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IVF0009295 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009295
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionHistone H2B.3-like
Genome locationchr10:19221191..19221343
RNA-Seq ExpressionIVF0009295
SyntenyIVF0009295
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038170.1 gag-protease polyprotein [Cucumis melo var. makuwa]1.32e-0654.9Show/hide
Query:  MLPCRGARRGGQGGREKA--RNQLDEQPAERVVNPNTPTTHVDLTAIQIQL
        +LP RGARRGG+GGR +   R Q + QP  +  NP TP THVDLTA++  L
Subjt:  MLPCRGARRGGQGGREKA--RNQLDEQPAERVVNPNTPTTHVDLTAIQIQL

KAA0045476.1 histone H2B.3-like [Cucumis melo var. makuwa]3.22e-0756.52Show/hide
Query:  MLPCRGARRGGQGGREKARNQLDEQPAERVVNPNTPTTHVDLTAIQ
        MLP RGARRGG GGR   R Q +EQPA ++ NP  P T  DL A++
Subjt:  MLPCRGARRGGQGGREKARNQLDEQPAERVVNPNTPTTHVDLTAIQ

KAA0062300.1 gag protease polyprotein [Cucumis melo var. makuwa]3.00e-0657.45Show/hide
Query:  MLPCRGARRGG-QGGREKARNQLDEQPAERVVNPNTPTTHVDLTAIQ
        M P R ARRGG +GGR   R Q +EQPA +V NP TP T VDL A++
Subjt:  MLPCRGARRGG-QGGREKARNQLDEQPAERVVNPNTPTTHVDLTAIQ

KAA0067790.1 uncharacterized protein E6C27_scaffold624G00150 [Cucumis melo var. makuwa]4.89e-0656.52Show/hide
Query:  MLPCRGARRGGQGGREKARNQLDEQPAERVVNPNTPTTHVDLTAIQ
        MLP RGARRGG+GGR     Q +EQPA +  N  T  T VDLTA++
Subjt:  MLPCRGARRGGQGGREKARNQLDEQPAERVVNPNTPTTHVDLTAIQ

XP_011655042.1 uncharacterized protein LOC101209878 [Cucumis sativus]6.55e-0760.47Show/hide
Query:  ARRGGQGGREKARNQLDEQPAERVVNPNTPTTHVDLTAIQIQL
        A RGGQGGRE   NQ+DEQPAE+V NP  P +  DLTA+  +L
Subjt:  ARRGGQGGREKARNQLDEQPAERVVNPNTPTTHVDLTAIQIQL

TrEMBL top hitse value%identityAlignment
A0A5A7TTM9 Histone H2B.3-like3.8e-0456.52Show/hide
Query:  MLPCRGARRGGQGGREKARNQLDEQPAERVVNPNTPTTHVDLTAIQ
        MLP RGARRGG GGR   R Q +EQPA ++ NP  P T  DL A++
Subjt:  MLPCRGARRGGQGGREKARNQLDEQPAERVVNPNTPTTHVDLTAIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCCATGTAGAGGTGCTCGAAGGGGTGGTCAAGGAGGCAGAGAGAAAGCGCGTAATCAACTTGATGAACAACCTGCTGAACGAGTTGTCAACCCCAATACACCCAC
CACCCACGTAGACCTTACTGCCATTCAGATCCAGCTAGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGCCATGTAGAGGTGCTCGAAGGGGTGGTCAAGGAGGCAGAGAGAAAGCGCGTAATCAACTTGATGAACAACCTGCTGAACGAGTTGTCAACCCCAATACACCCAC
CACCCACGTAGACCTTACTGCCATTCAGATCCAGCTAGTGTAG
Protein sequenceShow/hide protein sequence
MLPCRGARRGGQGGREKARNQLDEQPAERVVNPNTPTTHVDLTAIQIQLV