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IVF0009181 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009181
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr11:16613317..16613484
RNA-Seq ExpressionIVF0009181
SyntenyIVF0009181
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038851.1 retrotransposon protein [Cucumis melo var. makuwa]2.54e-2992.73Show/hide
Query:  MTYCDNVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCD+VEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLA SMFT+WQ RNA
Subjt:  MTYCDNVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
KAA0058871.1 retrotransposon protein [Cucumis melo var. makuwa]5.32e-2992.73Show/hide
Query:  MTYCDNVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYC++V+DEDEGDSTY TTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCDNVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
KAA0062284.1 retrotransposon protein [Cucumis melo var. makuwa]4.57e-3094.55Show/hide
Query:  MTYCDNVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCD+++DEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCDNVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
TYK04228.1 retrotransposon protein [Cucumis melo var. makuwa]1.79e-2992.73Show/hide
Query:  MTYCDNVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCD V+D+DEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRN 
Subjt:  MTYCDNVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
TYK10914.1 retrotransposon protein [Cucumis melo var. makuwa]6.69e-29100Show/hide
Query:  MTYCDNVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCDNVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCDNVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
TrEMBL top hitse value%identityAlignment
A0A5A7TUU4 Retrotransposon protein4.4e-2296.36Show/hide
Query:  MTYCDNVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCD+VEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT+WQLRNA
Subjt:  MTYCDNVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
A0A5A7UG16 Retrotransposon protein2.0e-2298.18Show/hide
Query:  MTYCDNVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCD+VEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCDNVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
A0A5A7V4C6 Retrotransposon protein4.4e-2296.36Show/hide
Query:  MTYCDNVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCD+VED+DEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCDNVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
A0A5A7V4Q8 Retrotransposon protein5.8e-2294.55Show/hide
Query:  MTYCDNVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCD+++DEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCDNVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
A0A5D3CIB6 Retrotransposon protein5.2e-23100Show/hide
Query:  MTYCDNVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCDNVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCDNVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCGACAACGTTGAGGACGAGGACGAGGGGGACTCCACATACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAGTTGCGTAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCGACAACGTTGAGGACGAGGACGAGGGGGACTCCACATACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAGTTGCGTAACGCTTAG
Protein sequenceShow/hide protein sequence
MTYCDNVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA