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IVF0009398 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009398
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptiontrafficking protein particle complex subunit 2-like
Genome locationchr11:74121..78555
RNA-Seq ExpressionIVF0009398
SyntenyIVF0009398
Gene Ontology termsGO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030008 - TRAPP complex (cellular component)
InterPro domainsIPR006722 - Trafficking protein particle complex subunit 2
IPR011012 - Longin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604699.1 Trafficking protein particle complex subunit 2, partial [Cucurbita argyrosperma subsp. sororia]4.16e-9098.53Show/hide
Query:  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEV
        MA TACFIIVSRNNIPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEV
Subjt:  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEV

Query:  HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

XP_004147330.1 transport protein particle 20 kDa subunit [Cucumis sativus]3.86e-8897.79Show/hide
Query:  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEV
        MA TACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAG HTRLMLLHDSRNDDGIKSFFQEV
Subjt:  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEV

Query:  HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        HELYIKTILNPLYLPGSR+TSSHFDTKVRALARKYL
Subjt:  HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

XP_008460820.1 PREDICTED: trafficking protein particle complex subunit 2 isoform X2 [Cucumis melo]3.31e-8999.26Show/hide
Query:  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEV
        MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAG HTRLMLLHDSRNDDGIKSFFQEV
Subjt:  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEV

Query:  HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

XP_016902622.1 PREDICTED: trafficking protein particle complex subunit 2 isoform X1 [Cucumis melo]1.24e-91100Show/hide
Query:  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEV
        MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEV
Subjt:  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEV

Query:  HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

XP_038900562.1 transport protein particle 20 kDa subunit [Benincasa hispida]2.72e-8898.53Show/hide
Query:  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEV
        MA TACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAG HTRLMLLHDSRNDDGIKSFFQEV
Subjt:  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEV

Query:  HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

TrEMBL top hitse value%identityAlignment
A0A1S3CCU2 trafficking protein particle complex subunit 2 isoform X24.5e-6899.26Show/hide
Query:  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEV
        MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAG HTRLMLLHDSRNDDGIKSFFQEV
Subjt:  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEV

Query:  HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

A0A1S4E319 trafficking protein particle complex subunit 2 isoform X18.3e-70100Show/hide
Query:  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEV
        MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEV
Subjt:  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEV

Query:  HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

A0A6J1DTW9 transport protein particle 20 kDa subunit2.5e-6697.06Show/hide
Query:  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEV
        MA TACFIIVSRN+IPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAG HTRLMLLHDSRNDDGIKSFFQEV
Subjt:  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEV

Query:  HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

A0A6J1G7X4 transport protein particle 20 kDa subunit isoform X26.5e-6797.79Show/hide
Query:  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEV
        MA TACFIIVSRNNIPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAG HTRLMLLHDSRNDDGIKSFFQEV
Subjt:  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEV

Query:  HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

A0A6J1I1U1 transport protein particle 20 kDa subunit isoform X26.5e-6797.79Show/hide
Query:  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEV
        MA TACFIIVSRNNIPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAG HTRLMLLHDSRNDDGIKSFFQEV
Subjt:  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEV

Query:  HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

SwissProt top hitse value%identityAlignment
E2QV03 Trafficking protein particle complex subunit 21.6e-3046.76Show/hide
Query:  MANTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFF
        M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+LK VD+FN+  VS +VTAG H R ++LHD R +DGIK+FF
Subjt:  MANTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFF

Query:  QEVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
         +V++LYIK  +NP Y P S I SS FD KV+ L +K+L
Subjt:  QEVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

F1SRI0 Trafficking protein particle complex subunit 21.6e-3046.76Show/hide
Query:  MANTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFF
        M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+LK VD+FN+  VS +VTAG H R ++LHD R +DGIK+FF
Subjt:  MANTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFF

Query:  QEVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
         +V++LYIK  +NP Y P S I SS FD KV+ L +K+L
Subjt:  QEVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

P0DI81 Trafficking protein particle complex subunit 22.1e-3046.76Show/hide
Query:  MANTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFF
        M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+LK VD+FN+  VS +VTAG H R ++LHD R +DGIK+FF
Subjt:  MANTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFF

Query:  QEVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
         +V++LYIK  +NP Y P S I SS FD KV+ L +K+L
Subjt:  QEVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

P0DI82 Trafficking protein particle complex subunit 2B2.1e-3046.76Show/hide
Query:  MANTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFF
        M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+LK VD+FN+  VS +VTAG H R ++LHD R +DGIK+FF
Subjt:  MANTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFF

Query:  QEVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
         +V++LYIK  +NP Y P S I SS FD KV+ L +K+L
Subjt:  QEVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

Q3T0F2 Trafficking protein particle complex subunit 21.6e-3046.76Show/hide
Query:  MANTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFF
        M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+LK VD+FN+  VS +VTAG H R ++LHD R +DGIK+FF
Subjt:  MANTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFF

Query:  QEVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
         +V++LYIK  +NP Y P S I SS FD KV+ L +K+L
Subjt:  QEVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

Arabidopsis top hitse value%identityAlignment
AT1G80500.1 SNARE-like superfamily protein1.0e-6791.91Show/hide
Query:  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEV
        MANTACFIIV RN+IPIYEAEVGSA KRED+AQLHQFILHA+LD+VQDLAWTTSAMFLK+VDRFNDLVVSVYVTAG HTRLMLLHDSRN+DGIKSFFQEV
Subjt:  MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEV

Query:  HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        HELYIK +LNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACACAGCTTGTTTCATCATCGTCAGTAGGAACAATATCCCAATTTATGAAGCTGAAGTCGGATCTGCTGTTAAAAGAGAGGATTCCGCCCAGCTGCATCAATT
TATATTGCATGCGTCCCTTGACATTGTCCAAGACCTGGCATGGACTACTAGTGCCATGTTCTTGAAAGCAGTCGATAGGTTCAATGATTTGGTGGTGTCTGTCTATGTAA
CCGCTGGTCTACATACGCGATTGATGTTACTTCACGACTCTCGCAATGACGATGGAATCAAGAGTTTTTTTCAAGAGGTTCATGAGCTTTACATAAAGACTATACTCAAT
CCTCTCTACTTGCCTGGATCCCGCATCACGTCTTCACATTTTGACACAAAAGTTCGCGCACTCGCAAGGAAGTATCTCTAG
mRNA sequenceShow/hide mRNA sequence
CGAATTGCTACTCAGAATGGCGAACACAGCTTGTTTCATCATCGTCAGTAGGAACAATATCCCAATTTATGAAGCTGAAGTCGGATCTGCTGTTAAAAGAGAGGATTCCG
CCCAGCTGCATCAATTTATATTGCATGCGTCCCTTGACATTGTCCAAGACCTGGCATGGACTACTAGTGCCATGTTCTTGAAAGCAGTCGATAGGTTCAATGATTTGGTG
GTGTCTGTCTATGTAACCGCTGGTCTACATACGCGATTGATGTTACTTCACGACTCTCGCAATGACGATGGAATCAAGAGTTTTTTTCAAGAGGTTCATGAGCTTTACAT
AAAGACTATACTCAATCCTCTCTACTTGCCTGGATCCCGCATCACGTCTTCACATTTTGACACAAAAGTTCGCGCACTCGCAAGGAAGTATCTCTAGTCATCACCTTCAT
TGCAGACCAAATGTGCTTTCATGACAATGCTTCGAAGTTTATAGTAGCCCTAAGTTTTCTTTTAACTGTACAACATTTTAATCTTTGCCATTTGTGGTCCTGACATCAAT
CAATTCAGTAGTTAAATAATTCTCAATGTGTAATATTGACTTTGGAATGGCTTGGTTACGAGTTGGAATTGCACTTCACAGTAATGCGTTTTGCCCTTTTTACTCATCTT
TTGTTGTAGAGAGTACTATCATTATTTGTTGTTATATTCTATAAGGCAGTGGATATGGGATATTAAAGTTGTGTAAAATATGCA
Protein sequenceShow/hide protein sequence
MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILN
PLYLPGSRITSSHFDTKVRALARKYL