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IVF0009186 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009186
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr07:5652787..5653173
RNA-Seq ExpressionIVF0009186
SyntenyIVF0009186
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33753.1 hypothetical protein [Cucumis melo subsp. melo]2.11e-86100Show/hide
Query:  MFNDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQL
        MFNDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQL
Subjt:  MFNDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQL

Query:  QDIPELRSRDRAKLMQILFRSVEAIEGF
        QDIPELRSRDRAKLMQILFRSVEAIEGF
Subjt:  QDIPELRSRDRAKLMQILFRSVEAIEGF

KAA0031678.1 retrotransposon protein [Cucumis melo var. makuwa]2.15e-6481.25Show/hide
Query:  MFNDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQL
        MFNDGVPLGDSH+QDI T+YSQGVHM  +E+FGIRA QASERRN SSGSKRK+GS+HYEMVEVI SA EFGNDQLK   DW K+K +TEVEL  EVVKQL
Subjt:  MFNDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQL

Query:  QDIPELRSRDRAKLMQILFRSVEAIEGF
        QDIP+LRS+DRAKLMQILFRSVEAIEGF
Subjt:  QDIPELRSRDRAKLMQILFRSVEAIEGF

KAA0033290.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]4.76e-6382.03Show/hide
Query:  MFNDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQL
        MFN  VPL DSHDQDIP MYSQGVHM  +EMFGIRA QASER+NCSSGSKRKQGS+HYE VEVIKSA+EFGNDQLKA  +W K+K +TEVEL AEV+KQL
Subjt:  MFNDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQL

Query:  QDIPELRSRDRAKLMQILFRSVEAIEGF
        QDIPEL+SRDRAKL+QILFRSVEAIEGF
Subjt:  QDIPELRSRDRAKLMQILFRSVEAIEGF

KAA0042340.1 retrotransposon protein [Cucumis melo var. makuwa]2.72e-6075.78Show/hide
Query:  MFNDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQL
        MFNDGVPLGDSH +DIPTMYSQGV M  +EMFG RA QASERRNCSS SKRKQGS+HYE VEVI+SAM+FGNDQLKA  DW K+K + +VEL A VVKQL
Subjt:  MFNDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQL

Query:  QDIPELRSRDRAKLMQILFRSVEAIEGF
        QDIP+L++RDR K++QILF SVE IEGF
Subjt:  QDIPELRSRDRAKLMQILFRSVEAIEGF

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]2.21e-6378.91Show/hide
Query:  MFNDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQL
        MFND +PLGDSHD+DIPTMYSQGVHM  +EMFGIRA QASERRNCSS SKRK+GSE YE VEVI+S MEFGN+QLKA  DW K+K + EVE+ A+VVKQL
Subjt:  MFNDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQL

Query:  QDIPELRSRDRAKLMQILFRSVEAIEGF
        QDIP+LRS+DRAKLMQILFRS+EAIEGF
Subjt:  QDIPELRSRDRAKLMQILFRSVEAIEGF

TrEMBL top hitse value%identityAlignment
A0A5A7SQU2 Putative nuclease HARBI11.4e-5082.03Show/hide
Query:  MFNDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQL
        MFN  VPL DSHDQDIP MYSQGVHM  +EMFGIRA QASER+NCSSGSKRKQGS+HYE VEVIKSA+EFGNDQLKA  +W K+K +TEVEL AEV+KQL
Subjt:  MFNDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQL

Query:  QDIPELRSRDRAKLMQILFRSVEAIEGF
        QDIPEL+SRDRAKL+QILFRSVEAIEGF
Subjt:  QDIPELRSRDRAKLMQILFRSVEAIEGF

A0A5A7U0H7 Retrotransposon protein3.4e-4978.91Show/hide
Query:  MFNDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQL
        MFND +PLGDSHD+DIPTMYSQGVHM  +EMFGIRA QASERRNCSS SKRK+GSE YE VEVI+S MEFGN+QLKA  DW K+K + EVE+ A+VVKQL
Subjt:  MFNDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQL

Query:  QDIPELRSRDRAKLMQILFRSVEAIEGF
        QDIP+LRS+DRAKLMQILFRS+EAIEGF
Subjt:  QDIPELRSRDRAKLMQILFRSVEAIEGF

A0A5A7UDQ3 Retrotransposon protein7.5e-65100Show/hide
Query:  MFNDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQL
        MFNDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQL
Subjt:  MFNDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQL

Query:  QDIPELRSRDRAKLMQILFRSVEAIEGF
        QDIPELRSRDRAKLMQILFRSVEAIEGF
Subjt:  QDIPELRSRDRAKLMQILFRSVEAIEGF

A0A5D3BZU3 Retrotransposon protein1.5e-4981.25Show/hide
Query:  MFNDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQL
        MFNDGVPLGDSH+QDI T+YSQGVHM  +E+FGIRA QASERRN SSGSKRK+GS+HYEMVEVI SA EFGNDQLK   DW K+K +TEVEL  EVVKQL
Subjt:  MFNDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQL

Query:  QDIPELRSRDRAKLMQILFRSVEAIEGF
        QDIP+LRS+DRAKLMQILFRSVEAIEGF
Subjt:  QDIPELRSRDRAKLMQILFRSVEAIEGF

E5GBB1 Uncharacterized protein7.5e-65100Show/hide
Query:  MFNDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQL
        MFNDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQL
Subjt:  MFNDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQL

Query:  QDIPELRSRDRAKLMQILFRSVEAIEGF
        QDIPELRSRDRAKLMQILFRSVEAIEGF
Subjt:  QDIPELRSRDRAKLMQILFRSVEAIEGF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAATGATGGTGTTCCCCTCGGTGATTCACATGATCAAGACATCCCGACGATGTATAGCCAAGGAGTGCATATGTTATCAAATGAGATGTTTGGAATACGTGCAGA
TCAAGCAAGTGAGAGAAGAAATTGTTCAAGTGGAAGTAAGAGGAAACAAGGTAGCGAACATTATGAAATGGTAGAGGTGATCAAGAGTGCAATGGAATTTGGAAATGATC
AATTAAAAGCATTTGAAGATTGGTCAAAAGATAAGCATTCAACGGAGGTCGAATTGCATGCTGAAGTTGTGAAACAGCTGCAAGATATTCCTGAACTACGAAGCCGAGAT
AGGGCAAAGCTTATGCAAATCCTATTCCGTAGTGTGGAGGCCATTGAGGGATTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTAATGATGGTGTTCCCCTCGGTGATTCACATGATCAAGACATCCCGACGATGTATAGCCAAGGAGTGCATATGTTATCAAATGAGATGTTTGGAATACGTGCAGA
TCAAGCAAGTGAGAGAAGAAATTGTTCAAGTGGAAGTAAGAGGAAACAAGGTAGCGAACATTATGAAATGGTAGAGGTGATCAAGAGTGCAATGGAATTTGGAAATGATC
AATTAAAAGCATTTGAAGATTGGTCAAAAGATAAGCATTCAACGGAGGTCGAATTGCATGCTGAAGTTGTGAAACAGCTGCAAGATATTCCTGAACTACGAAGCCGAGAT
AGGGCAAAGCTTATGCAAATCCTATTCCGTAGTGTGGAGGCCATTGAGGGATTCTAG
Protein sequenceShow/hide protein sequence
MFNDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQLQDIPELRSRD
RAKLMQILFRSVEAIEGF