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IVF0009118 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009118
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCACTA en-spm transposon protein
Genome locationchr01:19626364..19633721
RNA-Seq ExpressionIVF0009118
SyntenyIVF0009118
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032321.1 SEC12-like protein 2 [Cucumis melo var. makuwa]1.36e-3298.33Show/hide
Query:  ENDVSAAWFPSTSLKSKHQPSQYEDLPHQSTDADIFVTDNKIVPSHPASYYVATVGGGEE
        ENDVSAAWFPSTSLKSKHQPSQYEDLPHQSTDADIFVTDNKIVPSHPASYYVA VGGGEE
Subjt:  ENDVSAAWFPSTSLKSKHQPSQYEDLPHQSTDADIFVTDNKIVPSHPASYYVATVGGGEE

KAA0040823.1 SEC12-like protein 2 [Cucumis melo var. makuwa]2.15e-34100Show/hide
Query:  MENDVSAAWFPSTSLKSKHQPSQYEDLPHQSTDADIFVTDNKIVPSHPASYYVATVGGGEE
        MENDVSAAWFPSTSLKSKHQPSQYEDLPHQSTDADIFVTDNKIVPSHPASYYVATVGGGEE
Subjt:  MENDVSAAWFPSTSLKSKHQPSQYEDLPHQSTDADIFVTDNKIVPSHPASYYVATVGGGEE

KAA0040824.1 hypothetical protein E6C27_scaffold333G00440 [Cucumis melo var. makuwa]1.11e-103100Show/hide
Query:  GETSSSVRHNDYPPKATTQSDGEDIFEYTGDTVCKPMLDHFEQVLTNRQTCLRTLMSPRTLALSYAMSSLTPKRFVHNIDTISILLLFVILAGSKYRFTS
        GETSSSVRHNDYPPKATTQSDGEDIFEYTGDTVCKPMLDHFEQVLTNRQTCLRTLMSPRTLALSYAMSSLTPKRFVHNIDTISILLLFVILAGSKYRFTS
Subjt:  GETSSSVRHNDYPPKATTQSDGEDIFEYTGDTVCKPMLDHFEQVLTNRQTCLRTLMSPRTLALSYAMSSLTPKRFVHNIDTISILLLFVILAGSKYRFTS

Query:  EITSYSLRPTDLLLNNWFKVQLINLSPSLANEKVGPLVQHLDSVFKGTTYLLSKKW
        EITSYSLRPTDLLLNNWFKVQLINLSPSLANEKVGPLVQHLDSVFKGTTYLLSKKW
Subjt:  EITSYSLRPTDLLLNNWFKVQLINLSPSLANEKVGPLVQHLDSVFKGTTYLLSKKW

KAA0053271.1 SEC12-like protein 2 [Cucumis melo var. makuwa]1.36e-3298.33Show/hide
Query:  ENDVSAAWFPSTSLKSKHQPSQYEDLPHQSTDADIFVTDNKIVPSHPASYYVATVGGGEE
        ENDVSAAWFPSTSLKSKHQPSQYEDLPHQSTDADIFVTDNKIVPSHPASYYVA VGGGEE
Subjt:  ENDVSAAWFPSTSLKSKHQPSQYEDLPHQSTDADIFVTDNKIVPSHPASYYVATVGGGEE

KAA0062369.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.97e-4363.04Show/hide
Query:  LFVILAGSKYRFTSEITSYSLRPTDLLLNNWFKVQLINLSPSLANEKVGPLVQHLDSVFKGTTYLLSKKWKFIVSSGLRSSYTTRKWSVSDTKKDVGIKN
        LFVIL GSKYRFT EITSYSLRPTD LLNNW KVQ IN +PS ANEKVG  VQ LD   K TTYLLS+K                KWS+ D +KDV IKN
Subjt:  LFVILAGSKYRFTSEITSYSLRPTDLLLNNWFKVQLINLSPSLANEKVGPLVQHLDSVFKGTTYLLSKKWKFIVSSGLRSSYTTRKWSVSDTKKDVGIKN

Query:  VGNKGFPDAVNNAL----GKHSLSTHHEGIGKYTSGKG
        VGNK FP+A+N A     GKH   THHEG+GKY+SGKG
Subjt:  VGNKGFPDAVNNAL----GKHSLSTHHEGIGKYTSGKG

TrEMBL top hitse value%identityAlignment
A0A5A7SRZ9 SEC12-like protein 23.7e-2598.33Show/hide
Query:  ENDVSAAWFPSTSLKSKHQPSQYEDLPHQSTDADIFVTDNKIVPSHPASYYVATVGGGEE
        ENDVSAAWFPSTSLKSKHQPSQYEDLPHQSTDADIFVTDNKIVPSHPASYYVA VGGGEE
Subjt:  ENDVSAAWFPSTSLKSKHQPSQYEDLPHQSTDADIFVTDNKIVPSHPASYYVATVGGGEE

A0A5A7TBI3 Uncharacterized protein7.3e-82100Show/hide
Query:  GETSSSVRHNDYPPKATTQSDGEDIFEYTGDTVCKPMLDHFEQVLTNRQTCLRTLMSPRTLALSYAMSSLTPKRFVHNIDTISILLLFVILAGSKYRFTS
        GETSSSVRHNDYPPKATTQSDGEDIFEYTGDTVCKPMLDHFEQVLTNRQTCLRTLMSPRTLALSYAMSSLTPKRFVHNIDTISILLLFVILAGSKYRFTS
Subjt:  GETSSSVRHNDYPPKATTQSDGEDIFEYTGDTVCKPMLDHFEQVLTNRQTCLRTLMSPRTLALSYAMSSLTPKRFVHNIDTISILLLFVILAGSKYRFTS

Query:  EITSYSLRPTDLLLNNWFKVQLINLSPSLANEKVGPLVQHLDSVFKGTTYLLSKKW
        EITSYSLRPTDLLLNNWFKVQLINLSPSLANEKVGPLVQHLDSVFKGTTYLLSKKW
Subjt:  EITSYSLRPTDLLLNNWFKVQLINLSPSLANEKVGPLVQHLDSVFKGTTYLLSKKW

A0A5A7TCI6 SEC12-like protein 21.9e-26100Show/hide
Query:  MENDVSAAWFPSTSLKSKHQPSQYEDLPHQSTDADIFVTDNKIVPSHPASYYVATVGGGEE
        MENDVSAAWFPSTSLKSKHQPSQYEDLPHQSTDADIFVTDNKIVPSHPASYYVATVGGGEE
Subjt:  MENDVSAAWFPSTSLKSKHQPSQYEDLPHQSTDADIFVTDNKIVPSHPASYYVATVGGGEE

A0A5A7UI88 SEC12-like protein 23.7e-2598.33Show/hide
Query:  ENDVSAAWFPSTSLKSKHQPSQYEDLPHQSTDADIFVTDNKIVPSHPASYYVATVGGGEE
        ENDVSAAWFPSTSLKSKHQPSQYEDLPHQSTDADIFVTDNKIVPSHPASYYVA VGGGEE
Subjt:  ENDVSAAWFPSTSLKSKHQPSQYEDLPHQSTDADIFVTDNKIVPSHPASYYVATVGGGEE

A0A5A7V9I9 CACTA en-spm transposon protein1.3e-3563.04Show/hide
Query:  LFVILAGSKYRFTSEITSYSLRPTDLLLNNWFKVQLINLSPSLANEKVGPLVQHLDSVFKGTTYLLSKKWKFIVSSGLRSSYTTRKWSVSDTKKDVGIKN
        LFVIL GSKYRFT EITSYSLRPTD LLNNW KVQ IN +PS ANEKVG  VQ LD   K TTYLLS+K                KWS+ D +KDV IKN
Subjt:  LFVILAGSKYRFTSEITSYSLRPTDLLLNNWFKVQLINLSPSLANEKVGPLVQHLDSVFKGTTYLLSKKWKFIVSSGLRSSYTTRKWSVSDTKKDVGIKN

Query:  VGNKGFPDAVN----NALGKHSLSTHHEGIGKYTSGKG
        VGNK FP+A+N     A GKH   THHEG+GKY+SGKG
Subjt:  VGNKGFPDAVN----NALGKHSLSTHHEGIGKYTSGKG

SwissProt top hitse value%identityAlignment
F4IV99 Protein CHROMATIN REMODELING 59.0e-0584.62Show/hide
Query:  EVSLRKLDEQPEWLKGGKLRDYQLEG
        + SLRKLDEQPEWL GG LRDYQLEG
Subjt:  EVSLRKLDEQPEWLKGGKLRDYQLEG

Arabidopsis top hitse value%identityAlignment
AT2G13370.1 chromatin remodeling 56.4e-0684.62Show/hide
Query:  EVSLRKLDEQPEWLKGGKLRDYQLEG
        + SLRKLDEQPEWL GG LRDYQLEG
Subjt:  EVSLRKLDEQPEWLKGGKLRDYQLEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATGATGTCTCTGCCGCTTGGTTCCCTTCAACTTCTCTCAAATCCAAACATCAACCTTCACAATATGAAGATCTTCCACATCAATCCACTGATGCTGAC
ATTTTCGTCACCGACAACAAAATAGTTCCATCTCATCCCGCTAGTTACTACGTAGCGACTGTTGGCGGTGGTGAAGAAGTGAGTTTAAGGAAACTTGATGAACAG
CCTGAGTGGTTGAAGGGAGGCAAGCTTCGAGACTATCAGCTTGAAGGCGAGACAAGCTCCTCTGTGCGGCATAATGACTATCCACCCAAAGCCACAACGCAGAGC
GATGGAGAAGACATCTTTGAGTACACTGGGGACACTGTTTGCAAGCCCATGCTCGACCATTTTGAGCAAGTGCTTACTAATAGACAGACATGCTTGCGCACATTG
ATGTCGCCCAGAACACTAGCACTCAGTTACGCAATGAGTTCGCTGACACCCAAACGTTTCGTGCACAACATAGATACTATTTCCATCCTTTTGTTATTCGTAATC
TTGGCTGGGTCAAAATACCGTTTTACCTCCGAGATTACATCTTACTCCTTAAGACCCACTGATCTACTATTGAACAATTGGTTTAAGGTCCAACTTATAAACTTG
AGTCCTTCTCTGGCCAATGAGAAGGTGGGGCCCCTTGTTCAACACTTGGATTCAGTCTTTAAAGGAACAACCTATCTACTATCCAAGAAGTGGAAGTTCATAGTT
AGCTCTGGATTAAGATCAAGTTACACTACAAGAAAATGGAGCGTTTCCGACACAAAAAAGGACGTCGGCATAAAGAACGTCGGGAATAAAGGCTTTCCCGATGCC
GTCAACAATGCGTTGGGAAAACACTCTTTATCGACGCATCACGAAGGCATCGGCAAGTATACGTCGGGAAAAGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATGATGTCTCTGCCGCTTGGTTCCCTTCAACTTCTCTCAAATCCAAACATCAACCTTCACAATATGAAGATCTTCCACATCAATCCACTGATGCTGAC
ATTTTCGTCACCGACAACAAAATAGTTCCATCTCATCCCGCTAGTTACTACGTAGCGACTGTTGGCGGTGGTGAAGAAGTGAGTTTAAGGAAACTTGATGAACAG
CCTGAGTGGTTGAAGGGAGGCAAGCTTCGAGACTATCAGCTTGAAGGCGAGACAAGCTCCTCTGTGCGGCATAATGACTATCCACCCAAAGCCACAACGCAGAGC
GATGGAGAAGACATCTTTGAGTACACTGGGGACACTGTTTGCAAGCCCATGCTCGACCATTTTGAGCAAGTGCTTACTAATAGACAGACATGCTTGCGCACATTG
ATGTCGCCCAGAACACTAGCACTCAGTTACGCAATGAGTTCGCTGACACCCAAACGTTTCGTGCACAACATAGATACTATTTCCATCCTTTTGTTATTCGTAATC
TTGGCTGGGTCAAAATACCGTTTTACCTCCGAGATTACATCTTACTCCTTAAGACCCACTGATCTACTATTGAACAATTGGTTTAAGGTCCAACTTATAAACTTG
AGTCCTTCTCTGGCCAATGAGAAGGTGGGGCCCCTTGTTCAACACTTGGATTCAGTCTTTAAAGGAACAACCTATCTACTATCCAAGAAGTGGAAGTTCATAGTT
AGCTCTGGATTAAGATCAAGTTACACTACAAGAAAATGGAGCGTTTCCGACACAAAAAAGGACGTCGGCATAAAGAACGTCGGGAATAAAGGCTTTCCCGATGCC
GTCAACAATGCGTTGGGAAAACACTCTTTATCGACGCATCACGAAGGCATCGGCAAGTATACGTCGGGAAAAGGGTAA
Protein sequenceShow/hide protein sequence
MENDVSAAWFPSTSLKSKHQPSQYEDLPHQSTDADIFVTDNKIVPSHPASYYVATVGGGEEVSLRKLDEQPEWLKGGKLRDYQLEGETSSSVRHNDYPPKATTQS
DGEDIFEYTGDTVCKPMLDHFEQVLTNRQTCLRTLMSPRTLALSYAMSSLTPKRFVHNIDTISILLLFVILAGSKYRFTSEITSYSLRPTDLLLNNWFKVQLINL
SPSLANEKVGPLVQHLDSVFKGTTYLLSKKWKFIVSSGLRSSYTTRKWSVSDTKKDVGIKNVGNKGFPDAVNNALGKHSLSTHHEGIGKYTSGKG