; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0009174 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009174
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein PAF1-like protein
Genome locationchr01:32958045..32963410
RNA-Seq ExpressionIVF0009174
SyntenyIVF0009174
Gene Ontology termsGO:0006368 - transcription elongation from RNA polymerase II promoter (biological process)
GO:0016570 - histone modification (biological process)
GO:0016593 - Cdc73/Paf1 complex (cellular component)
GO:0000993 - RNA polymerase II complex binding (molecular function)
GO:0003682 - chromatin binding (molecular function)
InterPro domainsIPR007133 - RNA polymerase II associated factor Paf1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051046.1 protein PAF1-like protein [Cucumis melo var. makuwa]0.080.41Show/hide
Query:  MASYRPYPPQSSFGSAPAQNSIPPPPSQSASASSQQRGGATTQYNQNWGAYAGDASGPPAPSSSYPKITTTNFIKLLITTINSMVLQNPTPSTSSSSPV-
        MASYRPYPPQSSFGSAPAQNSIPPPPSQSASASSQQRGGATTQYNQNWGAYAGDASGPPAPSSSYP+    N+   L  T N    Q  TP T    P  
Subjt:  MASYRPYPPQSSFGSAPAQNSIPPPPSQSASASSQQRGGATTQYNQNWGAYAGDASGPPAPSSSYPKITTTNFIKLLITTINSMVLQNPTPSTSSSSPV-

Query:  ----LSLCTSTTAPPPPDSSYPPPPPPPAPSQPPNLYYPSSQYSQVNAATTSALISTTEFFNPPTST------PNSPPPPSASQQKAEGKNMGAHERDKG
                     PPPPDSSYPPPPPPPAPSQPPNLYYPSSQYSQ N    S          PP+S+      PNSPPPPSASQQKAEGKNMGAHERDKG
Subjt:  ----LSLCTSTTAPPPPDSSYPPPPPPPAPSQPPNLYYPSSQYSQVNAATTSALISTTEFFNPPTST------PNSPPPPSASQQKAEGKNMGAHERDKG

Query:  VSKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKLRRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERK
        VSKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKLR KKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERK
Subjt:  VSKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKLRRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERK

Query:  ATPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELL
        ATPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELL
Subjt:  ATPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELL

Query:  RDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILET---------SIIASFEACKSRPIHATNKNLILY
        RDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILE           I ASFEACKSRPIHATNKNL   
Subjt:  RDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILET---------SIIASFEACKSRPIHATNKNLILY

Query:  RTYFVFVFLTLLVDPF-----------------------------QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVR
            +        DPF                             QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVR
Subjt:  RTYFVFVFLTLLVDPF-----------------------------QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVR

Query:  GDNVDDPTTYLVSFDDSEARYVPLPTSLFLEKKGLKKG
        GDNVDDPTTYLVSFDDSEARYVPLPT L L KK  K+G
Subjt:  GDNVDDPTTYLVSFDDSEARYVPLPTSLFLEKKGLKKG

KAE8646532.1 hypothetical protein Csa_015972 [Cucumis sativus]2.13e-30776.56Show/hide
Query:  MASYRPYPPQSSFGSAPAQNSIPPPPSQSASASSQQRGGATTQYNQNWGAYAGDASGPPAPSSSYPKITTTNFIKLLITTINSMVLQNPTPSTSSSSPVL
        MASYRPYPPQSSFGSAPAQNSIPPP +QSAS SSQQRGGATTQYNQNWG YAGDAS PPAPSSSYP+    N+   L  T N                  
Subjt:  MASYRPYPPQSSFGSAPAQNSIPPPPSQSASASSQQRGGATTQYNQNWGAYAGDASGPPAPSSSYPKITTTNFIKLLITTINSMVLQNPTPSTSSSSPVL

Query:  SLCTSTTAPPPPDSSYPPPPPPPAPSQPPNLYYPSSQYSQVNAATTSALISTTEFFNPPTSTPNSPPPPSASQQKAEGKNMGAHERDKGVSKDPSYGRRD
                                        Y   QY+ VNAATTSALISTTEFFNPP   PNSPPPPSASQQKAEG NMGAHERDKGV KDPSYGRRD
Subjt:  SLCTSTTAPPPPDSSYPPPPPPPAPSQPPNLYYPSSQYSQVNAATTSALISTTEFFNPPTSTPNSPPPPSASQQKAEGKNMGAHERDKGVSKDPSYGRRD

Query:  RENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKLRRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATPFLSGERIE
        RENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEK+LR KKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATPFLSGERIE
Subjt:  RENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKLRRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATPFLSGERIE

Query:  NRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELLRDDVLKTPVKK
        NRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNP SVR+PLAPEDEELLRDDVLKTPVKK
Subjt:  NRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELLRDDVLKTPVKK

Query:  DGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILET---------SIIASFEACKSRPIHATNKNLILYRTYFVFVFLTL
        DGGIKRKERPTDKGVAWLVKTQYISPLSIES KQSLTEKQAKELREMKGGRNILE           I ASFEACKSRPIHATNKNL       +      
Subjt:  DGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILET---------SIIASFEACKSRPIHATNKNLILYRTYFVFVFLTL

Query:  LVDPF-----------------------------QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNVDDPTTYL
          DPF                             QAIMKSYMAT SDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNVDDPTTYL
Subjt:  LVDPF-----------------------------QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNVDDPTTYL

Query:  VSFDDSEARYVPLPTSLFLEKKGLKKG
        VSFDD+EARYVPLPT L L KK  K+G
Subjt:  VSFDDSEARYVPLPTSLFLEKKGLKKG

XP_004141783.2 LOW QUALITY PROTEIN: protein PAF1 homolog [Cucumis sativus]1.09e-31577.81Show/hide
Query:  MASYRPYPPQSSFGSAPAQNSIPPPPSQSASASSQQRGGATTQYNQNWGAYAGDASGPPAPSSSYPKITTTNFIKLLITTINSMVLQNPTPSTSSSSPV-
        MASYRPYPPQSSFGSAPAQNSIPPP +QSAS SSQQRGGATTQYNQNWG YAGDAS PPAPSSSYP+    N+   L  T N    Q   P T    P  
Subjt:  MASYRPYPPQSSFGSAPAQNSIPPPPSQSASASSQQRGGATTQYNQNWGAYAGDASGPPAPSSSYPKITTTNFIKLLITTINSMVLQNPTPSTSSSSPV-

Query:  ------LSLCTSTTAPPPPDSSYPPPPPPPAPSQPPNLYYPSSQYSQVNAATTSALISTTEFFNPPTST------PNSPPPPSASQQKAEGKNMGAHERD
                       PPPPDSSYPPPPPPPA SQPPNLYYPSSQYSQ N    S          PP+S+      PNSPPPPSASQQKAEG NMGAHERD
Subjt:  ------LSLCTSTTAPPPPDSSYPPPPPPPAPSQPPNLYYPSSQYSQVNAATTSALISTTEFFNPPTST------PNSPPPPSASQQKAEGKNMGAHERD

Query:  KGVSKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKLRRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGE
        KGV KDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEK+LR KKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGE
Subjt:  KGVSKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKLRRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGE

Query:  RKATPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEE
        RKATPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNP SVR+PLAPEDEE
Subjt:  RKATPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEE

Query:  LLRDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILET---------SIIASFEACKSRPIHATNKNLI
        LLRDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIES KQSLTEKQAKELREMKGGRNILE           I ASFEACKSRPIHATNKNL 
Subjt:  LLRDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILET---------SIIASFEACKSRPIHATNKNLI

Query:  LYRTYFVFVFLTLLVDPF-----------------------------QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWD
              +        DPF                             QAIMKSYMAT SDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWD
Subjt:  LYRTYFVFVFLTLLVDPF-----------------------------QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWD

Query:  VRGDNVDDPTTYLVSFDDSEARYVPLPTSLFLEKKGLKKG
        VRGDNVDDPTTYLVSFDD+EARYVPLPT L L KK  K+G
Subjt:  VRGDNVDDPTTYLVSFDDSEARYVPLPTSLFLEKKGLKKG

XP_008462415.1 PREDICTED: LOW QUALITY PROTEIN: protein PAF1 homolog [Cucumis melo]0.080.25Show/hide
Query:  MASYRPYPPQSSFGSAPAQNSIPPPPSQSASASSQQRGGATTQYNQNWGAYAGDASGPPAPSSSYPKITTTNFIKLLITTINSMVLQNPTPSTSSSSPV-
        MASYRPYPPQSSFGSAPAQNSIPPPPSQSASASSQQRGGATTQYNQNWGAYAGDAS PPAPSSSYP+    N+   L  T N    Q  TP T    P  
Subjt:  MASYRPYPPQSSFGSAPAQNSIPPPPSQSASASSQQRGGATTQYNQNWGAYAGDASGPPAPSSSYPKITTTNFIKLLITTINSMVLQNPTPSTSSSSPV-

Query:  ----LSLCTSTTAPPPPDSSYPPPPPPPAPSQPPNLYYPSSQYSQVNAATTSALISTTEFFNPPTST------PNSPPPPSASQQKAEGKNMGAHERDKG
                     PPPPDSSYPPPPPPPAPSQPPNLYYPSSQYSQ N    S          PP+S+      PNSPPPPSASQQKAEGKNMGAHERDKG
Subjt:  ----LSLCTSTTAPPPPDSSYPPPPPPPAPSQPPNLYYPSSQYSQVNAATTSALISTTEFFNPPTST------PNSPPPPSASQQKAEGKNMGAHERDKG

Query:  VSKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKLRRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERK
        VSKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKLR KKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERK
Subjt:  VSKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKLRRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERK

Query:  ATPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELL
        ATPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELL
Subjt:  ATPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELL

Query:  RDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILET---------SIIASFEACKSRPIHATNKNLILY
        RDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILE           I ASFEACKSRPIHATNKNL   
Subjt:  RDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILET---------SIIASFEACKSRPIHATNKNLILY

Query:  RTYFVFVFLTLLVDPF-----------------------------QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVR
            +        DPF                             QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVR
Subjt:  RTYFVFVFLTLLVDPF-----------------------------QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVR

Query:  GDNVDDPTTYLVSFDDSEARYVPLPTSLFLEKKGLKKG
        GDNVDDPTTYLVSFDDSEARYVPLPT L L KK  K+G
Subjt:  GDNVDDPTTYLVSFDDSEARYVPLPTSLFLEKKGLKKG

XP_038898523.1 protein PAF1 homolog [Benincasa hispida]5.82e-30375.95Show/hide
Query:  MASYRPYPPQSSFGSAPAQNSIPPPPSQSASASSQQRGGATTQYNQNWGAYAGDASGPPAPSSSYPKI-----TTTNFIKLLITTINSMVLQNPTPSTSS
        MASYRPYPPQSSFG AP QN +PPPP+QSAS  +QQRGG + QYNQNWG Y GD S PPA SSSYP+       ++N+ +       S     P P  + 
Subjt:  MASYRPYPPQSSFGSAPAQNSIPPPPSQSASASSQQRGGATTQYNQNWGAYAGDASGPPAPSSSYPKI-----TTTNFIKLLITTINSMVLQNPTPSTSS

Query:  SSPVLSLCTSTTAPPPPDSSYPPPPPPPAPSQPPNLYYPSSQYSQVNAATTSALISTTEFFNPPTSTPNSPPPPSASQQKAEGKNMGAHERDKGVSKDPS
        S P          PPPPDSSYPPPPPPPAPSQPPNLYYP SQ  Q     +S   S++    PP   PNSPPP SA QQKAEG NMGAHERDKGVSKDPS
Subjt:  SSPVLSLCTSTTAPPPPDSSYPPPPPPPAPSQPPNLYYPSSQYSQVNAATTSALISTTEFFNPPTSTPNSPPPPSASQQKAEGKNMGAHERDKGVSKDPS

Query:  YGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKLRRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATPFLS
        YGRRDRENSNHDKHQ+HSGPPMPPKKANGPSGRMETDDEK+LR KKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGK HGSIVGSRMGERKATPFLS
Subjt:  YGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKLRRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATPFLS

Query:  GERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELLRDDVLK
        GERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVR+PLAPEDEELLRDDVLK
Subjt:  GERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELLRDDVLK

Query:  TPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILET---------SIIASFEACKSRPIHATNKNLILYRTYFVF
        TPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIES KQSLTEKQAKELREMKGGRNILE           I ASFEACKSRP+HATNKNL       + 
Subjt:  TPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILET---------SIIASFEACKSRPIHATNKNLILYRTYFVF

Query:  VFLTLLVDPF-----------------------------QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNVDD
               DPF                             QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNVDD
Subjt:  VFLTLLVDPF-----------------------------QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNVDD

Query:  PTTYLVSFDDSEARYVPLPTSLFLEKKGLKKG
        PTTYLVSFDD+EARYVPLPT L L KK  K+G
Subjt:  PTTYLVSFDDSEARYVPLPTSLFLEKKGLKKG

TrEMBL top hitse value%identityAlignment
A0A0A0KCT6 Uncharacterized protein1.2e-25377.81Show/hide
Query:  MASYRPYPPQSSFGSAPAQNSIPPPPSQSASASSQQRGGATTQYNQNWGAYAGDASGPPAPSSSYPKITTTNFIKLLITTINSMVLQNPTPSTSSSSP--
        MASYRPYPPQSSFGSAPAQNSIPPP +QSAS SSQQRGGATTQYNQNWG YAGDAS PPAPSSSYP+    N+   L  T N    Q   P T    P  
Subjt:  MASYRPYPPQSSFGSAPAQNSIPPPPSQSASASSQQRGGATTQYNQNWGAYAGDASGPPAPSSSYPKITTTNFIKLLITTINSMVLQNPTPSTSSSSP--

Query:  -----VLSLCTSTTAPPPPDSSYPPPPPPPAPSQPPNLYYPSSQYSQVNAATTSALISTTEFFNPPTST------PNSPPPPSASQQKAEGKNMGAHERD
                       PPPPDSSYPPPPPPPA SQPPNLYYPSSQYSQ N    S          PP+S+      PNSPPPPSASQQKAEG NMGAHERD
Subjt:  -----VLSLCTSTTAPPPPDSSYPPPPPPPAPSQPPNLYYPSSQYSQVNAATTSALISTTEFFNPPTST------PNSPPPPSASQQKAEGKNMGAHERD

Query:  KGVSKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKLRRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGE
        KGV KDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEK+L RKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGE
Subjt:  KGVSKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKLRRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGE

Query:  RKATPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEE
        RKATPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNP SVR+PLAPEDEE
Subjt:  RKATPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEE

Query:  LLRDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILET---------SIIASFEACKSRPIHATNKNLI
        LLRDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIES KQSLTEKQAKELREMKGGRNILE           I ASFEACKSRPIHATNKNL 
Subjt:  LLRDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILET---------SIIASFEACKSRPIHATNKNLI

Query:  LYRTYFVFVFLTLLVDPF-----------------------------QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWD
              +        DPF                             QAIMKSYMAT SDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWD
Subjt:  LYRTYFVFVFLTLLVDPF-----------------------------QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWD

Query:  VRGDNVDDPTTYLVSFDDSEARYVPLPTSLFLEKKGLKKG
        VRGDNVDDPTTYLVSFDD+EARYVPLPT L L KK  K+G
Subjt:  VRGDNVDDPTTYLVSFDDSEARYVPLPTSLFLEKKGLKKG

A0A1S3CHF3 LOW QUALITY PROTEIN: protein PAF1 homolog9.1e-26280.25Show/hide
Query:  MASYRPYPPQSSFGSAPAQNSIPPPPSQSASASSQQRGGATTQYNQNWGAYAGDASGPPAPSSSYPKITTTNFIKLLITTINSMVLQNPTPSTSSSSP--
        MASYRPYPPQSSFGSAPAQNSIPPPPSQSASASSQQRGGATTQYNQNWGAYAGDAS PPAPSSSYP+    N+   L  T N    Q  TP T    P  
Subjt:  MASYRPYPPQSSFGSAPAQNSIPPPPSQSASASSQQRGGATTQYNQNWGAYAGDASGPPAPSSSYPKITTTNFIKLLITTINSMVLQNPTPSTSSSSP--

Query:  ---VLSLCTSTTAPPPPDSSYPPPPPPPAPSQPPNLYYPSSQYSQVNAATTSALISTTEFFNPPTST------PNSPPPPSASQQKAEGKNMGAHERDKG
                     PPPPDSSYPPPPPPPAPSQPPNLYYPSSQYSQ N    S          PP+S+      PNSPPPPSASQQKAEGKNMGAHERDKG
Subjt:  ---VLSLCTSTTAPPPPDSSYPPPPPPPAPSQPPNLYYPSSQYSQVNAATTSALISTTEFFNPPTST------PNSPPPPSASQQKAEGKNMGAHERDKG

Query:  VSKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKLRRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERK
        VSKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKL RKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERK
Subjt:  VSKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKLRRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERK

Query:  ATPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELL
        ATPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELL
Subjt:  ATPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELL

Query:  RDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILET---------SIIASFEACKSRPIHATNKNLILY
        RDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILE           I ASFEACKSRPIHATNKNL   
Subjt:  RDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILET---------SIIASFEACKSRPIHATNKNLILY

Query:  RTYFVFVFLTLLVDPF-----------------------------QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVR
            +        DPF                             QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVR
Subjt:  RTYFVFVFLTLLVDPF-----------------------------QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVR

Query:  GDNVDDPTTYLVSFDDSEARYVPLPTSLFLEKKGLKKG
        GDNVDDPTTYLVSFDDSEARYVPLPT L L KK  K+G
Subjt:  GDNVDDPTTYLVSFDDSEARYVPLPTSLFLEKKGLKKG

A0A5A7UA23 Protein PAF1-like protein6.3e-26380.41Show/hide
Query:  MASYRPYPPQSSFGSAPAQNSIPPPPSQSASASSQQRGGATTQYNQNWGAYAGDASGPPAPSSSYPKITTTNFIKLLITTINSMVLQNPTPSTSSSSP--
        MASYRPYPPQSSFGSAPAQNSIPPPPSQSASASSQQRGGATTQYNQNWGAYAGDASGPPAPSSSYP+    N+   L  T N    Q  TP T    P  
Subjt:  MASYRPYPPQSSFGSAPAQNSIPPPPSQSASASSQQRGGATTQYNQNWGAYAGDASGPPAPSSSYPKITTTNFIKLLITTINSMVLQNPTPSTSSSSP--

Query:  ---VLSLCTSTTAPPPPDSSYPPPPPPPAPSQPPNLYYPSSQYSQVNAATTSALISTTEFFNPPTST------PNSPPPPSASQQKAEGKNMGAHERDKG
                     PPPPDSSYPPPPPPPAPSQPPNLYYPSSQYSQ N    S          PP+S+      PNSPPPPSASQQKAEGKNMGAHERDKG
Subjt:  ---VLSLCTSTTAPPPPDSSYPPPPPPPAPSQPPNLYYPSSQYSQVNAATTSALISTTEFFNPPTST------PNSPPPPSASQQKAEGKNMGAHERDKG

Query:  VSKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKLRRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERK
        VSKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKL RKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERK
Subjt:  VSKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKLRRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERK

Query:  ATPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELL
        ATPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELL
Subjt:  ATPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELL

Query:  RDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILET---------SIIASFEACKSRPIHATNKNLILY
        RDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILE           I ASFEACKSRPIHATNKNL   
Subjt:  RDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILET---------SIIASFEACKSRPIHATNKNLILY

Query:  RTYFVFVFLTLLVDPF-----------------------------QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVR
            +        DPF                             QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVR
Subjt:  RTYFVFVFLTLLVDPF-----------------------------QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVR

Query:  GDNVDDPTTYLVSFDDSEARYVPLPTSLFLEKKGLKKG
        GDNVDDPTTYLVSFDDSEARYVPLPT L L KK  K+G
Subjt:  GDNVDDPTTYLVSFDDSEARYVPLPTSLFLEKKGLKKG

A0A6J1GN64 protein PAF1 homolog4.3e-23573.17Show/hide
Query:  MASYRPYPPQSSFGSAPAQNSIPPPPS-QSASASSQQRGGATTQYNQNWGAYAGDAS-GPPAPSSSYPK-----ITTTNFIKLLITTINSMVLQNPTPST
        MASYRPYPPQSSFG +P QN IPPPP+  +AS  +QQRGG  +QYNQNWG Y GD S  PPA SSSYP+       ++N+ +       S     P P  
Subjt:  MASYRPYPPQSSFGSAPAQNSIPPPPS-QSASASSQQRGGATTQYNQNWGAYAGDAS-GPPAPSSSYPK-----ITTTNFIKLLITTINSMVLQNPTPST

Query:  SSSSPVLSLCTSTTAPPPPDSSYPPPPPPPAPSQPPNLYYPSSQYSQVNAATTSALISTTEFFNPPTST-------PNSPPPPSASQQKAEGKNMGAHER
         S             PPPPDSSYPPPPPPPA SQP   Y+P SQY Q N    S         +PP S+       PNSPPPPSA QQK EG ++GAHER
Subjt:  SSSSPVLSLCTSTTAPPPPDSSYPPPPPPPAPSQPPNLYYPSSQYSQVNAATTSALISTTEFFNPPTST-------PNSPPPPSASQQKAEGKNMGAHER

Query:  DKGVSKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKLRRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMG
        DKGVSKDPSYGRR+RENSNHDKHQ+HSGPPMPPKK+NGPSGR+ETDDEK+ +RKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGK HGSIVGSRMG
Subjt:  DKGVSKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKLRRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMG

Query:  ERKATPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDE
        ERKATPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVR+PLAPEDE
Subjt:  ERKATPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDE

Query:  ELLRDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILET---------SIIASFEACKSRPIHATNKNL
        ELLRDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILE           I ASFEACKSRP+HATNKNL
Subjt:  ELLRDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILET---------SIIASFEACKSRPIHATNKNL

Query:  ILYRTYFVFVFLTLLVDPF-----------------------------QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHW
               +        DPF                             QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHW
Subjt:  ILYRTYFVFVFLTLLVDPF-----------------------------QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHW

Query:  DVRGDNVDDPTTYLVSFDDSEARYVPLPTSLFLEKKGLKKG
        DVRGDNVDDPTTYLVSFDD+EARYVPLPT L L KK  K+G
Subjt:  DVRGDNVDDPTTYLVSFDDSEARYVPLPTSLFLEKKGLKKG

A0A6J1JP14 protein PAF1 homolog1.4e-23372.7Show/hide
Query:  MASYRPYPPQSSFGSAPAQNSIPPPPS-QSASASSQQRGGATTQYNQNWGAYAGDAS-GPPAPSSSYPK-----ITTTNFIKLLITTINSMVLQNPTPST
        MASYRPYPPQSSFG +P QN IPPPP+  +AS  +QQRG  ++QYNQNWG Y GD S  PPA SSSYP+       ++N+ +       S     P P  
Subjt:  MASYRPYPPQSSFGSAPAQNSIPPPPS-QSASASSQQRGGATTQYNQNWGAYAGDAS-GPPAPSSSYPK-----ITTTNFIKLLITTINSMVLQNPTPST

Query:  SSSSPVLSLCTSTTAPPPPDSSYPPPPPPPAPSQPPNLYYPSSQYSQVNAATTSALISTTEFFNPPTST-------PNSPPPPSASQQKAEGKNMGAHER
         S             PPPPDSSYPPPPPPPA SQP   Y+P SQY Q N    S         +PP S+       PNSPPPPSA Q K EG ++GAHER
Subjt:  SSSSPVLSLCTSTTAPPPPDSSYPPPPPPPAPSQPPNLYYPSSQYSQVNAATTSALISTTEFFNPPTST-------PNSPPPPSASQQKAEGKNMGAHER

Query:  DKGVSKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKLRRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMG
        DKGV+KDPSYGRR+RENSNHDKHQ+HSGPPMPPKK+NGPSGR+ETDDEK+ +RKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGK HGSIVGSRMG
Subjt:  DKGVSKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKLRRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMG

Query:  ERKATPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDE
        ERKATPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVR+PLAPEDE
Subjt:  ERKATPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDE

Query:  ELLRDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILET---------SIIASFEACKSRPIHATNKNL
        ELLRDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILE           I ASFEACKSRP+HATNKNL
Subjt:  ELLRDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILET---------SIIASFEACKSRPIHATNKNL

Query:  ILYRTYFVFVFLTLLVDPF-----------------------------QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHW
               +        DPF                             QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHW
Subjt:  ILYRTYFVFVFLTLLVDPF-----------------------------QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHW

Query:  DVRGDNVDDPTTYLVSFDDSEARYVPLPTSLFLEKKGLKKG
        DVRGDNVDDPTTYLVSFDD+EARYVPLPT L L KK  K+G
Subjt:  DVRGDNVDDPTTYLVSFDDSEARYVPLPTSLFLEKKGLKKG

SwissProt top hitse value%identityAlignment
F4HQA1 Protein PAF1 homolog3.5e-11751.03Show/hide
Query:  STTAPPPPDSSYPPPPPPPAPSQ-----------PPNLYYPSS-QYSQVNAATTSALISTTEFFNPPTSTPNSPPPPSASQQKAEGKNMGAHERDKGVSK
        ++ APPPP  S PPP PPP PS            PP+ YY     Y Q N               PP   P++PPP      + +G N    + +KG SK
Subjt:  STTAPPPPDSSYPPPPPPPAPSQ-----------PPNLYYPSS-QYSQVNAATTSALISTTEFFNPPTSTPNSPPPPSASQQKAEGKNMGAHERDKGVSK

Query:  DPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKLRRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATP
            GRR+R   +  KH   S  P         S ++ET++E++L RKKRE EKQRQDE+HR  +K S  + + K                   E+K TP
Subjt:  DPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKLRRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATP

Query:  FLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELLRDD
         L+ +R+ENRLKKPTTF+CKLKFRNELPD SAQ KLM+++++KD +T+YTITSLEK +KP+++VEPDLGIPLDLLDLSVYNPP V+ PLAPEDEELLRDD
Subjt:  FLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELLRDD

Query:  VLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILET---------SIIASFEACKSRPIHATNKNL-----I
           TP+KKD GI+RKERPTDKG++WLVKTQYIS ++ ES +QSLTEKQAKELREMKGG NIL            I ASFEACKSRP+HATNKNL     +
Subjt:  VLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILET---------SIIASFEACKSRPIHATNKNL-----I

Query:  LYRTYF-----VFVFLTL------------LVDP-------FQAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDN
            YF      FV                 +DP        +AI+KSY+  GSD + PEKFLAYMVPS DELSKDI+DE E++SY+WVREY WDV+  N
Subjt:  LYRTYF-----VFVFLTL------------LVDP-------FQAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDN

Query:  VDDPTTYLVSFDDSEARYVPLPTSLFLEKKGLKKG
         +DP TYLVSFD+  A Y+PLP  L L KK  ++G
Subjt:  VDDPTTYLVSFDDSEARYVPLPTSLFLEKKGLKKG

Q2KJ14 RNA polymerase II-associated factor 1 homolog1.7e-1526.42Show/hide
Query:  LCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELLRDDVLKTPVKKDGGIKRKER
        +C++K+ N LPD    PK ++   +++ + +Y  TSLEK +K  L  EPDLG+ +DL++   Y      V L P DE+LL +++ + P        ++ +
Subjt:  LCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELLRDDVLKTPVKKDGGIKRKER

Query:  PTDKGVAWLVKTQYISP------LSIE--STKQSLTEKQAKELREMKGGRNILETSIIASFE-ACKSRPIHATNKNLILYRTYFVFVFLTLLVDPFQAI-
           K V W+ KT+YIS       +S E    K  ++ KQ     E+   R+   T+I  +FE A KS   H +   +       VF    + ++P   + 
Subjt:  PTDKGVAWLVKTQYISP------LSIE--STKQSLTEKQAKELREMKGGRNILETSIIASFE-ACKSRPIHATNKNLILYRTYFVFVFLTLLVDPFQAI-

Query:  ------------------MKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYS--------WVREYHWDVRGD-NVDDPTTYLVSFDDSEARY
                          M   M  G    +  +F+AY +P  + L K   D++E++ Y+          REY+W+V+   +      Y   F + +  Y
Subjt:  ------------------MKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYS--------WVREYHWDVRGD-NVDDPTTYLVSFDDSEARY

Query:  V-PLPTSLFLEKKGLKKG
           L T + L K+  K G
Subjt:  V-PLPTSLFLEKKGLKKG

Q5RAX0 RNA polymerase II-associated factor 1 homolog1.7e-1526.42Show/hide
Query:  LCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELLRDDVLKTPVKKDGGIKRKER
        +C++K+ N LPD    PK ++   +++ + +Y  TSLEK +K  L  EPDLG+ +DL++   Y      V L P DE+LL +++ + P        ++ +
Subjt:  LCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELLRDDVLKTPVKKDGGIKRKER

Query:  PTDKGVAWLVKTQYISP------LSIE--STKQSLTEKQAKELREMKGGRNILETSIIASFE-ACKSRPIHATNKNLILYRTYFVFVFLTLLVDPFQAI-
           K V W+ KT+YIS       +S E    K  ++ KQ     E+   R+   T+I  +FE A KS   H +   +       VF    + ++P   + 
Subjt:  PTDKGVAWLVKTQYISP------LSIE--STKQSLTEKQAKELREMKGGRNILETSIIASFE-ACKSRPIHATNKNLILYRTYFVFVFLTLLVDPFQAI-

Query:  ------------------MKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYS--------WVREYHWDVRGD-NVDDPTTYLVSFDDSEARY
                          M   M  G    +  +F+AY +P  + L K   D++E++ Y+          REY+W+V+   +      Y   F + +  Y
Subjt:  ------------------MKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYS--------WVREYHWDVRGD-NVDDPTTYLVSFDDSEARY

Query:  V-PLPTSLFLEKKGLKKG
           L T + L K+  K G
Subjt:  V-PLPTSLFLEKKGLKKG

Q8K2T8 RNA polymerase II-associated factor 1 homolog1.7e-1526.42Show/hide
Query:  LCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELLRDDVLKTPVKKDGGIKRKER
        +C++K+ N LPD    PK ++   +++ + +Y  TSLEK +K  L  EPDLG+ +DL++   Y      V L P DE+LL +++ + P        ++ +
Subjt:  LCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELLRDDVLKTPVKKDGGIKRKER

Query:  PTDKGVAWLVKTQYISP------LSIE--STKQSLTEKQAKELREMKGGRNILETSIIASFE-ACKSRPIHATNKNLILYRTYFVFVFLTLLVDPFQAI-
           K V W+ KT+YIS       +S E    K  ++ KQ     E+   R+   T+I  +FE A KS   H +   +       VF    + ++P   + 
Subjt:  PTDKGVAWLVKTQYISP------LSIE--STKQSLTEKQAKELREMKGGRNILETSIIASFE-ACKSRPIHATNKNLILYRTYFVFVFLTLLVDPFQAI-

Query:  ------------------MKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYS--------WVREYHWDVRGD-NVDDPTTYLVSFDDSEARY
                          M   M  G    +  +F+AY +P  + L K   D++E++ Y+          REY+W+V+   +      Y   F + +  Y
Subjt:  ------------------MKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYS--------WVREYHWDVRGD-NVDDPTTYLVSFDDSEARY

Query:  V-PLPTSLFLEKKGLKKG
           L T + L K+  K G
Subjt:  V-PLPTSLFLEKKGLKKG

Q8N7H5 RNA polymerase II-associated factor 1 homolog1.7e-1526.42Show/hide
Query:  LCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELLRDDVLKTPVKKDGGIKRKER
        +C++K+ N LPD    PK ++   +++ + +Y  TSLEK +K  L  EPDLG+ +DL++   Y      V L P DE+LL +++ + P        ++ +
Subjt:  LCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELLRDDVLKTPVKKDGGIKRKER

Query:  PTDKGVAWLVKTQYISP------LSIE--STKQSLTEKQAKELREMKGGRNILETSIIASFE-ACKSRPIHATNKNLILYRTYFVFVFLTLLVDPFQAI-
           K V W+ KT+YIS       +S E    K  ++ KQ     E+   R+   T+I  +FE A KS   H +   +       VF    + ++P   + 
Subjt:  PTDKGVAWLVKTQYISP------LSIE--STKQSLTEKQAKELREMKGGRNILETSIIASFE-ACKSRPIHATNKNLILYRTYFVFVFLTLLVDPFQAI-

Query:  ------------------MKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYS--------WVREYHWDVRGD-NVDDPTTYLVSFDDSEARY
                          M   M  G    +  +F+AY +P  + L K   D++E++ Y+          REY+W+V+   +      Y   F + +  Y
Subjt:  ------------------MKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYS--------WVREYHWDVRGD-NVDDPTTYLVSFDDSEARY

Query:  V-PLPTSLFLEKKGLKKG
           L T + L K+  K G
Subjt:  V-PLPTSLFLEKKGLKKG

Arabidopsis top hitse value%identityAlignment
AT1G79730.1 hydroxyproline-rich glycoprotein family protein2.5e-11851.03Show/hide
Query:  STTAPPPPDSSYPPPPPPPAPSQ-----------PPNLYYPSS-QYSQVNAATTSALISTTEFFNPPTSTPNSPPPPSASQQKAEGKNMGAHERDKGVSK
        ++ APPPP  S PPP PPP PS            PP+ YY     Y Q N               PP   P++PPP      + +G N    + +KG SK
Subjt:  STTAPPPPDSSYPPPPPPPAPSQ-----------PPNLYYPSS-QYSQVNAATTSALISTTEFFNPPTSTPNSPPPPSASQQKAEGKNMGAHERDKGVSK

Query:  DPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKLRRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATP
            GRR+R   +  KH   S  P         S ++ET++E++L RKKRE EKQRQDE+HR  +K S  + + K                   E+K TP
Subjt:  DPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKKLRRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATP

Query:  FLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELLRDD
         L+ +R+ENRLKKPTTF+CKLKFRNELPD SAQ KLM+++++KD +T+YTITSLEK +KP+++VEPDLGIPLDLLDLSVYNPP V+ PLAPEDEELLRDD
Subjt:  FLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELLRDD

Query:  VLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILET---------SIIASFEACKSRPIHATNKNL-----I
           TP+KKD GI+RKERPTDKG++WLVKTQYIS ++ ES +QSLTEKQAKELREMKGG NIL            I ASFEACKSRP+HATNKNL     +
Subjt:  VLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILET---------SIIASFEACKSRPIHATNKNL-----I

Query:  LYRTYF-----VFVFLTL------------LVDP-------FQAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDN
            YF      FV                 +DP        +AI+KSY+  GSD + PEKFLAYMVPS DELSKDI+DE E++SY+WVREY WDV+  N
Subjt:  LYRTYF-----VFVFLTL------------LVDP-------FQAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDN

Query:  VDDPTTYLVSFDDSEARYVPLPTSLFLEKKGLKKG
         +DP TYLVSFD+  A Y+PLP  L L KK  ++G
Subjt:  VDDPTTYLVSFDDSEARYVPLPTSLFLEKKGLKKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTACCGGCCATATCCTCCTCAATCGTCTTTCGGTTCTGCCCCAGCTCAGAACTCCATTCCACCTCCACCATCCCAATCTGCTTCCGCCTCTTCCCAACAGCG
AGGAGGAGCTACTACTCAATATAATCAGAACTGGGGTGCTTATGCCGGCGATGCCTCTGGGCCTCCTGCTCCTTCTTCATCCTATCCCAAAATTACAACAACCAACTTCA
TCAAACTTCTAATTACCACCATCAACAGTATGGTACTCCAGAACCCAACACCCTCCACCTCCTCCTCCTCACCAGTCCTATCCTTATGCACCTCAACCACCGCCCCTCCT
CCTCCCGATTCTTCCTATCCACCGCCTCCACCCCCACCAGCGCCTTCACAACCTCCTAATCTTTACTATCCCTCTTCACAGTATTCCCAGGTCAATGCAGCCACCACCTC
CGCCCTCATCTCCACCACCGAGTTCTTCAATCCCCCCACCTCCACCCCAAATTCTCCACCACCTCCATCAGCTTCTCAGCAAAAAGCAGAGGGTAAAAACATGGGAGCAC
ACGAACGTGATAAAGGAGTTTCCAAGGATCCCTCATATGGCAGGCGTGATCGTGAAAATTCAAATCATGATAAACACCAGAAGCATTCTGGTCCCCCAATGCCTCCCAAG
AAAGCAAACGGTCCTTCAGGGAGAATGGAGACAGATGATGAGAAAAAACTGAGGAGGAAGAAGAGAGAGTTCGAAAAACAAAGGCAAGATGAGAGGCACAGACACCATCT
AAAAGAATCCCAAAACACTATACTGCAAAAGACCCAGATGTTATCTACTGGGAAGGTGCATGGATCAATTGTAGGATCCCGAATGGGGGAAAGGAAGGCCACTCCTTTTC
TTAGTGGGGAGAGAATAGAAAATAGGTTGAAGAAGCCAACCACATTTTTGTGCAAGTTGAAATTTCGCAACGAGCTTCCAGATACAAGTGCTCAGCCGAAGCTCATGTCA
CTACGGAAAGAGAAAGATCACTATACAAGATATACAATCACATCACTAGAGAAAACCTACAAACCTCAGCTTTATGTTGAGCCAGATCTTGGAATTCCTCTCGATTTGCT
TGACCTCAGTGTATACAACCCTCCTAGTGTTAGAGTGCCCCTTGCTCCTGAAGATGAGGAATTATTACGTGATGATGTATTGAAAACTCCAGTTAAAAAGGATGGTGGTA
TAAAAAGAAAAGAGCGTCCCACTGATAAAGGTGTTGCCTGGCTTGTTAAGACACAGTACATCTCTCCTCTCAGCATTGAATCCACGAAGCAGTCTTTGACTGAAAAACAG
GCAAAAGAACTGCGAGAAATGAAGGGTGGACGCAATATTCTTGAGACCTCAATAATAGCATCATTTGAGGCATGCAAGTCACGCCCTATTCACGCCACAAATAAGAATTT
AATCCTTTATCGAACATATTTTGTTTTTGTTTTTCTAACCCTGCTTGTTGATCCTTTTCAGGCGATAATGAAAAGCTATATGGCAACAGGCTCAGATCCCTCAAAACCTG
AAAAATTTCTTGCGTACATGGTTCCCTCTCCAGATGAGCTATCAAAGGATATTTACGATGAGCAAGAAGATGTCTCATATTCCTGGGTTCGTGAGTACCACTGGGATGTA
CGGGGTGATAATGTGGATGACCCCACTACATATCTCGTTTCATTTGATGATTCAGAAGCTCGTTATGTGCCACTTCCTACAAGCTTGTTCTTAGAAAAAAAAGGGCTAAA
GAAGGGAGATCCAGTGATGAGGTTGAACATTTTCCAGCACCTGCAAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTTACCGGCCATATCCTCCTCAATCGTCTTTCGGTTCTGCCCCAGCTCAGAACTCCATTCCACCTCCACCATCCCAATCTGCTTCCGCCTCTTCCCAACAGCG
AGGAGGAGCTACTACTCAATATAATCAGAACTGGGGTGCTTATGCCGGCGATGCCTCTGGGCCTCCTGCTCCTTCTTCATCCTATCCCAAAATTACAACAACCAACTTCA
TCAAACTTCTAATTACCACCATCAACAGTATGGTACTCCAGAACCCAACACCCTCCACCTCCTCCTCCTCACCAGTCCTATCCTTATGCACCTCAACCACCGCCCCTCCT
CCTCCCGATTCTTCCTATCCACCGCCTCCACCCCCACCAGCGCCTTCACAACCTCCTAATCTTTACTATCCCTCTTCACAGTATTCCCAGGTCAATGCAGCCACCACCTC
CGCCCTCATCTCCACCACCGAGTTCTTCAATCCCCCCACCTCCACCCCAAATTCTCCACCACCTCCATCAGCTTCTCAGCAAAAAGCAGAGGGTAAAAACATGGGAGCAC
ACGAACGTGATAAAGGAGTTTCCAAGGATCCCTCATATGGCAGGCGTGATCGTGAAAATTCAAATCATGATAAACACCAGAAGCATTCTGGTCCCCCAATGCCTCCCAAG
AAAGCAAACGGTCCTTCAGGGAGAATGGAGACAGATGATGAGAAAAAACTGAGGAGGAAGAAGAGAGAGTTCGAAAAACAAAGGCAAGATGAGAGGCACAGACACCATCT
AAAAGAATCCCAAAACACTATACTGCAAAAGACCCAGATGTTATCTACTGGGAAGGTGCATGGATCAATTGTAGGATCCCGAATGGGGGAAAGGAAGGCCACTCCTTTTC
TTAGTGGGGAGAGAATAGAAAATAGGTTGAAGAAGCCAACCACATTTTTGTGCAAGTTGAAATTTCGCAACGAGCTTCCAGATACAAGTGCTCAGCCGAAGCTCATGTCA
CTACGGAAAGAGAAAGATCACTATACAAGATATACAATCACATCACTAGAGAAAACCTACAAACCTCAGCTTTATGTTGAGCCAGATCTTGGAATTCCTCTCGATTTGCT
TGACCTCAGTGTATACAACCCTCCTAGTGTTAGAGTGCCCCTTGCTCCTGAAGATGAGGAATTATTACGTGATGATGTATTGAAAACTCCAGTTAAAAAGGATGGTGGTA
TAAAAAGAAAAGAGCGTCCCACTGATAAAGGTGTTGCCTGGCTTGTTAAGACACAGTACATCTCTCCTCTCAGCATTGAATCCACGAAGCAGTCTTTGACTGAAAAACAG
GCAAAAGAACTGCGAGAAATGAAGGGTGGACGCAATATTCTTGAGACCTCAATAATAGCATCATTTGAGGCATGCAAGTCACGCCCTATTCACGCCACAAATAAGAATTT
AATCCTTTATCGAACATATTTTGTTTTTGTTTTTCTAACCCTGCTTGTTGATCCTTTTCAGGCGATAATGAAAAGCTATATGGCAACAGGCTCAGATCCCTCAAAACCTG
AAAAATTTCTTGCGTACATGGTTCCCTCTCCAGATGAGCTATCAAAGGATATTTACGATGAGCAAGAAGATGTCTCATATTCCTGGGTTCGTGAGTACCACTGGGATGTA
CGGGGTGATAATGTGGATGACCCCACTACATATCTCGTTTCATTTGATGATTCAGAAGCTCGTTATGTGCCACTTCCTACAAGCTTGTTCTTAGAAAAAAAAGGGCTAAA
GAAGGGAGATCCAGTGATGAGGTTGAACATTTTCCAGCACCTGCAAGAGTGACCGTAAGGAGAAGACCAACTGTAGCTACTTTGGAAGTGAAGGATCCTGGGATTTACTC
GAATTCGAAAAGAGGATCAGATATTGAAGATGGTATCGGAAGATTGCATAAACATGATAGACACCACCAGACATGGATCAATACAGTGGAGCTGAAGACGAGATGTCTGA
TTGATTAATAACATTTTGGTACAACCAATTAATTTGGCTTCCCATGGATTATCTTCCAAATTCAAACGCAGCTGGAGTCGGCCCAATTTTCCCTTTTTTACCACCAGATG
TTGATGGTGCTTTATTGAGTGTGAACGTTAATGATCTATTGCTACGCTAACTTTAGCACTTGTTTTCATTATTAAATTTCTTAATTTAATCTGTATAGTTTCTTACCGAC
ACGGCAGGAAAAATGAAATCGGATAGAAGACTCTACATTAGATACTCCCT
Protein sequenceShow/hide protein sequence
MASYRPYPPQSSFGSAPAQNSIPPPPSQSASASSQQRGGATTQYNQNWGAYAGDASGPPAPSSSYPKITTTNFIKLLITTINSMVLQNPTPSTSSSSPVLSLCTSTTAPP
PPDSSYPPPPPPPAPSQPPNLYYPSSQYSQVNAATTSALISTTEFFNPPTSTPNSPPPPSASQQKAEGKNMGAHERDKGVSKDPSYGRRDRENSNHDKHQKHSGPPMPPK
KANGPSGRMETDDEKKLRRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMS
LRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESTKQSLTEKQ
AKELREMKGGRNILETSIIASFEACKSRPIHATNKNLILYRTYFVFVFLTLLVDPFQAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDV
RGDNVDDPTTYLVSFDDSEARYVPLPTSLFLEKKGLKKGDPVMRLNIFQHLQE