; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0009262 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009262
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionSWIB/MDM2 domain;Plus-3;GYF
Genome locationchr06:17542846..17551356
RNA-Seq ExpressionIVF0009262
SyntenyIVF0009262
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650192.1 hypothetical protein Csa_010989 [Cucumis sativus]4.86e-1397.3Show/hide
Query:  EECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH
        EECEDLHQRMRNGLL KPTVVELYEKAKSLHEDITKH
Subjt:  EECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH
XP_004133728.1 uncharacterized protein At5g08430 [Cucumis sativus]5.14e-1397.3Show/hide
Query:  EECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH
        EECEDLHQRMRNGLL KPTVVELYEKAKSLHEDITKH
Subjt:  EECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH
XP_008452231.1 PREDICTED: uncharacterized protein At5g08430 isoform X1 [Cucumis melo]4.39e-14100Show/hide
Query:  EECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH
        EECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH
Subjt:  EECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH
XP_008452232.1 PREDICTED: uncharacterized protein At5g08430 isoform X2 [Cucumis melo]4.15e-14100Show/hide
Query:  EECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH
        EECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH
Subjt:  EECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH
XP_023539109.1 uncharacterized protein At5g08430-like [Cucurbita pepo subsp. pepo]1.77e-1086.49Show/hide
Query:  EECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH
        EECEDL QRM+NGLL  PTV+ELYEKAKSLHEDITKH
Subjt:  EECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH
TrEMBL top hitse value%identityAlignment
A0A0A0L824 Uncharacterized protein3.0e-4866.48Show/hide
Query:  MYSSMYIIVLLLTFHSPLELPWLTSQGRRIRMKEDEEKEEEKEKWMTVLN---KVGSACLGLAAAIWLVNLGFATTLKEVGWMNLTTIHQVLITMPTYSC
        MYSS+Y+IVLLLTF S LELPWLTSQGRR+RMKE EE EEEKEKW+ + N   K GSA LGLAAAIWL+ +  + +         T  H     MPTYSC
Subjt:  MYSSMYIIVLLLTFHSPLELPWLTSQGRRIRMKEDEEKEEEKEKWMTVLN---KVGSACLGLAAAIWLVNLGFATTLKEVGWMNLTTIHQVLITMPTYSC

Query:  DPGNWVASQNQTILLKLHWGISLQGEISSFLSFCLQKKSTEECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKHVV
        DP NWVASQNQTILLKLHW      + S+  +F L     EECEDLHQRMRNGLL KPTVVELYEKAKSLHEDITKHVV
Subjt:  DPGNWVASQNQTILLKLHWGISLQGEISSFLSFCLQKKSTEECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKHVV
A0A1S3BSR8 uncharacterized protein At5g08430 isoform X17.8e-12100Show/hide
Query:  EECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH
        EECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH
Subjt:  EECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH
A0A1S3BTE6 uncharacterized protein At5g08430 isoform X27.8e-12100Show/hide
Query:  EECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH
        EECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH
Subjt:  EECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH
A0A5C7HAW7 Plus3 domain-containing protein3.1e-0879.49Show/hide
Query:  STEECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH
        S EECEDLHQR++NGLL +PTVVEL +KA+SLHEDITKH
Subjt:  STEECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH
A0A6J1JAH4 uncharacterized protein At5g08430-like2.3e-0883.78Show/hide
Query:  EECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH
        +ECEDL QRM+NGLL  PTV+ELYEKAKSLHEDITKH
Subjt:  EECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH
SwissProt top hitse value%identityAlignment
Q9FT92 Uncharacterized protein At5g084307.0e-1074.36Show/hide
Query:  STEECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH
        S EECEDLHQR++NGLL KPT+VE+ EKAK LH+D TKH
Subjt:  STEECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH
Arabidopsis top hitse value%identityAlignment
AT5G08430.1 SWIB/MDM2 domain;Plus-3;GYF5.0e-1174.36Show/hide
Query:  STEECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH
        S EECEDLHQR++NGLL KPT+VE+ EKAK LH+D TKH
Subjt:  STEECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH
AT5G23480.1 SWIB/MDM2 domain;Plus-3;GYF1.7e-0662.86Show/hide
Query:  STEECEDLHQRMRNGLLGKPTVVELYEKAKSLHED
        S EECE+LHQR+ NG   + TVV++ EKA+SLHED
Subjt:  STEECEDLHQRMRNGLLGKPTVVELYEKAKSLHED
AT5G63700.1 zinc ion binding;DNA binding2.8e-0662.16Show/hide
Query:  EECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH
        EE +DL Q++ NGLL + TVVE+ +KAK+LH DITKH
Subjt:  EECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACTCCAGTATGTACATAATCGTGTTGCTGCTCACTTTCCATAGTCCATTAGAGCTCCCGTGGTTAACTTCTCAGGGAAGAAGAATCAGGATGAAGGAAGATGAGGA
AAAAGAGGAAGAGAAAGAAAAATGGATGACGGTACTCAATAAAGTTGGTTCGGCCTGCCTAGGGCTTGCGGCTGCAATATGGCTGGTTAACCTAGGGTTTGCGACAACAC
TAAAGGAGGTAGGATGGATGAATTTGACGACAATTCATCAGGTATTGATCACCATGCCTACATATAGTTGTGATCCGGGGAATTGGGTGGCATCGCAGAATCAAACAATT
CTACTAAAGTTGCATTGGGGGATTTCTCTGCAGGGAGAAATTTCCTCCTTTTTATCGTTCTGCTTGCAAAAGAAGTCTACTGAAGAATGTGAAGATTTGCACCAGCGAAT
GAGAAATGGCCTGCTCGGAAAACCCACGGTGGTGGAGCTTTACGAGAAGGCAAAAAGTCTGCATGAGGACATCACAAAACATGTAGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTACTCCAGTATGTACATAATCGTGTTGCTGCTCACTTTCCATAGTCCATTAGAGCTCCCGTGGTTAACTTCTCAGGGAAGAAGAATCAGGATGAAGGAAGATGAGGA
AAAAGAGGAAGAGAAAGAAAAATGGATGACGGTACTCAATAAAGTTGGTTCGGCCTGCCTAGGGCTTGCGGCTGCAATATGGCTGGTTAACCTAGGGTTTGCGACAACAC
TAAAGGAGGTAGGATGGATGAATTTGACGACAATTCATCAGGTATTGATCACCATGCCTACATATAGTTGTGATCCGGGGAATTGGGTGGCATCGCAGAATCAAACAATT
CTACTAAAGTTGCATTGGGGGATTTCTCTGCAGGGAGAAATTTCCTCCTTTTTATCGTTCTGCTTGCAAAAGAAGTCTACTGAAGAATGTGAAGATTTGCACCAGCGAAT
GAGAAATGGCCTGCTCGGAAAACCCACGGTGGTGGAGCTTTACGAGAAGGCAAAAAGTCTGCATGAGGACATCACAAAACATGTAGTGTAA
Protein sequenceShow/hide protein sequence
MYSSMYIIVLLLTFHSPLELPWLTSQGRRIRMKEDEEKEEEKEKWMTVLNKVGSACLGLAAAIWLVNLGFATTLKEVGWMNLTTIHQVLITMPTYSCDPGNWVASQNQTI
LLKLHWGISLQGEISSFLSFCLQKKSTEECEDLHQRMRNGLLGKPTVVELYEKAKSLHEDITKHVV