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IVF0009090 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009090
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionWD repeat-containing protein RUP2-like
Genome locationchr07:15431016..15431342
RNA-Seq ExpressionIVF0009090
SyntenyIVF0009090
Gene Ontology termsGO:0010224 - response to UV-B (biological process)
GO:0005515 - protein binding (molecular function)
GO:0016874 - ligase activity (molecular function)
InterPro domainsIPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily
IPR044616 - WD repeat-containing protein RUP1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035439.1 WD repeat-containing protein RUP2-like [Cucumis melo var. makuwa]4.37e-7397.2Show/hide
Query:  MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVF
        MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQ CTLVAGGSDG+LQVF
Subjt:  MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVF

Query:  VGHKKRF
        VGHKK F
Subjt:  VGHKKRF

KAA0038490.1 WD repeat-containing protein RUP2-like [Cucumis melo var. makuwa]7.50e-7399.07Show/hide
Query:  MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVF
        MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVF
Subjt:  MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVF

Query:  VGHKKRFF
        VGHKKR F
Subjt:  VGHKKRFF

KAA0056674.1 WD repeat-containing protein RUP2-like [Cucumis melo var. makuwa]5.60e-6198.88Show/hide
Query:  MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLV
        MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTL+
Subjt:  MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLV

TYK31084.1 WD repeat-containing protein RUP2-like [Cucumis melo var. makuwa]9.66e-78100Show/hide
Query:  MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVF
        MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVF
Subjt:  MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVF

Query:  VGHKKRFF
        VGHKKRFF
Subjt:  VGHKKRFF

XP_004148378.3 LOW QUALITY PROTEIN: WD repeat-containing protein RUP2 [Cucumis sativus]5.84e-6991.38Show/hide
Query:  MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGG--------MGSGYGLVSSVCWRQVGEQECTLVAGG
        MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWR GGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGG        MGSGYGLVSSVCWRQVGEQECTLVAGG
Subjt:  MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGG--------MGSGYGLVSSVCWRQVGEQECTLVAGG

Query:  SDGVLQVFVGHKKRFF
        SDGVLQVFVGHKKR F
Subjt:  SDGVLQVFVGHKKRFF

TrEMBL top hitse value%identityAlignment
A0A0A0LHK2 Ubiquitin ligase protein cop11.2e-5591.38Show/hide
Query:  MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDG--------GMGSGYGLVSSVCWRQVGEQECTLVAGG
        MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWR+GGLIGCGSEDKRVFVYDKRWGEPIWVKEFDG        GMGSGYGLVSSVCWRQVGEQECTLVAGG
Subjt:  MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDG--------GMGSGYGLVSSVCWRQVGEQECTLVAGG

Query:  SDGVLQVFVGHKKRFF
        SDGVLQVFVGHKKR F
Subjt:  SDGVLQVFVGHKKRFF

A0A5A7T240 WD repeat-containing protein RUP2-like6.4e-5797.2Show/hide
Query:  MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVF
        MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQ CTLVAGGSDG+LQVF
Subjt:  MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVF

Query:  VGHKKRF
        VGHKK F
Subjt:  VGHKKRF

A0A5A7T553 WD repeat-containing protein RUP2-like2.6e-5899.07Show/hide
Query:  MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVF
        MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVF
Subjt:  MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVF

Query:  VGHKKRFF
        VGHKKR F
Subjt:  VGHKKRFF

A0A5D3E556 WD repeat-containing protein RUP2-like3.1e-59100Show/hide
Query:  MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVF
        MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVF
Subjt:  MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVF

Query:  VGHKKRFF
        VGHKKRFF
Subjt:  VGHKKRFF

A0A6J1GKZ5 WD repeat-containing protein RUP2-like1.4e-4885.71Show/hide
Query:  MWKTEE----GGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGV
        MWK EE    GGGARVVRTYEGHVNGRSFVGLSVWR GGLIGCGSEDKRVFVYDKRWGE +WV+EFD  +GSGYGLVSSVCWRQVGE ECTLVAGGSDGV
Subjt:  MWKTEE----GGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGV

Query:  LQVFVGHKKRFF
        L+VFVG KKR F
Subjt:  LQVFVGHKKRFF

SwissProt top hitse value%identityAlignment
P43254 E3 ubiquitin-protein ligase COP16.9e-0833.68Show/hide
Query:  VRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEF------DGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVFV
        VRT+ GH N ++FVGL+V      + CGSE   V+VY K    P+    F      D    +G   +S+VCW+       T++   S G ++V V
Subjt:  VRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEF------DGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVFV

P93471 E3 ubiquitin-protein ligase COP11.1e-0835.79Show/hide
Query:  VRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEF------DGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVFV
        VRT+ GH N ++FVGL+V  +   I CGSE   VFVY K   +P+    F      D    +G   +S+VCW+       T++   S G ++V V
Subjt:  VRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEF------DGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVFV

Q9FFA7 WD repeat-containing protein RUP29.2e-3766.67Show/hide
Query:  MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDG-GMGSGYG--LVSSVCWRQVGEQECTLVAGGSDGVL
        +W  E+G   RV+RTYEGHVN R+FVGLSVWR G L GCGSE+ RVFVYD+RWG+P+WV  F+  GM SG     VSSVCWRQ G  +CTLVAGGSDGVL
Subjt:  MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDG-GMGSGYG--LVSSVCWRQVGEQECTLVAGGSDGVL

Query:  QVFVGHKK
        QV+VG +K
Subjt:  QVFVGHKK

Q9LJR3 Protein SPA1-RELATED 34.5e-0735.11Show/hide
Query:  VRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDG-------GMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQV
        + ++ GH N ++FVGLSV    G I  GSE   VFVY K +  P+    F+         +      +SS+CWR    Q  TLVA  S+G +++
Subjt:  VRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDG-------GMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQV

Q9LTJ6 WD repeat-containing protein RUP11.6e-2864.58Show/hide
Query:  GARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWV--KEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVFVG
        G RVVRTY GHVN R+FVGLSVWR GGL+  GSE+ +VFVYDKRW EP+WV         GS    VSSVC RQV E  CTLVAGGSDG L++F G
Subjt:  GARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWV--KEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVFVG

Arabidopsis top hitse value%identityAlignment
AT1G53090.1 SPA1-related 45.4e-0836.17Show/hide
Query:  VRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEF-------DGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQV
        + ++ GH N ++FVGLSV    G I  GSE   VFVY K +  P+   +F       +  +      +SSVCWR    Q  TLVA  S G +++
Subjt:  VRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEF-------DGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQV

AT2G32950.1 Transducin/WD40 repeat-like superfamily protein4.9e-0933.68Show/hide
Query:  VRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEF------DGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVFV
        VRT+ GH N ++FVGL+V      + CGSE   V+VY K    P+    F      D    +G   +S+VCW+       T++   S G ++V V
Subjt:  VRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEF------DGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVFV

AT3G15354.1 SPA1-related 33.2e-0835.11Show/hide
Query:  VRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDG-------GMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQV
        + ++ GH N ++FVGLSV    G I  GSE   VFVY K +  P+    F+         +      +SS+CWR    Q  TLVA  S+G +++
Subjt:  VRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDG-------GMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQV

AT5G23730.1 Transducin/WD40 repeat-like superfamily protein6.5e-3866.67Show/hide
Query:  MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDG-GMGSGYG--LVSSVCWRQVGEQECTLVAGGSDGVL
        +W  E+G   RV+RTYEGHVN R+FVGLSVWR G L GCGSE+ RVFVYD+RWG+P+WV  F+  GM SG     VSSVCWRQ G  +CTLVAGGSDGVL
Subjt:  MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDG-GMGSGYG--LVSSVCWRQVGEQECTLVAGGSDGVL

Query:  QVFVGHKK
        QV+VG +K
Subjt:  QVFVGHKK

AT5G52250.1 Transducin/WD40 repeat-like superfamily protein1.1e-2964.58Show/hide
Query:  GARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWV--KEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVFVG
        G RVVRTY GHVN R+FVGLSVWR GGL+  GSE+ +VFVYDKRW EP+WV         GS    VSSVC RQV E  CTLVAGGSDG L++F G
Subjt:  GARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWV--KEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVFVG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGAAGACGGAGGAGGGCGGGGGTGCACGTGTGGTGCGCACGTACGAGGGGCACGTGAACGGGAGGAGCTTTGTGGGGTTGTCAGTGTGGAGGAAGGGGGGCTTAAT
CGGGTGTGGATCGGAGGACAAGAGAGTGTTTGTGTACGATAAGAGGTGGGGAGAGCCAATATGGGTAAAGGAATTTGATGGGGGGATGGGGTCGGGTTATGGGTTGGTCA
GTAGTGTGTGTTGGAGGCAAGTGGGAGAGCAAGAATGCACCTTGGTAGCTGGCGGGTCGGATGGCGTTTTGCAAGTTTTTGTCGGACACAAGAAGAGGTTTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGAAGACGGAGGAGGGCGGGGGTGCACGTGTGGTGCGCACGTACGAGGGGCACGTGAACGGGAGGAGCTTTGTGGGGTTGTCAGTGTGGAGGAAGGGGGGCTTAAT
CGGGTGTGGATCGGAGGACAAGAGAGTGTTTGTGTACGATAAGAGGTGGGGAGAGCCAATATGGGTAAAGGAATTTGATGGGGGGATGGGGTCGGGTTATGGGTTGGTCA
GTAGTGTGTGTTGGAGGCAAGTGGGAGAGCAAGAATGCACCTTGGTAGCTGGCGGGTCGGATGGCGTTTTGCAAGTTTTTGTCGGACACAAGAAGAGGTTTTTTTGA
Protein sequenceShow/hide protein sequence
MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVFVGHKKRFF