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IVF0009081 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009081
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr06:11896045..11896526
RNA-Seq ExpressionIVF0009081
SyntenyIVF0009081
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038053.1 uncharacterized protein E6C27_scaffold36G002560 [Cucumis melo var. makuwa]7.97e-3069.23Show/hide
Query:  KFLIDVENYNAIESLERDYCEEETYYELFSIEEFLEEEDPNYILEKVNVVSDKKKFESLDLQAKGEKKTKPSIEEPPELKLKPLPNHLKRE
        +F  D E Y+AIESL  DYCEEE Y+ELF+ EEF EEED +YIL++VN+VS ++ FESLDLQ KG+KKTKPSIEEPP+L+LK LPNHLK E
Subjt:  KFLIDVENYNAIESLERDYCEEETYYELFSIEEFLEEEDPNYILEKVNVVSDKKKFESLDLQAKGEKKTKPSIEEPPELKLKPLPNHLKRE

KAA0040570.1 uncharacterized protein E6C27_scaffold262G001400 [Cucumis melo var. makuwa]4.99e-2967.68Show/hide
Query:  FLIDVENYNAIESLERDYCEEETYYELFSIEEFLEEEDPNYILEKVNVVSDKKKFESLDLQAKGEKKTKPSIEEPPELKLKPLPNHLKREGVIEYVKMP
        F IDVE+ NAIE L  DYCEEE YYELFS +EFLEE+ P YIL++VN VS K KFESLDLQ KGE KT+ SIEEPP+L+LKPLPNHLK   + E   +P
Subjt:  FLIDVENYNAIESLERDYCEEETYYELFSIEEFLEEEDPNYILEKVNVVSDKKKFESLDLQAKGEKKTKPSIEEPPELKLKPLPNHLKREGVIEYVKMP

KAA0048593.1 uncharacterized protein E6C27_scaffold61G002390 [Cucumis melo var. makuwa]5.46e-7695.31Show/hide
Query:  YNAIESLERDYCEEETYYELFSIEEFLEEEDPNYILEKVNVVSDKKKFESLDLQAKGEKKTKPSIEEPPELKLKPLPNHLKREGVIEYVKMPQEGDRMDL
        +N  ES ERDYCEEETYYELFSIEEFLEEEDPNYILEKVNVVSDKKKFESLDLQAKGEKKTKPSIEEPPELKLKPLPN+LKREGVIEYVKMPQEGDRMDL
Subjt:  YNAIESLERDYCEEETYYELFSIEEFLEEEDPNYILEKVNVVSDKKKFESLDLQAKGEKKTKPSIEEPPELKLKPLPNHLKREGVIEYVKMPQEGDRMDL

Query:  VDIQGISSSYWMHKIWLEEGQEGGDERG
        VDIQGISSSYWMHKI LEEGQEGGDERG
Subjt:  VDIQGISSSYWMHKIWLEEGQEGGDERG

KAA0052866.1 uncharacterized protein E6C27_scaffold33G00230 [Cucumis melo var. makuwa]6.20e-3857.62Show/hide
Query:  FLIDVENYNAIESLERDYCEEETYYELFSIEEFLEEEDPNYILEKVNVVSDKKKFESLDLQAKGEKKTKPSIEEPPELKLKPLPNHLK----REG-----
        F  D EN N IE L  +Y E+E Y ELFS EEF EE+DP+YIL++VNVVS +KKFESLDLQ KGEKKTKPSIEEPPEL+LK LPNHLK    RE      
Subjt:  FLIDVENYNAIESLERDYCEEETYYELFSIEEFLEEEDPNYILEKVNVVSDKKKFESLDLQAKGEKKTKPSIEEPPELKLKPLPNHLK----REG-----

Query:  -------------VIEYVKMPQEGDRMDLVDIQGISSSYWMHKIWLEEGQE
                     ++  +K  ++     LVDIQGISSSY MHK+ LEEGQE
Subjt:  -------------VIEYVKMPQEGDRMDLVDIQGISSSYWMHKIWLEEGQE

KAA0054122.1 uncharacterized protein E6C27_scaffold131G00340 [Cucumis melo var. makuwa]2.46e-3071.11Show/hide
Query:  MKFLIDVENYNAIESLERDYCEEETYYELFSIEEFLEEEDPNYILEKVNVVSDKKKFESLDLQAKGEKKTKPSIEEPPELKLKPLPNHLK
        MKF  +   YNAIESL  DYC+EE Y+ELFS EEF EEEDP+YILE+VNV+  K KFESLDL+ KG+KK K SIEEPPE++LKPLPNHLK
Subjt:  MKFLIDVENYNAIESLERDYCEEETYYELFSIEEFLEEEDPNYILEKVNVVSDKKKFESLDLQAKGEKKTKPSIEEPPELKLKPLPNHLK

TrEMBL top hitse value%identityAlignment
A0A5A7T4Y2 Uncharacterized protein2.4e-2469.23Show/hide
Query:  KFLIDVENYNAIESLERDYCEEETYYELFSIEEFLEEEDPNYILEKVNVVSDKKKFESLDLQAKGEKKTKPSIEEPPELKLKPLPNHLKRE
        +F  D E Y+AIESL  DYCEEE Y+ELF+ EEF EEED +YIL++VN+VS ++ FESLDLQ KG+KKTKPSIEEPP+L+LK LPNHLK E
Subjt:  KFLIDVENYNAIESLERDYCEEETYYELFSIEEFLEEEDPNYILEKVNVVSDKKKFESLDLQAKGEKKTKPSIEEPPELKLKPLPNHLKRE

A0A5A7UE99 Uncharacterized protein1.8e-2471.11Show/hide
Query:  MKFLIDVENYNAIESLERDYCEEETYYELFSIEEFLEEEDPNYILEKVNVVSDKKKFESLDLQAKGEKKTKPSIEEPPELKLKPLPNHLK
        MKF  +   YNAIESL  DYC+EE Y+ELFS EEF EEEDP+YILE+VNV+  K KFESLDL+ KG+KK K SIEEPPE++LKPLPNHLK
Subjt:  MKFLIDVENYNAIESLERDYCEEETYYELFSIEEFLEEEDPNYILEKVNVVSDKKKFESLDLQAKGEKKTKPSIEEPPELKLKPLPNHLK

A0A5A7UF79 Uncharacterized protein3.4e-3156.29Show/hide
Query:  FLIDVENYNAIESLERDYCEEETYYELFSIEEFLEEEDPNYILEKVNVVSDKKKFESLDLQAKGEKKTKPSIEEPPELKLKPLPNHL-------------
        F  D EN N IE L  +Y E+E Y ELFS EEF EE+DP+YIL++VNVVS +KKFESLDLQ KGEKKTKPSIEEPPEL+LK LPNHL             
Subjt:  FLIDVENYNAIESLERDYCEEETYYELFSIEEFLEEEDPNYILEKVNVVSDKKKFESLDLQAKGEKKTKPSIEEPPELKLKPLPNHL-------------

Query:  ---------KREGVIEYVKMPQEGDRMDLVDIQGISSSYWMHKIWLEEGQE
                 K + ++  +K  ++     LVDIQGISSSY MHK+ LEEGQE
Subjt:  ---------KREGVIEYVKMPQEGDRMDLVDIQGISSSYWMHKIWLEEGQE

A0A5D3C0Z2 Integrase_H2C2 domain-containing protein8.2e-2573.86Show/hide
Query:  FLIDVENYNAIESLERDYCEEETYYELFSIEEFLEEEDPNYILEKVNVVSDKKKFESLDLQAKGEKKTKPSIEEPPELKLKPLPNHLK
        F IDVE+ NAIE L  DYCEEE YYELFS +EFLEE+ P YIL++VN VS K KFESLDLQ KGE KT+ SIEEPP+L+LKPLPNHLK
Subjt:  FLIDVENYNAIESLERDYCEEETYYELFSIEEFLEEEDPNYILEKVNVVSDKKKFESLDLQAKGEKKTKPSIEEPPELKLKPLPNHLK

A0A5D3DV59 Uncharacterized protein9.3e-6195.31Show/hide
Query:  YNAIESLERDYCEEETYYELFSIEEFLEEEDPNYILEKVNVVSDKKKFESLDLQAKGEKKTKPSIEEPPELKLKPLPNHLKREGVIEYVKMPQEGDRMDL
        +N  ES ERDYCEEETYYELFSIEEFLEEEDPNYILEKVNVVSDKKKFESLDLQAKGEKKTKPSIEEPPELKLKPLPN+LKREGVIEYVKMPQEGDRMDL
Subjt:  YNAIESLERDYCEEETYYELFSIEEFLEEEDPNYILEKVNVVSDKKKFESLDLQAKGEKKTKPSIEEPPELKLKPLPNHLKREGVIEYVKMPQEGDRMDL

Query:  VDIQGISSSYWMHKIWLEEGQEGGDERG
        VDIQGISSSYWMHKI LEEGQEGGDERG
Subjt:  VDIQGISSSYWMHKIWLEEGQEGGDERG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTCCTCATTGATGTTGAAAATTACAATGCGATAGAGTCCCTTGAAAGGGACTATTGCGAGGAAGAAACCTACTATGAGCTATTTAGCATTGAAGAATTCCTCGA
AGAAGAGGACCCAAATTATATATTGGAAAAAGTAAATGTCGTGTCTGACAAAAAGAAGTTCGAGTCTTTGGATTTACAAGCCAAAGGCGAAAAGAAGACAAAGCCATCAA
TCGAAGAACCACCAGAATTAAAGCTCAAGCCTTTACCCAACCACCTGAAAAGAGAAGGCGTTATTGAATATGTTAAAATGCCACAAGAAGGTGATAGGATGGACCTAGTG
GACATCCAAGGCATAAGCTCATCCTATTGGATGCATAAGATTTGGTTGGAAGAGGGTCAAGAGGGCGGAGATGAAAGAGGTCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATTCCTCATTGATGTTGAAAATTACAATGCGATAGAGTCCCTTGAAAGGGACTATTGCGAGGAAGAAACCTACTATGAGCTATTTAGCATTGAAGAATTCCTCGA
AGAAGAGGACCCAAATTATATATTGGAAAAAGTAAATGTCGTGTCTGACAAAAAGAAGTTCGAGTCTTTGGATTTACAAGCCAAAGGCGAAAAGAAGACAAAGCCATCAA
TCGAAGAACCACCAGAATTAAAGCTCAAGCCTTTACCCAACCACCTGAAAAGAGAAGGCGTTATTGAATATGTTAAAATGCCACAAGAAGGTGATAGGATGGACCTAGTG
GACATCCAAGGCATAAGCTCATCCTATTGGATGCATAAGATTTGGTTGGAAGAGGGTCAAGAGGGCGGAGATGAAAGAGGTCGTTAA
Protein sequenceShow/hide protein sequence
MKFLIDVENYNAIESLERDYCEEETYYELFSIEEFLEEEDPNYILEKVNVVSDKKKFESLDLQAKGEKKTKPSIEEPPELKLKPLPNHLKREGVIEYVKMPQEGDRMDLV
DIQGISSSYWMHKIWLEEGQEGGDERGR