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IVF0009075 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009075
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr09:16518278..16518703
RNA-Seq ExpressionIVF0009075
SyntenyIVF0009075
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050190.1 retrotransposon protein [Cucumis melo var. makuwa]9.38e-93100Show/hide
Query:  MLDGNEEFPSMYSQGIDMSQEDVRASRPSHTSKGRIRSSGSKRKRESQQKGEIEVIHMAIECTNDQLRTIAEWPARALANDTHVRQELLRLLHVMPELTS
        MLDGNEEFPSMYSQGIDMSQEDVRASRPSHTSKGRIRSSGSKRKRESQQKGEIEVIHMAIECTNDQLRTIAEWPARALANDTHVRQELLRLLHVMPELTS
Subjt:  MLDGNEEFPSMYSQGIDMSQEDVRASRPSHTSKGRIRSSGSKRKRESQQKGEIEVIHMAIECTNDQLRTIAEWPARALANDTHVRQELLRLLHVMPELTS

Query:  LDRVLCQRHLLSRMDDMRGFIQMIDDERQNFCRVLLGDISR
        LDRVLCQRHLLSRMDDMRGFIQMIDDERQNFCRVLLGDISR
Subjt:  LDRVLCQRHLLSRMDDMRGFIQMIDDERQNFCRVLLGDISR

KAA0050806.1 retrotransposon protein [Cucumis melo var. makuwa]6.81e-6473.05Show/hide
Query:  MLDGNEEFPSMYSQGIDMSQEDVRASRPSHTSKGRIRSSGSKRKRESQQKGEIEVIHMAIECTNDQLRTIAEWPARALANDTHVRQELLRLLHVMPELTS
        M DGNEEF S+YSQGIDMSQEDV AS+P+HTS  R RSS  KRKR SQQKGEI+VIHMA++C NDQL+ I EW ARALAN+THV QE +RLL  M EL++
Subjt:  MLDGNEEFPSMYSQGIDMSQEDVRASRPSHTSKGRIRSSGSKRKRESQQKGEIEVIHMAIECTNDQLRTIAEWPARALANDTHVRQELLRLLHVMPELTS

Query:  LDRVLCQRHLLSRMDDMRGFIQMIDDERQNFCRVLLGDISR
        LDR LCQRHL+S MDDM GF+QM +DERQNFCRVLL D SR
Subjt:  LDRVLCQRHLLSRMDDMRGFIQMIDDERQNFCRVLLGDISR

KAA0065782.1 retrotransposon protein [Cucumis melo var. makuwa]1.84e-6272.66Show/hide
Query:  DGNEEFPSMYSQGIDMSQEDVRASRPSHTSKGRIRSSGSKRKRESQQKGEIEVIHMAIECTNDQLRTIAEWPARALANDTHVRQELLRLLHVMPELTSLD
        DGN+EFPS+Y+QGI+MSQEDVRAS+PS   +GR+ SSGSKRKR SQQ+ E+EVI+MA ECTNDQL+ +AEWPARALAND HVRQ+   +L  MPELT LD
Subjt:  DGNEEFPSMYSQGIDMSQEDVRASRPSHTSKGRIRSSGSKRKRESQQKGEIEVIHMAIECTNDQLRTIAEWPARALANDTHVRQELLRLLHVMPELTSLD

Query:  RVLCQRHLLSRMDDMRGFIQMIDDERQNFCRVLLGDISR
        R L QRHLLSRMDD+RGFIQM DDER++FC V+L DISR
Subjt:  RVLCQRHLLSRMDDMRGFIQMIDDERQNFCRVLLGDISR

KAA0067987.1 retrotransposon protein [Cucumis melo var. makuwa]1.26e-6070.21Show/hide
Query:  MLDGNEEFPSMYSQGIDMSQEDVRASRPSHTSKGRIRSSGSKRKRESQQKGEIEVIHMAIECTNDQLRTIAEWPARALANDTHVRQELLRLLHVMPELTS
        M DGN++FPS+YSQGID+SQ+DVRASRPS  S+GR RSSGSKRKR SQ+  E+E IH+A++ TN+QLR IAEWP R LAND HVR E  R+L  MPELTS
Subjt:  MLDGNEEFPSMYSQGIDMSQEDVRASRPSHTSKGRIRSSGSKRKRESQQKGEIEVIHMAIECTNDQLRTIAEWPARALANDTHVRQELLRLLHVMPELTS

Query:  LDRVLCQRHLLSRMDDMRGFIQMIDDERQNFCRVLLGDISR
        LDR L QRHLLSRMDD+RGF+ M++DER+ FCRVLL DI R
Subjt:  LDRVLCQRHLLSRMDDMRGFIQMIDDERQNFCRVLLGDISR

TYK30971.1 retrotransposon protein [Cucumis melo var. makuwa]2.35e-6069.5Show/hide
Query:  MLDGNEEFPSMYSQGIDMSQEDVRASRPSHTSKGRIRSSGSKRKRESQQKGEIEVIHMAIECTNDQLRTIAEWPARALANDTHVRQELLRLLHVMPELTS
        M DGNE+F S+YSQG+D+SQ+DVRASRPS  S+GR RSSGSKRKR SQ+  ++E IH+A++ TN+QLR IAEWPAR LAND HVR E  R+L  MPELTS
Subjt:  MLDGNEEFPSMYSQGIDMSQEDVRASRPSHTSKGRIRSSGSKRKRESQQKGEIEVIHMAIECTNDQLRTIAEWPARALANDTHVRQELLRLLHVMPELTS

Query:  LDRVLCQRHLLSRMDDMRGFIQMIDDERQNFCRVLLGDISR
        LDR L QRHLLSRMDD+RGF+ M +DER+ FCRVLL DI R
Subjt:  LDRVLCQRHLLSRMDDMRGFIQMIDDERQNFCRVLLGDISR

TrEMBL top hitse value%identityAlignment
A0A5A7U4I8 Retrotransposon protein2.0e-71100Show/hide
Query:  MLDGNEEFPSMYSQGIDMSQEDVRASRPSHTSKGRIRSSGSKRKRESQQKGEIEVIHMAIECTNDQLRTIAEWPARALANDTHVRQELLRLLHVMPELTS
        MLDGNEEFPSMYSQGIDMSQEDVRASRPSHTSKGRIRSSGSKRKRESQQKGEIEVIHMAIECTNDQLRTIAEWPARALANDTHVRQELLRLLHVMPELTS
Subjt:  MLDGNEEFPSMYSQGIDMSQEDVRASRPSHTSKGRIRSSGSKRKRESQQKGEIEVIHMAIECTNDQLRTIAEWPARALANDTHVRQELLRLLHVMPELTS

Query:  LDRVLCQRHLLSRMDDMRGFIQMIDDERQNFCRVLLGDISR
        LDRVLCQRHLLSRMDDMRGFIQMIDDERQNFCRVLLGDISR
Subjt:  LDRVLCQRHLLSRMDDMRGFIQMIDDERQNFCRVLLGDISR

A0A5A7U9D5 Retrotransposon protein3.7e-4973.05Show/hide
Query:  MLDGNEEFPSMYSQGIDMSQEDVRASRPSHTSKGRIRSSGSKRKRESQQKGEIEVIHMAIECTNDQLRTIAEWPARALANDTHVRQELLRLLHVMPELTS
        M DGNEEF S+YSQGIDMSQEDV AS+P+HTS  R RSS  KRKR SQQKGEI+VIHMA++C NDQL+ I EW ARALAN+THV QE +RLL  M EL++
Subjt:  MLDGNEEFPSMYSQGIDMSQEDVRASRPSHTSKGRIRSSGSKRKRESQQKGEIEVIHMAIECTNDQLRTIAEWPARALANDTHVRQELLRLLHVMPELTS

Query:  LDRVLCQRHLLSRMDDMRGFIQMIDDERQNFCRVLLGDISR
        LDR LCQRHL+S MDDM GF+QM +DERQNFCRVLL D SR
Subjt:  LDRVLCQRHLLSRMDDMRGFIQMIDDERQNFCRVLLGDISR

A0A5A7VL88 Retrotransposon protein1.6e-4770.21Show/hide
Query:  MLDGNEEFPSMYSQGIDMSQEDVRASRPSHTSKGRIRSSGSKRKRESQQKGEIEVIHMAIECTNDQLRTIAEWPARALANDTHVRQELLRLLHVMPELTS
        M DGN++FPS+YSQGID+SQ+DVRASRPS  S+GR RSSGSKRKR SQ+  E+E IH+A++ TN+QLR IAEWP R LAND HVR E  R+L  MPELTS
Subjt:  MLDGNEEFPSMYSQGIDMSQEDVRASRPSHTSKGRIRSSGSKRKRESQQKGEIEVIHMAIECTNDQLRTIAEWPARALANDTHVRQELLRLLHVMPELTS

Query:  LDRVLCQRHLLSRMDDMRGFIQMIDDERQNFCRVLLGDISR
        LDR L QRHLLSRMDD+RGF+ M++DER+ FCRVLL DI R
Subjt:  LDRVLCQRHLLSRMDDMRGFIQMIDDERQNFCRVLLGDISR

A0A5D3BD15 Retrotransposon protein1.4e-4872.66Show/hide
Query:  DGNEEFPSMYSQGIDMSQEDVRASRPSHTSKGRIRSSGSKRKRESQQKGEIEVIHMAIECTNDQLRTIAEWPARALANDTHVRQELLRLLHVMPELTSLD
        DGN+EFPS+Y+QGI+MSQEDVRAS+PS   +GR+ SSGSKRKR SQQ+ E+EVI+MA ECTNDQL+ +AEWPARALAND HVRQ+   +L  MPELT LD
Subjt:  DGNEEFPSMYSQGIDMSQEDVRASRPSHTSKGRIRSSGSKRKRESQQKGEIEVIHMAIECTNDQLRTIAEWPARALANDTHVRQELLRLLHVMPELTSLD

Query:  RVLCQRHLLSRMDDMRGFIQMIDDERQNFCRVLLGDISR
        R L QRHLLSRMDD+RGFIQM DDER++FC V+L DISR
Subjt:  RVLCQRHLLSRMDDMRGFIQMIDDERQNFCRVLLGDISR

A0A5D3BT72 Retrotransposon protein7.8e-4771.63Show/hide
Query:  MLDGNEEFPSMYSQGIDMSQEDVRASRPSHTSKGRIRSSGSKRKRESQQKGEIEVIHMAIECTNDQLRTIAEWPARALANDTHVRQELLRLLHVMPELTS
        M DGNE+FP +YSQGID+SQ+DVRASRPS TS+GR  SSGSKRKR SQ+  E+E IH+A++ TNDQLR IAEWPAR LAND HVR E  R+L  MPELTS
Subjt:  MLDGNEEFPSMYSQGIDMSQEDVRASRPSHTSKGRIRSSGSKRKRESQQKGEIEVIHMAIECTNDQLRTIAEWPARALANDTHVRQELLRLLHVMPELTS

Query:  LDRVLCQRHLLSRMDDMRGFIQMIDDERQNFCRVLLGDISR
        LDR L QRHLLSRMDD+RGF+ M  DER+ FCRVLL DI R
Subjt:  LDRVLCQRHLLSRMDDMRGFIQMIDDERQNFCRVLLGDISR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGATGGGAACGAGGAGTTTCCATCCATGTATAGCCAGGGGATTGACATGTCCCAGGAGGATGTACGCGCATCACGACCTTCTCACACGTCAAAGGGTAGGATCAG
ATCGAGCGGATCGAAGAGGAAAAGGGAAAGCCAGCAGAAGGGCGAGATTGAAGTCATACATATGGCCATCGAGTGTACCAACGACCAACTCAGGACGATTGCCGAGTGGC
CTGCACGCGCCCTTGCCAATGACACCCATGTGCGCCAGGAATTATTACGCCTATTGCATGTGATGCCGGAACTAACCAGTTTGGATAGGGTGTTGTGCCAAAGGCACCTG
TTGTCTCGTATGGACGACATGCGAGGTTTCATACAGATGATTGATGATGAGAGGCAGAACTTTTGCAGAGTCCTCCTAGGAGACATCTCTAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGGATGGGAACGAGGAGTTTCCATCCATGTATAGCCAGGGGATTGACATGTCCCAGGAGGATGTACGCGCATCACGACCTTCTCACACGTCAAAGGGTAGGATCAG
ATCGAGCGGATCGAAGAGGAAAAGGGAAAGCCAGCAGAAGGGCGAGATTGAAGTCATACATATGGCCATCGAGTGTACCAACGACCAACTCAGGACGATTGCCGAGTGGC
CTGCACGCGCCCTTGCCAATGACACCCATGTGCGCCAGGAATTATTACGCCTATTGCATGTGATGCCGGAACTAACCAGTTTGGATAGGGTGTTGTGCCAAAGGCACCTG
TTGTCTCGTATGGACGACATGCGAGGTTTCATACAGATGATTGATGATGAGAGGCAGAACTTTTGCAGAGTCCTCCTAGGAGACATCTCTAGATAG
Protein sequenceShow/hide protein sequence
MLDGNEEFPSMYSQGIDMSQEDVRASRPSHTSKGRIRSSGSKRKRESQQKGEIEVIHMAIECTNDQLRTIAEWPARALANDTHVRQELLRLLHVMPELTSLDRVLCQRHL
LSRMDDMRGFIQMIDDERQNFCRVLLGDISR