransposon protein [Cucumis melo var. makuwa]4.37e-2381.48Show/hide
Query:  MIYYDDVDDVDEGDSAYAMTTATEDIHYIETTNEWSQWCDELAESMFIDWQLRN
        M Y DDVD+VDEGDS YAMTT TEDI+YIE TNEWSQW DELAESMF DWQL N
Subjt:  MIYYDDVDDVDEGDSAYAMTTATEDIHYIETTNEWSQWCDELAESMFIDWQLRN

KAA0054051.1 retrotransposon protein [Cucumis melo var. makuwa]2.02e-2687.04Show/hide
Query:  MIYYDDVDDVDEGDSAYAMTTATEDIHYIETTNEWSQWCDELAESMFIDWQLRN
        M Y DD+DDVDEGDSAYA TTA+EDIHYIETTNEWSQW DELAESMF DWQLRN
Subjt:  MIYYDDVDDVDEGDSAYAMTTATEDIHYIETTNEWSQWCDELAESMFIDWQLRN

KAA0060171.1 retrotransposon protein [Cucumis melo var. makuwa]3.00e-2389.36Show/hide
Query:  DDVDEGDSAYAMTTATEDIHYIETTNEWSQWCDELAESMFIDWQLRN
        DDVDEGDS YA TTA+EDIHYIETTNEWSQWCD+LA+SMFIDWQLRN
Subjt:  DDVDEGDSAYAMTTATEDIHYIETTNEWSQWCDELAESMFIDWQLRN

TYK04228.1 retrotransposon protein [Cucumis melo var. makuwa]6.56e-2378.18Show/hide
Query:  MIYYDDVDDVDEGDSAYAMTTATEDIHYIETTNEWSQWCDELAESMFIDWQLRNT
        M Y D+VDD DEGDS YA TTA+EDI YIETTNEWSQW D+LAESMF +WQLRNT
Subjt:  MIYYDDVDDVDEGDSAYAMTTATEDIHYIETTNEWSQWCDELAESMFIDWQLRNT

XP_016901894.1 PREDICTED: uncharacterized protein LOC107991461 [Cucumis melo]2.49e-32100Show/hide
Query:  MIYYDDVDDVDEGDSAYAMTTATEDIHYIETTNEWSQWCDELAESMFIDWQLRNT
        MIYYDDVDDVDEGDSAYAMTTATEDIHYIETTNEWSQWCDELAESMFIDWQLRNT
Subjt:  MIYYDDVDDVDEGDSAYAMTTATEDIHYIETTNEWSQWCDELAESMFIDWQLRNT

TrEMBL top hitse value%identityAlignment
A0A1S4E0Z9 uncharacterized protein LOC1079914612.8e-24100Show/hide
Query:  MIYYDDVDDVDEGDSAYAMTTATEDIHYIETTNEWSQWCDELAESMFIDWQLRNT
        MIYYDDVDDVDEGDSAYAMTTATEDIHYIETTNEWSQWCDELAESMFIDWQLRNT
Subjt:  MIYYDDVDDVDEGDSAYAMTTATEDIHYIETTNEWSQWCDELAESMFIDWQLRNT

A0A5A7VK86 Retrotransposon protein7.3e-1781.48Show/hide
Query:  MIYYDDVDDVDEGDSAYAMTTATEDIHYIETTNEWSQWCDELAESMFIDWQLRN
        M Y +DVDDVDEGDS YA TTA+EDIHYIETTNEWSQW DEL ESMF DWQL N
Subjt:  MIYYDDVDDVDEGDSAYAMTTATEDIHYIETTNEWSQWCDELAESMFIDWQLRN

A0A5D3BDZ0 Retrotransposon protein1.0e-1887.04Show/hide
Query:  MIYYDDVDDVDEGDSAYAMTTATEDIHYIETTNEWSQWCDELAESMFIDWQLRN
        M Y DD+DDVDEGDSAYA TTA+EDIHYIETTNEWSQW DELAESMF DWQLRN
Subjt:  MIYYDDVDDVDEGDSAYAMTTATEDIHYIETTNEWSQWCDELAESMFIDWQLRN

A0A5D3CUG9 Retrotransposon protein7.3e-1783.33Show/hide
Query:  MIYYDDVDDVDEGDSAYAMTTATEDIHYIETTNEWSQWCDELAESMFIDWQLRN
        M Y  DVDDVDEGDS YA T A+EDIHYIETTNEWSQW DELAESMF DWQLRN
Subjt:  MIYYDDVDDVDEGDSAYAMTTATEDIHYIETTNEWSQWCDELAESMFIDWQLRN

A0A5D3DAU7 Retrotransposon protein1.1e-1783.33Show/hide
Query:  MIYYDDVDDVDEGDSAYAMTTATEDIHYIETTNEWSQWCDELAESMFIDWQLRN
        M YYDDVDD DEGDS YAMTTA+EDI YIETTNEWSQW D+LAESMF +WQLRN
Subjt:  MIYYDDVDDVDEGDSAYAMTTATEDIHYIETTNEWSQWCDELAESMFIDWQLRN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATATTACGACGACGTTGATGACGTGGATGAGGGGGACTCCGCATACGCGATGACCACCGCTACAGAAGACATTCACTACATTGAGACGACAAACGAGTGGTCTCA
GTGGTGCGACGAACTAGCTGAATCGATGTTCATAGATTGGCAGTTGCGTAACACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATATATTACGACGACGTTGATGACGTGGATGAGGGGGACTCCGCATACGCGATGACCACCGCTACAGAAGACATTCACTACATTGAGACGACAAACGAGTGGTCTCA
GTGGTGCGACGAACTAGCTGAATCGATGTTCATAGATTGGCAGTTGCGTAACACTTAG
Protein sequenceShow/hide protein sequence
MIYYDDVDDVDEGDSAYAMTTATEDIHYIETTNEWSQWCDELAESMFIDWQLRNT