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IVF0009220 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009220
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1
Genome locationchr04:28643277..28644620
RNA-Seq ExpressionIVF0009220
SyntenyIVF0009220
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003824 - catalytic activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043726.1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 [Cucumis melo var. makuwa]3.75e-55100Show/hide
Query:  MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEEL
        MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEEL
Subjt:  MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEEL

Query:  LKRYSGEK
        LKRYSGEK
Subjt:  LKRYSGEK
XP_011652096.2 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1 [Cucumis sativus]1.14e-5398.15Show/hide
Query:  MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEEL
        MLAENLVETYKPSQVNSTNEPHN HVQEIDESKAVEPTELNVEHESDSV+FDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEEL
Subjt:  MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEEL

Query:  LKRYSGEK
        LKRYSGEK
Subjt:  LKRYSGEK
XP_016899687.1 PREDICTED: LOW QUALITY PROTEIN: protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 [Cucumis melo]3.75e-55100Show/hide
Query:  MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEEL
        MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEEL
Subjt:  MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEEL

Query:  LKRYSGEK
        LKRYSGEK
Subjt:  LKRYSGEK
XP_031739104.1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X2 [Cucumis sativus]1.14e-5398.15Show/hide
Query:  MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEEL
        MLAENLVETYKPSQVNSTNEPHN HVQEIDESKAVEPTELNVEHESDSV+FDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEEL
Subjt:  MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEEL

Query:  LKRYSGEK
        LKRYSGEK
Subjt:  LKRYSGEK
XP_038904045.1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1 [Benincasa hispida]1.70e-4992.59Show/hide
Query:  MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEEL
        MLAENLVETYKPSQVNST+EPHN H QEIDES+AVEPTELNVEHESDSV+FDEEFDV SEDESEDNEQTIDEDEALIT+EERQEELEALQNEVDLPLEEL
Subjt:  MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEEL

Query:  LKRYSGEK
        LKRY GEK
Subjt:  LKRYSGEK
TrEMBL top hitse value%identityAlignment
A0A0A0LBB6 Uncharacterized protein6.0e-4698.15Show/hide
Query:  MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEEL
        MLAENLVETYKPSQVNSTNEPHN HVQEIDESKAVEPTELNVEHESDSV+FDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEEL
Subjt:  MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEEL

Query:  LKRYSGEK
        LKRYSGEK
Subjt:  LKRYSGEK
A0A1S4DUM1 LOW QUALITY PROTEIN: protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 13.2e-47100Show/hide
Query:  MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEEL
        MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEEL
Subjt:  MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEEL

Query:  LKRYSGEK
        LKRYSGEK
Subjt:  LKRYSGEK
A0A5A7TNS3 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 13.2e-47100Show/hide
Query:  MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEEL
        MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEEL
Subjt:  MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEEL

Query:  LKRYSGEK
        LKRYSGEK
Subjt:  LKRYSGEK
A0A6J1FNW1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 11.4e-3987.04Show/hide
Query:  MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEEL
        MLAENLVETYKPSQV+ST+EPHN H+QE+DE+KAVE TELNVEHE+DSV+FDEEFDV S+DESEDNEQTIDEDEALIT+EERQEELEALQNEVDLPLEEL
Subjt:  MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEEL

Query:  LKRYSGEK
        LKRY+ EK
Subjt:  LKRYSGEK
A0A6J1I6A5 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 17.1e-3986.11Show/hide
Query:  MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEEL
        MLAENLVETYKPS V+ST+EPHN H+QE+DE+KAVE TELNVEHE+DSV+FDEEFDV S+DESEDNEQTIDEDEALIT+EERQEELEALQNEVDLPLEEL
Subjt:  MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEEL

Query:  LKRYSGEK
        LKRY+ EK
Subjt:  LKRYSGEK
SwissProt top hitse value%identityAlignment
Q7X9V2 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 14.3e-1757.41Show/hide
Query:  MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVE-PTELNVEH--ESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPL
        MLAENLVE YK  Q N+ ++P      + DE +A + P E+N     ES S E DE++D+ SEDE+ED+E TI+EDE   TK ERQEELEALQNEVDLP+
Subjt:  MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVE-PTELNVEH--ESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPL

Query:  EELLKRYS
        EELL+RY+
Subjt:  EELLKRYS
Arabidopsis top hitse value%identityAlignment
AT3G12810.1 SNF2 domain-containing protein / helicase domain-containing protein3.1e-1857.41Show/hide
Query:  MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVE-PTELNVEH--ESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPL
        MLAENLVE YK  Q N+ ++P      + DE +A + P E+N     ES S E DE++D+ SEDE+ED+E TI+EDE   TK ERQEELEALQNEVDLP+
Subjt:  MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVE-PTELNVEH--ESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPL

Query:  EELLKRYS
        EELL+RY+
Subjt:  EELLKRYS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGCAGAAAATCTTGTGGAAACTTATAAACCATCGCAGGTGAATTCTACAAACGAGCCACACAATTTTCATGTCCAAGAGATTGACGAAAGCAAGGCTGTTGAACC
TACAGAGTTAAATGTTGAACACGAGTCAGATTCTGTGGAGTTCGATGAAGAATTCGATGTACACTCTGAAGATGAATCTGAAGATAATGAGCAGACCATAGATGAAGATG
AAGCTTTAATAACTAAAGAAGAAAGGCAAGAAGAATTGGAAGCTTTACAAAATGAAGTGGATCTTCCTCTTGAAGAGCTTCTTAAAAGATATAGTGGAGAGAAAGGTGCG
TGGTCAACCATTATCATTTTCTTATCTTTTAATCATGCATTTGACAGGCCAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGGCAGAAAATCTTGTGGAAACTTATAAACCATCGCAGGTGAATTCTACAAACGAGCCACACAATTTTCATGTCCAAGAGATTGACGAAAGCAAGGCTGTTGAACC
TACAGAGTTAAATGTTGAACACGAGTCAGATTCTGTGGAGTTCGATGAAGAATTCGATGTACACTCTGAAGATGAATCTGAAGATAATGAGCAGACCATAGATGAAGATG
AAGCTTTAATAACTAAAGAAGAAAGGCAAGAAGAATTGGAAGCTTTACAAAATGAAGTGGATCTTCCTCTTGAAGAGCTTCTTAAAAGATATAGTGGAGAGAAAGGTGCG
TGGTCAACCATTATCATTTTCTTATCTTTTAATCATGCATTTGACAGGCCAGGTTGA
Protein sequenceShow/hide protein sequence
MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYSGEKGA
WSTIIIFLSFNHAFDRPG