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IVF0009372 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009372
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr04:14418449..14418880
RNA-Seq ExpressionIVF0009372
SyntenyIVF0009372
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026125.1 hypothetical protein E6C27_scaffold19G00740 [Cucumis melo var. makuwa]2.48e-4855.94Show/hide
Query:  MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSFVRIHAVPLETTKFETRTKSVKFD
        ME LI+ K+KVRYNY GFVPAS++I+DDQG  +++  VPPP  RWFVER V  HGSFK+KA +EFDEHNP A+ Y++    A+P  TTK       +  D
Subjt:  MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSFVRIHAVPLETTKFETRTKSVKFD

Query:  WPSDLDPPQTKKDSSSDLEYDPFDQQICDRRKEKGKAIMSINE
          S  +  Q KK++SS+ EYDPFDQQ+C++RKEKGKAI+ IN+
Subjt:  WPSDLDPPQTKKDSSSDLEYDPFDQQICDRRKEKGKAIMSINE

KAA0040385.1 hypothetical protein E6C27_scaffold3125G00090 [Cucumis melo var. makuwa]6.60e-4752.45Show/hide
Query:  MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSFVRIHAVPLETTKFETRTKSVKFD
        M+ LI+ K+KVRYNY GFVPAS++I+DDQG  +++  VPPP+ RWFVER+V  HGSFK+K  D+FDEHNP A+ Y++    A P ETTK       +  D
Subjt:  MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSFVRIHAVPLETTKFETRTKSVKFD

Query:  WPSDLDPPQTKKDSSSDLEYDPFDQQICDRRKEKGKAIMSINE
          S  +P Q KK++SS+ EYD FDQQ+ ++RKEK K ++ IN+
Subjt:  WPSDLDPPQTKKDSSSDLEYDPFDQQICDRRKEKGKAIMSINE

KAA0050754.1 hypothetical protein E6C27_scaffold404G00010 [Cucumis melo var. makuwa]3.96e-100100Show/hide
Query:  MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSFVRIHAVPLETTKFETRTKSVKFD
        MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSFVRIHAVPLETTKFETRTKSVKFD
Subjt:  MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSFVRIHAVPLETTKFETRTKSVKFD

Query:  WPSDLDPPQTKKDSSSDLEYDPFDQQICDRRKEKGKAIMSINE
        WPSDLDPPQTKKDSSSDLEYDPFDQQICDRRKEKGKAIMSINE
Subjt:  WPSDLDPPQTKKDSSSDLEYDPFDQQICDRRKEKGKAIMSINE

TYJ97061.1 hypothetical protein E5676_scaffold506G001290 [Cucumis melo var. makuwa]6.13e-5059.44Show/hide
Query:  MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSFVRIHAVPLETTKFETRTKSVKFD
        MENLI+ +V VRYNY+GFVPAS L  DDQG E+++YIVPP DGRWFVERNV+FHGSF+T+A +EFDEHN +A+A+SF+R H VP    K +    + + D
Subjt:  MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSFVRIHAVPLETTKFETRTKSVKFD

Query:  WPSDLDPPQTKKDSSSDLEYDPFDQQICDRRKEKGKAIMSINE
          ++ D    KKDSSSD + DPFDQ   ++ KEKGKA+MSINE
Subjt:  WPSDLDPPQTKKDSSSDLEYDPFDQQICDRRKEKGKAIMSINE

TYK20448.1 uncharacterized protein E5676_scaffold237G00150 [Cucumis melo var. makuwa]2.60e-98100Show/hide
Query:  MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSFVRIHAVPLETTKFETRTKSVKFD
        MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSFVRIHAVPLETTKFETRTKSVKFD
Subjt:  MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSFVRIHAVPLETTKFETRTKSVKFD

Query:  WPSDLDPPQTKKDSSSDLEYDPFDQQICDRRKEKGKAIMSINE
        WPSDLDPPQTKKDSSSDLEYDPFDQQICDRRKEKGKAIMSINE
Subjt:  WPSDLDPPQTKKDSSSDLEYDPFDQQICDRRKEKGKAIMSINE

TrEMBL top hitse value%identityAlignment
A0A5A7SNW5 Uncharacterized protein7.9e-3955.94Show/hide
Query:  MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSFVRIHAVPLETTKFETRTKSVKFD
        ME LI+ K+KVRYNY GFVPAS++I+DDQG  +++  VPPP  RWFVER V  HGSFK+KA +EFDEHNP A+ Y++    A+P  TTK       +  D
Subjt:  MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSFVRIHAVPLETTKFETRTKSVKFD

Query:  WPSDLDPPQTKKDSSSDLEYDPFDQQICDRRKEKGKAIMSINE
          S  +  Q KK++SS+ EYDPFDQQ+C++RKEKGKAI+ IN+
Subjt:  WPSDLDPPQTKKDSSSDLEYDPFDQQICDRRKEKGKAIMSINE

A0A5A7U652 Uncharacterized protein1.6e-76100Show/hide
Query:  MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSFVRIHAVPLETTKFETRTKSVKFD
        MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSFVRIHAVPLETTKFETRTKSVKFD
Subjt:  MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSFVRIHAVPLETTKFETRTKSVKFD

Query:  WPSDLDPPQTKKDSSSDLEYDPFDQQICDRRKEKGKAIMSINE
        WPSDLDPPQTKKDSSSDLEYDPFDQQICDRRKEKGKAIMSINE
Subjt:  WPSDLDPPQTKKDSSSDLEYDPFDQQICDRRKEKGKAIMSINE

A0A5D3BEH7 Uncharacterized protein7.2e-4059.44Show/hide
Query:  MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSFVRIHAVPLETTKFETRTKSVKFD
        MENLI+ +V VRYNY+GFVPAS L  DDQG E+++YIVPP DGRWFVERNV+FHGSF+T+A +EFDEHN +A+A+SF+R H VP    K +    + + D
Subjt:  MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSFVRIHAVPLETTKFETRTKSVKFD

Query:  WPSDLDPPQTKKDSSSDLEYDPFDQQICDRRKEKGKAIMSINE
          ++ D    KKDSSSD + DPFDQ   ++ KEKGKA+MSINE
Subjt:  WPSDLDPPQTKKDSSSDLEYDPFDQQICDRRKEKGKAIMSINE

A0A5D3DAB2 Uncharacterized protein1.6e-76100Show/hide
Query:  MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSFVRIHAVPLETTKFETRTKSVKFD
        MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSFVRIHAVPLETTKFETRTKSVKFD
Subjt:  MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSFVRIHAVPLETTKFETRTKSVKFD

Query:  WPSDLDPPQTKKDSSSDLEYDPFDQQICDRRKEKGKAIMSINE
        WPSDLDPPQTKKDSSSDLEYDPFDQQICDRRKEKGKAIMSINE
Subjt:  WPSDLDPPQTKKDSSSDLEYDPFDQQICDRRKEKGKAIMSINE

A0A5D3DFM9 LINE-1 retrotransposable element ORF2 protein2.0e-3755.94Show/hide
Query:  MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSFVRIHAVPLETTKFETRTKSVKFD
        ME LI+ K+KVRYNY GFVPASVLI+D+QG  +++  VPP   RW VERNV  HG+FKTKA DEFD+HNP A+AY++    A+PLE+T+       +  D
Subjt:  MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSFVRIHAVPLETTKFETRTKSVKFD

Query:  WPSDLDPPQTKKDSSSDLEYDPFDQQICDRRKEKGKAIMSINE
          S  +  Q KK++SS+ EYDPFDQQ+ +RRKEKGK I+ IN+
Subjt:  WPSDLDPPQTKKDSSSDLEYDPFDQQICDRRKEKGKAIMSINE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAACCTCATTGAAGTTAAGGTCAAAGTTAGATATAACTACGCAGGATTTGTGCCAGCATCCGTTCTTATCTCTGATGATCAAGGAGTAGAATATGTTGTATACAT
TGTTCCTCCACCTGATGGTAGGTGGTTTGTGGAAAGGAATGTTAGTTTCCATGGTTCTTTCAAAACTAAAGCAACTGATGAATTTGATGAACACAATCCTCAAGCTAAAG
CATATTCCTTTGTCCGAATTCATGCAGTGCCATTGGAAACAACCAAGTTTGAAACGAGAACCAAATCTGTTAAGTTTGACTGGCCATCTGATTTGGATCCCCCACAAACC
AAGAAAGACAGCTCGTCTGATTTAGAATATGACCCCTTTGATCAACAAATCTGTGATAGAAGGAAAGAGAAAGGGAAAGCAATTATGTCCATTAATGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAACCTCATTGAAGTTAAGGTCAAAGTTAGATATAACTACGCAGGATTTGTGCCAGCATCCGTTCTTATCTCTGATGATCAAGGAGTAGAATATGTTGTATACAT
TGTTCCTCCACCTGATGGTAGGTGGTTTGTGGAAAGGAATGTTAGTTTCCATGGTTCTTTCAAAACTAAAGCAACTGATGAATTTGATGAACACAATCCTCAAGCTAAAG
CATATTCCTTTGTCCGAATTCATGCAGTGCCATTGGAAACAACCAAGTTTGAAACGAGAACCAAATCTGTTAAGTTTGACTGGCCATCTGATTTGGATCCCCCACAAACC
AAGAAAGACAGCTCGTCTGATTTAGAATATGACCCCTTTGATCAACAAATCTGTGATAGAAGGAAAGAGAAAGGGAAAGCAATTATGTCCATTAATGAATAG
Protein sequenceShow/hide protein sequence
MENLIEVKVKVRYNYAGFVPASVLISDDQGVEYVVYIVPPPDGRWFVERNVSFHGSFKTKATDEFDEHNPQAKAYSFVRIHAVPLETTKFETRTKSVKFDWPSDLDPPQT
KKDSSSDLEYDPFDQQICDRRKEKGKAIMSINE