; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0009144 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009144
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr01:17907804..17907995
RNA-Seq ExpressionIVF0009144
SyntenyIVF0009144
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035002.1 polyprotein [Cucumis melo var. makuwa]8.21e-1452.38Show/hide
Query:  MELIKDYDCTIAYYPGKTNVVADALSKKIYSSRSGGKMARLQELRGFKVVLNAGTFGNLMTCF
        MELIKD+DCTI Y+  K NVVAD LS+K +   SGG++A LQELR +K  +++G+ G+ +  F
Subjt:  MELIKDYDCTIAYYPGKTNVVADALSKKIYSSRSGGKMARLQELRGFKVVLNAGTFGNLMTCF

KAA0054749.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]4.74e-1357.14Show/hide
Query:  MELIKDYDCTIAYYPGKTNVVADALSKKIYSSRSGGKMARLQELRGFKVVLNAGTFGNLMTCF
        MELIKDY+ TIAY+PGK NVVA+ALS+K  S+   G++A ++ELR  K +LN G  GNL+  F
Subjt:  MELIKDYDCTIAYYPGKTNVVADALSKKIYSSRSGGKMARLQELRGFKVVLNAGTFGNLMTCF

KAA0058456.1 CCHC-type integrase [Cucumis melo var. makuwa]2.98e-1963.49Show/hide
Query:  MELIKDYDCTIAYYPGKTNVVADALSKKIYSSRSGGKMARLQELRGFKVVLNAGTFGNLMTCF
        M+LIKDYDCTI Y+ GK N++ADALS KI S R+ G+MA L+EL+GFK +L A T GNLM  F
Subjt:  MELIKDYDCTIAYYPGKTNVVADALSKKIYSSRSGGKMARLQELRGFKVVLNAGTFGNLMTCF

KAA0059914.1 CCHC-type integrase [Cucumis melo var. makuwa]4.30e-1560.32Show/hide
Query:  MELIKDYDCTIAYYPGKTNVVADALSKKIYSSRSGGKMARLQELRGFKVVLNAGTFGNLMTCF
        MELIKDYDCTI Y+ GK NV ADALS+K  S  + GK+A L ELR  K +LNA   GNL+  F
Subjt:  MELIKDYDCTIAYYPGKTNVVADALSKKIYSSRSGGKMARLQELRGFKVVLNAGTFGNLMTCF

KAA0067194.1 polyprotein [Cucumis melo var. makuwa]7.38e-2473.02Show/hide
Query:  MELIKDYDCTIAYYPGKTNVVADALSKKIYSSRSGGKMARLQELRGFKVVLNAGTFGNLMTCF
        M+LIKDYDCTIAYYP K NV+ADALS+K  S R+ G+MA L++LRGFKVVLNAGTFGN M  F
Subjt:  MELIKDYDCTIAYYPGKTNVVADALSKKIYSSRSGGKMARLQELRGFKVVLNAGTFGNLMTCF

TrEMBL top hitse value%identityAlignment
A0A5A7SUU4 Polyprotein3.4e-1052.38Show/hide
Query:  MELIKDYDCTIAYYPGKTNVVADALSKKIYSSRSGGKMARLQELRGFKVVLNAGTFGNLMTCF
        MELIKD+DCTI Y+  K NVVAD LS+K +   SGG++A LQELR +K  +++G+ G+ +  F
Subjt:  MELIKDYDCTIAYYPGKTNVVADALSKKIYSSRSGGKMARLQELRGFKVVLNAGTFGNLMTCF

A0A5A7U494 DNA/RNA polymerases superfamily protein9.9e-1056.06Show/hide
Query:  MELIKDYDCTIAYYPGKTNVVADALSKK---IYSSRSGGKMARLQELRGFKVVLNAGTFGNLMTCF
        +ELIKDYDCTI Y+PGK NVVADALS+K   + S+  G + + L ELRGFK V+ A + G L+  F
Subjt:  MELIKDYDCTIAYYPGKTNVVADALSKK---IYSSRSGGKMARLQELRGFKVVLNAGTFGNLMTCF

A0A5A7UWA6 CCHC-type integrase5.6e-1363.49Show/hide
Query:  MELIKDYDCTIAYYPGKTNVVADALSKKIYSSRSGGKMARLQELRGFKVVLNAGTFGNLMTCF
        M+LIKDYDCTI Y+ GK N++ADALS KI S R+ G+MA L+EL+GFK +L A T GNLM  F
Subjt:  MELIKDYDCTIAYYPGKTNVVADALSKKIYSSRSGGKMARLQELRGFKVVLNAGTFGNLMTCF

A0A5A7VIK8 Polyprotein1.1e-1673.02Show/hide
Query:  MELIKDYDCTIAYYPGKTNVVADALSKKIYSSRSGGKMARLQELRGFKVVLNAGTFGNLMTCF
        M+LIKDYDCTIAYYP K NV+ADALS+K  S R+ G+MA L++LRGFKVVLNAGTFGN M  F
Subjt:  MELIKDYDCTIAYYPGKTNVVADALSKKIYSSRSGGKMARLQELRGFKVVLNAGTFGNLMTCF

A0A5D3DMM3 CCHC-type integrase1.2e-1060.32Show/hide
Query:  MELIKDYDCTIAYYPGKTNVVADALSKKIYSSRSGGKMARLQELRGFKVVLNAGTFGNLMTCF
        MELIKDYDCTI Y+ GK NV ADALS+K  S  + GK+A L ELR  K +LNA   GNL+  F
Subjt:  MELIKDYDCTIAYYPGKTNVVADALSKKIYSSRSGGKMARLQELRGFKVVLNAGTFGNLMTCF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTCATTAAAGATTATGATTGCACCATCGCATACTATCCTGGAAAAACCAATGTCGTAGCCGATGCATTGAGCAAGAAGATCTACAGCTCAAGAAGTGGAGGAAA
AATGGCCCGATTACAAGAACTGAGAGGCTTCAAAGTAGTTCTAAATGCGGGGACGTTTGGGAACTTAATGACATGTTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAACTCATTAAAGATTATGATTGCACCATCGCATACTATCCTGGAAAAACCAATGTCGTAGCCGATGCATTGAGCAAGAAGATCTACAGCTCAAGAAGTGGAGGAAA
AATGGCCCGATTACAAGAACTGAGAGGCTTCAAAGTAGTTCTAAATGCGGGGACGTTTGGGAACTTAATGACATGTTTTTAG
Protein sequenceShow/hide protein sequence
MELIKDYDCTIAYYPGKTNVVADALSKKIYSSRSGGKMARLQELRGFKVVLNAGTFGNLMTCF