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IVF0009389 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009389
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationchr01:10017557..10017763
RNA-Seq ExpressionIVF0009389
SyntenyIVF0009389
Gene Ontology termsGO:0009791 - post-embryonic development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051113.1 gag-pol polyprotein [Cucumis melo var. makuwa]3.60e-2476.56Show/hide
Query:  MKTNSGQHSETSPSLSPSPASCTNNAMGTIRSSKPSLPNKKRARATMKTTSTIWDHFTKLDKNS
        M+T+SGQHSETSPSLSPSPA  TNNA GT+ SSKP LP+KK+ RAT KTTST+WDHFTKL+KN+
Subjt:  MKTNSGQHSETSPSLSPSPASCTNNAMGTIRSSKPSLPNKKRARATMKTTSTIWDHFTKLDKNS

KAA0065439.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]5.20e-2476.12Show/hide
Query:  MKTNSGQHSETSPSLSPSPASCTNNAMGTIRSSKPSLPNKKRARATMKTTSTIWDHFTKLDKNSSWC
        M+T+SGQHSETSPSLSPSPA  TNNA GT+ SSKP LP+KK+ RAT KTTST+WDHFTKL++NSS C
Subjt:  MKTNSGQHSETSPSLSPSPASCTNNAMGTIRSSKPSLPNKKRARATMKTTSTIWDHFTKLDKNSSWC

TYK02703.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.76e-2476.56Show/hide
Query:  MKTNSGQHSETSPSLSPSPASCTNNAMGTIRSSKPSLPNKKRARATMKTTSTIWDHFTKLDKNS
        M+T+SGQHSETSPSLSPSPA  TNNA GT+ SSKP LP+KK+ RAT KTTST+WDHFTKL+KN+
Subjt:  MKTNSGQHSETSPSLSPSPASCTNNAMGTIRSSKPSLPNKKRARATMKTTSTIWDHFTKLDKNS

TYK08901.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]9.04e-2676.12Show/hide
Query:  MKTNSGQHSETSPSLSPSPASCTNNAMGTIRSSKPSLPNKKRARATMKTTSTIWDHFTKLDKNSSWC
        M+T+SGQHSETSPSLSPSPA  TNNA GT+ SSKP LP+KK+ RAT KTTST+WDHFTKL++NSS C
Subjt:  MKTNSGQHSETSPSLSPSPASCTNNAMGTIRSSKPSLPNKKRARATMKTTSTIWDHFTKLDKNSSWC

TYK18867.1 hypothetical protein E5676_scaffold204G00690 [Cucumis melo var. makuwa]8.38e-2576.12Show/hide
Query:  MKTNSGQHSETSPSLSPSPASCTNNAMGTIRSSKPSLPNKKRARATMKTTSTIWDHFTKLDKNSSWC
        M+T+SGQHSETSPSLSP+PA  TNNA GT+ SS+P LP+KKRARA+ KTTST WDHFTKL+KNSS C
Subjt:  MKTNSGQHSETSPSLSPSPASCTNNAMGTIRSSKPSLPNKKRARATMKTTSTIWDHFTKLDKNSSWC

TrEMBL top hitse value%identityAlignment
A0A5A7SRD2 Zinc finger BED domain-containing protein RICESLEEPER 2-like1.3e-1874.63Show/hide
Query:  MKTNSGQHSETSPSLSPSPASCTNNAMGTIRSSKPSLPNKKRARATMKTTSTIWDHFTKLDKNSSWC
        M+T+SGQHSETSPSLSPSPA  TNN  GT+ SSKP LP+KK+ RAT KTTST+WDHFTKL++NSS C
Subjt:  MKTNSGQHSETSPSLSPSPASCTNNAMGTIRSSKPSLPNKKRARATMKTTSTIWDHFTKLDKNSSWC

A0A5A7VIJ7 Zinc finger BED domain-containing protein RICESLEEPER 2-like4.3e-1976.12Show/hide
Query:  MKTNSGQHSETSPSLSPSPASCTNNAMGTIRSSKPSLPNKKRARATMKTTSTIWDHFTKLDKNSSWC
        M+T+SGQHSETSPSLSPSPA  TNNA GT+ SSKP LP+KK+ RAT KTTST+WDHFTKL++NSS C
Subjt:  MKTNSGQHSETSPSLSPSPASCTNNAMGTIRSSKPSLPNKKRARATMKTTSTIWDHFTKLDKNSSWC

A0A5D3C9B8 Zinc finger BED domain-containing protein RICESLEEPER 2-like4.3e-1976.12Show/hide
Query:  MKTNSGQHSETSPSLSPSPASCTNNAMGTIRSSKPSLPNKKRARATMKTTSTIWDHFTKLDKNSSWC
        M+T+SGQHSETSPSLSPSPA  TNNA GT+ SSKP LP+KK+ RAT KTTST+WDHFTKL++NSS C
Subjt:  MKTNSGQHSETSPSLSPSPASCTNNAMGTIRSSKPSLPNKKRARATMKTTSTIWDHFTKLDKNSSWC

A0A5D3CAM1 Zinc finger BED domain-containing protein RICESLEEPER 2-like4.3e-1976.12Show/hide
Query:  MKTNSGQHSETSPSLSPSPASCTNNAMGTIRSSKPSLPNKKRARATMKTTSTIWDHFTKLDKNSSWC
        M+T+SGQHSETSPSLSPSPA  TNNA GT+ SSKP LP+KK+ RAT KTTST+WDHFTKL++NSS C
Subjt:  MKTNSGQHSETSPSLSPSPASCTNNAMGTIRSSKPSLPNKKRARATMKTTSTIWDHFTKLDKNSSWC

A0A5D3D2K8 Zinc finger BED domain-containing protein RICESLEEPER 2-like1.3e-1874.63Show/hide
Query:  MKTNSGQHSETSPSLSPSPASCTNNAMGTIRSSKPSLPNKKRARATMKTTSTIWDHFTKLDKNSSWC
        M+T+SGQHSETSPSLSPSPA  TNN  GT+ SSKP LP+KK+ RAT KTTST+WDHFTKL++NSS C
Subjt:  MKTNSGQHSETSPSLSPSPASCTNNAMGTIRSSKPSLPNKKRARATMKTTSTIWDHFTKLDKNSSWC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGACAAATAGTGGACAACATAGTGAAACTAGCCCGAGTCTTAGTCCTAGTCCTGCCTCTTGCACTAATAATGCAATGGGAACTATAAGGTCAAGTAAACCATCACT
ACCCAATAAGAAGAGAGCTAGAGCCACTATGAAAACAACTTCCACTATATGGGATCACTTCACAAAGTTGGACAAAAATAGTTCTTGGTGCATATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGACAAATAGTGGACAACATAGTGAAACTAGCCCGAGTCTTAGTCCTAGTCCTGCCTCTTGCACTAATAATGCAATGGGAACTATAAGGTCAAGTAAACCATCACT
ACCCAATAAGAAGAGAGCTAGAGCCACTATGAAAACAACTTCCACTATATGGGATCACTTCACAAAGTTGGACAAAAATAGTTCTTGGTGCATATAA
Protein sequenceShow/hide protein sequence
MKTNSGQHSETSPSLSPSPASCTNNAMGTIRSSKPSLPNKKRARATMKTTSTIWDHFTKLDKNSSWCI