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IVF0009148 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009148
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUDP-glucose 4-epimerase
Genome locationchr06:5166057..5170559
RNA-Seq ExpressionIVF0009148
SyntenyIVF0009148
Gene Ontology termsGO:0006012 - galactose metabolic process (biological process)
GO:0006364 - rRNA processing (biological process)
GO:0005829 - cytosol (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003978 - UDP-glucose 4-epimerase activity (molecular function)
InterPro domainsIPR001509 - NAD-dependent epimerase/dehydratase
IPR036291 - NAD(P)-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037205.1 UDP-glucose 4-epimerase GEPI48-like [Cucumis melo var. makuwa]7.81e-62100Show/hide
Query:  MLNLNPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIGNTLNIWLFACGDW
        MLNLNPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIGNTLNIWLFACGDW
Subjt:  MLNLNPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIGNTLNIWLFACGDW

KAA0044897.1 UDP-glucose 4-epimerase GEPI48-like [Cucumis melo var. makuwa]1.44e-3994.52Show/hide
Query:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG
        +PSGYIGEDPRGIPNNLMPFVQQVAV +RPALTVFGTDYSTKDGTGVRDYIHVVDLA GHIAALRKLDAAGIG
Subjt:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG

XP_004148994.1 UDP-glucose 4-epimerase GEPI48 [Cucumis sativus]6.10e-3993.15Show/hide
Query:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG
        +PSGYIGEDPRGIPNNLMPFVQQVAV +RPALTV+GTDYSTKDGTGVRDYIHVVDLA GHIAALRKLDAAGIG
Subjt:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG

XP_008451956.1 PREDICTED: UDP-glucose 4-epimerase GEPI48-like [Cucumis melo]2.18e-3994.52Show/hide
Query:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG
        +PSGYIGEDPRGIPNNLMPFVQQVAV +RPALTVFGTDYSTKDGTGVRDYIHVVDLA GHIAALRKLDAAGIG
Subjt:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG

XP_038906664.1 UDP-glucose 4-epimerase GEPI48-like [Benincasa hispida]8.60e-3993.15Show/hide
Query:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG
        +PSGYIGEDPRGIPNNLMPFVQQVAV +RPALTVFGTDYSTKDGTGVRDYIHVVDLA GHIAALRKLD AGIG
Subjt:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG

TrEMBL top hitse value%identityAlignment
A0A0A0KYE5 UDP-glucose 4-epimerase2.9e-3193.15Show/hide
Query:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG
        +PSGYIGEDPRGIPNNLMPFVQQVAV +RPALTV+GTDYSTKDGTGVRDYIHVVDLA GHIAALRKLDAAGIG
Subjt:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG

A0A1S3BS45 UDP-glucose 4-epimerase1.3e-3194.52Show/hide
Query:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG
        +PSGYIGEDPRGIPNNLMPFVQQVAV +RPALTVFGTDYSTKDGTGVRDYIHVVDLA GHIAALRKLDAAGIG
Subjt:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG

A0A5A7T6V5 UDP-glucose 4-epimerase GEPI48-like4.2e-46100Show/hide
Query:  MLNLNPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIGNTLNIWLFACGDW
        MLNLNPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIGNTLNIWLFACGDW
Subjt:  MLNLNPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIGNTLNIWLFACGDW

A0A5A7TSN5 UDP-glucose 4-epimerase1.3e-3194.52Show/hide
Query:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG
        +PSGYIGEDPRGIPNNLMPFVQQVAV +RPALTVFGTDYSTKDGTGVRDYIHVVDLA GHIAALRKLDAAGIG
Subjt:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG

A0A6J1FNB9 UDP-glucose 4-epimerase1.1e-3090.41Show/hide
Query:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG
        +PSG+IGEDPRGIPNNLMPFVQQVAV +RPALTVFGTDYSTKDGTGVRDYIHVVDLA GHIAA+RKLDAAG+G
Subjt:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG

SwissProt top hitse value%identityAlignment
O65781 UDP-glucose 4-epimerase GEPI487.0e-3084.93Show/hide
Query:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG
        +PSGYIGEDPRGIPNNLMPFVQQVAV +RPALTVFG DY+T DGTGVRDYIHVVDLA GHIAALRKL+   IG
Subjt:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG

Q6K2E1 UDP-glucose 4-epimerase 44.5e-2980.82Show/hide
Query:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG
        +PSGY+GEDP GIPNNLMPFVQQVAV +RP+LT+FG DY+TKDGTGVRDYIHVVDLA GHIAALRKL  + IG
Subjt:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG

Q8LNZ3 UDP-glucose 4-epimerase 14.5e-2989.55Show/hide
Query:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKL
        +PSGYIGEDP GIPNNLMPFVQQVAV +RPALTV+GTDY+TKDGTGVRDYIHVVDLA GHIAALRKL
Subjt:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKL

Q9SN58 UDP-glucose 4-epimerase 51.0e-2882.19Show/hide
Query:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG
        +PSG IGEDPRGIPNNLMPFVQQVAV +RP LTVFG DY+TKDGTGVRDYIHV+DLA GHIAALRKL+   IG
Subjt:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG

Q9T0A7 UDP-glucose 4-epimerase 21.3e-2885.29Show/hide
Query:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLD
        +PSGYIGEDP G+PNNLMP+VQQVAV +RP LTVFGTDY TKDGTGVRDYIHV+DLA GHIAALRKLD
Subjt:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLD

Arabidopsis top hitse value%identityAlignment
AT1G12780.1 UDP-D-glucose/UDP-D-galactose 4-epimerase 11.3e-2373.13Show/hide
Query:  SGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDA
        SG IGEDP+GIPNNLMP++QQVAV + P L V+G DY T+DG+ VRDYIHV+DLA GHIAALRKL A
Subjt:  SGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDA

AT1G63180.1 UDP-D-glucose/UDP-D-galactose 4-epimerase 38.5e-2372.31Show/hide
Query:  SGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKL
        SG IGEDP+GIPNNLMP++QQVAV + P L VFG DY T DG+ VRDYIHV+DLA GH+AAL KL
Subjt:  SGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKL

AT1G64440.1 NAD(P)-binding Rossmann-fold superfamily protein6.3e-2672.6Show/hide
Query:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG
        +PSG IGEDP G PNNLMP+VQQV V + P L ++GTDY+TKDGTGVRDYIHVVDLA GHI AL+KLD   IG
Subjt:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG

AT4G10960.1 UDP-D-glucose/UDP-D-galactose 4-epimerase 57.1e-3082.19Show/hide
Query:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG
        +PSG IGEDPRGIPNNLMPFVQQVAV +RP LTVFG DY+TKDGTGVRDYIHV+DLA GHIAALRKL+   IG
Subjt:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG

AT4G23920.1 UDP-D-glucose/UDP-D-galactose 4-epimerase 29.3e-3085.29Show/hide
Query:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLD
        +PSGYIGEDP G+PNNLMP+VQQVAV +RP LTVFGTDY TKDGTGVRDYIHV+DLA GHIAALRKLD
Subjt:  NPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAACTTGAACCCCAGTGGCTATATTGGTGAGGATCCCCGTGGAATCCCAAACAACCTCATGCCCTTTGTACAGCAAGTTGCTGTCAGCAAGCGTCCTGCCTTGAC
AGTCTTTGGAACTGACTATTCAACAAAAGATGGAACTGGAGTACGTGATTATATTCACGTTGTTGATTTAGCTTATGGACACATTGCTGCATTGCGCAAGCTAGATGCGG
CTGGTATAGGTAATACACTCAATATCTGGCTCTTTGCTTGTGGTGACTGGTAA
mRNA sequenceShow/hide mRNA sequence
GCTACAGGGACCGGAGAATATCAATGAAAGAAATTGCATTAAGTGCACTTTCGGAAATTATCCAAATGGAACATATGTTGTTTCTATGACATGGTATTTTTTCAAAATTC
TTGAATTCTCTTGTCATACTGCTTTGCTAATGCTTCTTATTGGATTTGCTTCTTGCTTGAATGTAAATGTCTGACCTTGTCATTTGTTGATTTCATTTCTAATTACTTGT
AATTTTGTTGTTCTCACGACTGTAGTTGTTTTGTCTCTAAAGCATGTATATTACTTTATTTTGAAAAGAAACTATTTTGTTGAATTAAACAAAATACGGGCGAGGAAAGC
TTCAACTTAAATTTTGGAAGCTGCAATTAAAACCTTTCCATTCCATAGAGAAGAAAATCATGGTTACGGAAGGTCCGGATGGATCAAGAAAGAGTGAGAAAGAGCAATAC
GATCCTGCAAAACAGAAAACAATTGCCCATCTCATTAAAAATGTTCTATGAATTCTTTGAAGCCATAAAATCCAAAAGTAAACAGACATGAATTAGATTCATCTTCATCC
AGATAGTGTTGGATTATGGCAGATTCTATTCGTGGTTGATTATTGATATTGGGTTGTGTTTCTTTTAGACTTTTCTATTTGTTTGTGCATCCATTTTGTTGAATTGATTT
GTGTTTTGTTTTCTTAACTACTGTGTTGTCTTTTGTACATTATATGTTGAATGCATTTTGTAAATGCAATATAGTTTTGGTGTAATCGAGTTCATGTTTAGAATAATTAA
ATTAGAGAGTTTCAATTATTTCTTGTGATGAGATCGCATAAAATGAATTTATAATGATAAAAGTTTGTTTATACTAAATTTGGGTTTAGCACACAAACATTTAACTTGTG
TGCTTTGCTATTTGTTTATGTTGAACTTGAACCCCAGTGGCTATATTGGTGAGGATCCCCGTGGAATCCCAAACAACCTCATGCCCTTTGTACAGCAAGTTGCTGTCAGC
AAGCGTCCTGCCTTGACAGTCTTTGGAACTGACTATTCAACAAAAGATGGAACTGGAGTACGTGATTATATTCACGTTGTTGATTTAGCTTATGGACACATTGCTGCATT
GCGCAAGCTAGATGCGGCTGGTATAGGTAATACACTCAATATCTGGCTCTTTGCTTGTGGTGACTGGTAATGCATAGTAGATTTTCCTTATCCAGTTTTTATTTATGTTT
AAGAACCATTATGGAGGATACTTGGTATATTTACCCCAAGTTTCTATTTTGAGCCTTAATAACACTCATAATGCCGCGAGAATACCATGGATACTAAGGAAAATTCCTAC
ATTACATGAGAGAGTAATGTTTACAGCTAGTGTATAATTAATGTTTTGGGTTAAACAAAAAAGTCTCCGGTTCATTACTTTGTGGCCTAAAATGTTGGTTACTATCCTGT
TAAATTAATACCACTCTGGGCACTTAATTATTATTTTCCGCCAAGGAAGCAATTTATTTGTGTTCATATTTTCTTGCAACCTTCTGATTTCTTCTTTCAAAATTTTCCTT
TTCTTTTAATAACCACAACTGCTAATAATGACAAATGAAAATTAAACCATCAAAGAGTTTGAGCGGTATATGTCATGAATATCATAATAGGTTGTGAAGTTTACAATTTG
GGAACTGGAAAGGGTACATAAGTCTTGGAGATGGTTGCAGGTTTTGAAAAGGCATCTGAAAAGGTATTTTTACTCTACTTCTTTTGCATTTGTTTCCTAAAAACTTGACA
GAATTAAGGGCGTTCATGGTTATAAGAAATGTGCCCCTAGTTTCAATGCCTTCCTCTAACTATGGTATAATAGGCTTAATTTAAATGAAAATAATGGGATTCATATCTAG
GATTTTAGTTTTTAGATTAGATGATACCATGATTCCAAATACTATCCCCCATCCACAACAGACACTACCACCACGAGTTCTTGTCCTCTTGAACTCCCTATCTTTGAGTG
CTTCTTTATCCAATCATGGCTCTACTTCACCTCCCATCTGAATTTACTAGTTAATTTCTCTGTTTCAGAAAATTCCTTTTGTGATGTCTGCACGCCGACCTGGTGATGTT
GAAATTGTCTACGCATCGACACACAAAGCAGAAAAGGAGTTAAACTGAAAGTTTTGCAAGAATCCATTGGAGCAGTGAAGCCATATTTGCGGCAATTCATTGATGTATAG
GCCTTTTTGTAGGTTTGGTAGCAAAGTTTTGGTTCAAATGTACTTATTTAAATAGCTCGTTTGTACCAAAACATATATGTTCATTGCTTCATTGTACAAACATTTTACCA
ACAATTGTACAATATTAGAAAGTGTATGTTAAAGTAAATATATTAAAGCATTCACCATTTTTTT
Protein sequenceShow/hide protein sequence
MLNLNPSGYIGEDPRGIPNNLMPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIGNTLNIWLFACGDW