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IVF0009104 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009104
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionarabinogalactan peptide 13-like
Genome locationchr02:2946002..2946481
RNA-Seq ExpressionIVF0009104
SyntenyIVF0009104
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
InterPro domainsIPR039281 - Arabinogalactan protein 3/12/13/14/21


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653471.1 hypothetical protein Csa_007150 [Cucumis sativus]1.06e-1685.45Show/hide
Query:  AANKF--LMITMMVVVVMVISSSSAIVAAQEAPAPSPASDASLSIPTLMASFVPL
        AA +F  LM+TMMVVV++ ISSSSAIVAAQEAPAPSPASDASLSIPTLMASFVPL
Subjt:  AANKF--LMITMMVVVVMVISSSSAIVAAQEAPAPSPASDASLSIPTLMASFVPL
KAG7022018.1 Arabinogalactan peptide 14, partial [Cucurbita argyrosperma subsp. argyrosperma]1.05e-0865Show/hide
Query:  AANKF--LMITMMVVVVMVISSSSAIVAAQEAPAPSPASDASLSIPTLMASFVPLLFGLF
        AA KF  LM+ M   VV V++ SS+IVAAQEAPAPSPASDA LS+PTLMAS  PL+   F
Subjt:  AANKF--LMITMMVVVVMVISSSSAIVAAQEAPAPSPASDASLSIPTLMASFVPLLFGLF
KAG7023913.1 Arabinogalactan peptide 14, partial [Cucurbita argyrosperma subsp. argyrosperma]3.65e-0969.39Show/hide
Query:  MMVVVVMVISSSSAIVAAQEAPAPSPASDASLSIPTLMASFVPLLFGLF
        M+ +VV  ++ SS IVAAQEAPAPSPASDASLS+PTLMAS  PL  G F
Subjt:  MMVVVVMVISSSSAIVAAQEAPAPSPASDASLSIPTLMASFVPLLFGLF
XP_011660059.1 arabinogalactan protein 13 [Cucumis sativus]2.21e-2083.87Show/hide
Query:  AANKF--LMITMMVVVVMVISSSSAIVAAQEAPAPSPASDASLSIPTLMASFVPLLFGLFFI
        AA +F  LM+TMMVVV++ ISSSSAIVAAQEAPAPSPASDASLSIPTLMASFVPL+FG FFI
Subjt:  AANKF--LMITMMVVVVMVISSSSAIVAAQEAPAPSPASDASLSIPTLMASFVPLLFGLFFI
XP_038879727.1 arabinogalactan protein 13-like [Benincasa hispida]1.98e-1161.67Show/hide
Query:  MEAANKFLMITMMVVVVMVISSSSAIVAAQEAPAPSPASDASLSIPTLMASFVPLLFGLF
        MEA     ++ M++VVV++  SSS+IVAAQEAPAPSPASDA +S+PTLMAS  PL+ G F
Subjt:  MEAANKFLMITMMVVVVMVISSSSAIVAAQEAPAPSPASDASLSIPTLMASFVPLLFGLF
TrEMBL top hitse value%identityAlignment
A0A0A0LWU9 Uncharacterized protein1.5e-1383.08Show/hide
Query:  MEAANK---FLMITMMVVVVMVISSSSAIVAAQEAPAPSPASDASLSIPTLMASFVPLLFGLFFI
        MEAA K    LM+TMMVVV++ ISSSSAIVAAQEAPAPSPASDASLSIPTLMASFVPL+FG FFI
Subjt:  MEAANK---FLMITMMVVVVMVISSSSAIVAAQEAPAPSPASDASLSIPTLMASFVPLLFGLFFI
A0A6J1JCI6 arabinogalactan peptide 13-like1.2e-0467.35Show/hide
Query:  MMVVVVMVISSSSAIVAAQEAPAPSPASDASLSIPTLMASFVPLLFGLF
        M+ +VV  ++ SS IVAAQEAPAPSPASDA LS+PTLMAS  PL  G F
Subjt:  MMVVVVMVISSSSAIVAAQEAPAPSPASDASLSIPTLMASFVPLLFGLF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G56540.1 arabinogalactan protein 147.9e-0446.55Show/hide
Query:  ANKFLMITMMVVVVMVISSSSAIVAAQEAPAPSPASDASLSIPTLMASFVPLLFGLFF
        A K  +  +++V V+  S+    VAA +APAPSP SDAS  IPT  AS   + FG FF
Subjt:  ANKFLMITMMVVVVMVISSSSAIVAAQEAPAPSPASDASLSIPTLMASFVPLLFGLFF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCAGCAAACAAGTTTCTAATGATAACAATGATGGTGGTTGTTGTAATGGTCATTTCATCATCATCCGCCATTGTTGCAGCTCAAGAAGCTCCAGCTCCAAGCCC
AGCTTCTGATGCCTCTCTTTCTATTCCAACGTTAATGGCTTCTTTTGTTCCTCTTCTTTTTGGATTGTTTTTCATCTAA
mRNA sequenceShow/hide mRNA sequence
ACCATTTTCAAAAAAAAGAAAAGAAAAGAAAAACAAAGAGAAACCCATTTGAAAAAAAAAAAAAAAGTCCTCAACTTTCAAGGATTTTTTCATCAAAATGGAAGCAGCAA
ACAAGTTTCTAATGATAACAATGATGGTGGTTGTTGTAATGGTCATTTCATCATCATCCGCCATTGTTGCAGCTCAAGAAGCTCCAGCTCCAAGCCCAGCTTCTGATGCC
TCTCTTTCTATTCCAACGTTAATGGCTTCTTTTGTTCCTCTTCTTTTTGGATTGTTTTTCATCTAATAATTTTCTTCCCCTTTCCTCTTTTTTCTTTTCTTTCAATTTAC
CTATGAATATATATATATATATAATGTGTGTGTGTGTGTTTTTCTTTATTTAGGGGATGATGATTGAATTTGTTTGGGTGTGAGATTTGGGATTATTATTGATTTTATGT
ATATCTTTCCATATTAATTTAATGTTATGTTGTTATTCTA
Protein sequenceShow/hide protein sequence
MEAANKFLMITMMVVVVMVISSSSAIVAAQEAPAPSPASDASLSIPTLMASFVPLLFGLFFI