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IVF0009231 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009231
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr11:1944323..1944490
RNA-Seq ExpressionIVF0009231
SyntenyIVF0009231
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045643.1 retrotransposon protein [Cucumis melo var. makuwa]5.84e-30100Show/hide
Query:  MTYCDDVDDEDEGDSMYVTTTASEDIQYIETTNEWSQWRDDLAESMFTVWQLRNA
        MTYCDDVDDEDEGDSMYVTTTASEDIQYIETTNEWSQWRDDLAESMFTVWQLRNA
Subjt:  MTYCDDVDDEDEGDSMYVTTTASEDIQYIETTNEWSQWRDDLAESMFTVWQLRNA
KAA0058871.1 retrotransposon protein [Cucumis melo var. makuwa]7.56e-2992.73Show/hide
Query:  MTYCDDVDDEDEGDSMYVTTTASEDIQYIETTNEWSQWRDDLAESMFTVWQLRNA
        MTYC+DVDDEDEGDS Y TTTASEDIQYIETTNEWSQWRDDLAESMFT WQLRNA
Subjt:  MTYCDDVDDEDEGDSMYVTTTASEDIQYIETTNEWSQWRDDLAESMFTVWQLRNA
KAA0062284.1 retrotransposon protein [Cucumis melo var. makuwa]9.21e-3092.73Show/hide
Query:  MTYCDDVDDEDEGDSMYVTTTASEDIQYIETTNEWSQWRDDLAESMFTVWQLRNA
        MTYCDD+DDEDEGDS Y TTTASEDIQYIETTNEWSQWRDDLAESMFT WQLRNA
Subjt:  MTYCDDVDDEDEGDSMYVTTTASEDIQYIETTNEWSQWRDDLAESMFTVWQLRNA
TYK04228.1 retrotransposon protein [Cucumis melo var. makuwa]1.04e-2889.09Show/hide
Query:  MTYCDDVDDEDEGDSMYVTTTASEDIQYIETTNEWSQWRDDLAESMFTVWQLRNA
        MTYCD+VDD+DEGDS Y TTTASEDIQYIETTNEWSQWRDDLAESMFT WQLRN 
Subjt:  MTYCDDVDDEDEGDSMYVTTTASEDIQYIETTNEWSQWRDDLAESMFTVWQLRNA
TYK05336.1 retrotransposon protein [Cucumis melo var. makuwa]1.07e-2890.91Show/hide
Query:  MTYCDDVDDEDEGDSMYVTTTASEDIQYIETTNEWSQWRDDLAESMFTVWQLRNA
        MTYC+DVDDEDEGDS Y TTTASEDIQYIETTNEWSQWRDDLAESMFT WQLRN+
Subjt:  MTYCDDVDDEDEGDSMYVTTTASEDIQYIETTNEWSQWRDDLAESMFTVWQLRNA
TrEMBL top hitse value%identityAlignment
A0A5A7SMB5 Retrotransposon protein8.3e-2192.73Show/hide
Query:  MTYCDDVDDEDEGDSMYVTTTASEDIQYIETTNEWSQWRDDLAESMFTVWQLRNA
        MTYCDDVDDEDEGDS Y TTTASEDIQYIETTNEWSQW DDLAESMFT WQLRNA
Subjt:  MTYCDDVDDEDEGDSMYVTTTASEDIQYIETTNEWSQWRDDLAESMFTVWQLRNA
A0A5A7TQ24 Retrotransposon protein3.1e-23100Show/hide
Query:  MTYCDDVDDEDEGDSMYVTTTASEDIQYIETTNEWSQWRDDLAESMFTVWQLRNA
        MTYCDDVDDEDEGDSMYVTTTASEDIQYIETTNEWSQWRDDLAESMFTVWQLRNA
Subjt:  MTYCDDVDDEDEGDSMYVTTTASEDIQYIETTNEWSQWRDDLAESMFTVWQLRNA
A0A5A7TUU4 Retrotransposon protein8.3e-2192.73Show/hide
Query:  MTYCDDVDDEDEGDSMYVTTTASEDIQYIETTNEWSQWRDDLAESMFTVWQLRNA
        MTYCDDV+DEDEGDS Y TTTASEDIQYIETTNEWSQWRDDLAESMFT WQLRNA
Subjt:  MTYCDDVDDEDEGDSMYVTTTASEDIQYIETTNEWSQWRDDLAESMFTVWQLRNA
A0A5A7UG16 Retrotransposon protein6.4e-2192.73Show/hide
Query:  MTYCDDVDDEDEGDSMYVTTTASEDIQYIETTNEWSQWRDDLAESMFTVWQLRNA
        MTYCDDV+DEDEGDS Y TTTASEDIQYIETTNEWSQWRDDLAESMFT WQLRNA
Subjt:  MTYCDDVDDEDEGDSMYVTTTASEDIQYIETTNEWSQWRDDLAESMFTVWQLRNA
A0A5A7V4Q8 Retrotransposon protein2.9e-2192.73Show/hide
Query:  MTYCDDVDDEDEGDSMYVTTTASEDIQYIETTNEWSQWRDDLAESMFTVWQLRNA
        MTYCDD+DDEDEGDS Y TTTASEDIQYIETTNEWSQWRDDLAESMFT WQLRNA
Subjt:  MTYCDDVDDEDEGDSMYVTTTASEDIQYIETTNEWSQWRDDLAESMFTVWQLRNA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCGACGACGTTGACGACGAGGACGAGGGTGACTCCATGTACGTGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGACCTAGCCGAATCGATGTTCACCGTATGGCAGTTGCGTAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCGACGACGTTGACGACGAGGACGAGGGTGACTCCATGTACGTGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGACCTAGCCGAATCGATGTTCACCGTATGGCAGTTGCGTAACGCTTAG
Protein sequenceShow/hide protein sequence
MTYCDDVDDEDEGDSMYVTTTASEDIQYIETTNEWSQWRDDLAESMFTVWQLRNA