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IVF0009399 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009399
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr11:11536863..11537207
RNA-Seq ExpressionIVF0009399
SyntenyIVF0009399
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039561.1 hypothetical protein E6C27_scaffold744G00310 [Cucumis melo var. makuwa]4.80e-3155.17Show/hide
Query:  MAPQERSRRGSQVITGVQGTRTVDRVQESDEMSCNAHNLVGQNVLESMFDRFTKKLNDHFMPTPTTMCKRFGIERLKALRAMTFEGTTNPVDAKKWLSLI
        MAP+ER R   QV  GV  T + ++VQES+E+S N ++ + QN  +SMFDRF ++L DHFMPTP  + KRF IERL+AL A TFE T N  D KKWL+LI
Subjt:  MAPQERSRRGSQVITGVQGTRTVDRVQESDEMSCNAHNLVGQNVLESMFDRFTKKLNDHFMPTPTTMCKRFGIERLKALRAMTFEGTTNPVDAKKWLSLI

Query:  EKCFGV--WSASKKEK
        EK FGV  W   +K K
Subjt:  EKCFGV--WSASKKEK

KAA0047014.1 hypothetical protein E6C27_scaffold230G002160 [Cucumis melo var. makuwa]1.69e-3563.21Show/hide
Query:  RRGSQVITGVQGTRTVDRVQESDEMSCNAHNLVGQNVLESMFDRFTKKLNDHFMPTPTTMCKRFGIERLKALRAMTFEGTTNPVDAKKWLSLIEKCFGVW
        RRG QV   V  TR  +R Q S ++S N H+ V QNV ESMFDRF ++L DHFMP P+T+ KRFGIERLKAL AMTFEG TN  DA K LSL+EKCFGV 
Subjt:  RRGSQVITGVQGTRTVDRVQESDEMSCNAHNLVGQNVLESMFDRFTKKLNDHFMPTPTTMCKRFGIERLKALRAMTFEGTTNPVDAKKWLSLIEKCFGVW

Query:  SASKKE
           KKE
Subjt:  SASKKE

KAA0053236.1 uncharacterized protein E6C27_scaffold102G00210 [Cucumis melo var. makuwa]3.43e-7497.37Show/hide
Query:  MAPQERSRRGSQVITGVQGTRTVDRVQESDEMSCNAHNLVGQNVLESMFDRFTKKLNDHFMPTPTTMCKRFGIERLKALRAMTFEGTTNPVDAKKWLSLI
        MAPQERSRRGSQVITGVQGTRTVDRVQESDEMSCNAHNLVGQNVLESMFDRFTKKLNDHFMPTP+TM KRFGI+RLKALRAMTFEGTTNPVDAKKWLSLI
Subjt:  MAPQERSRRGSQVITGVQGTRTVDRVQESDEMSCNAHNLVGQNVLESMFDRFTKKLNDHFMPTPTTMCKRFGIERLKALRAMTFEGTTNPVDAKKWLSLI

Query:  EKCFGVWSASKKEK
        EKCFGVWSASKKEK
Subjt:  EKCFGVWSASKKEK

TYJ97632.1 gag/pol protein [Cucumis melo var. makuwa]6.18e-75100Show/hide
Query:  MAPQERSRRGSQVITGVQGTRTVDRVQESDEMSCNAHNLVGQNVLESMFDRFTKKLNDHFMPTPTTMCKRFGIERLKALRAMTFEGTTNPVDAKKWLSLI
        MAPQERSRRGSQVITGVQGTRTVDRVQESDEMSCNAHNLVGQNVLESMFDRFTKKLNDHFMPTPTTMCKRFGIERLKALRAMTFEGTTNPVDAKKWLSLI
Subjt:  MAPQERSRRGSQVITGVQGTRTVDRVQESDEMSCNAHNLVGQNVLESMFDRFTKKLNDHFMPTPTTMCKRFGIERLKALRAMTFEGTTNPVDAKKWLSLI

Query:  EKCFGVWSASKKEK
        EKCFGVWSASKKEK
Subjt:  EKCFGVWSASKKEK

TYK28108.1 hypothetical protein E5676_scaffold289G00110 [Cucumis melo var. makuwa]2.31e-2859.6Show/hide
Query:  GVQGTRTVDRVQESDEMSCNAHNLVGQNVLESMFDRFTKKLNDHFMPTPTTMCKRFGIERLKALRAMTFEGTTNPVDAKKWLSLIEKCFGVWSASKKEK
        GV  T + +RVQES+++S N H+ VGQN  E MFDRF ++L D FMPT +T+ KR  IE LKAL AMTFEGTTNP DAKKWLSLIE    V    K +K
Subjt:  GVQGTRTVDRVQESDEMSCNAHNLVGQNVLESMFDRFTKKLNDHFMPTPTTMCKRFGIERLKALRAMTFEGTTNPVDAKKWLSLIEKCFGVWSASKKEK

TrEMBL top hitse value%identityAlignment
A0A5A7TVM1 Uncharacterized protein4.3e-2762.62Show/hide
Query:  RRGSQVITGVQGTRTVDRVQESDEMSCNAHNLVGQNVLESMFDRFTKKLNDHFMPTPTTMCKRFGIERLKALRAMTFEGTTNPVDAKKWLSLIEKCFGVW
        RRG QV   V  TR  +R Q S ++S N H+ V QNV ESMFDRF ++L DHFMP P+T+ KRFGIERLKAL AMTFEG TN  DA K LSL+EKCFGV 
Subjt:  RRGSQVITGVQGTRTVDRVQESDEMSCNAHNLVGQNVLESMFDRFTKKLNDHFMPTPTTMCKRFGIERLKALRAMTFEGTTNPVDAKKWLSLIEKCFGVW

Query:  SASKKEK
           KKE+
Subjt:  SASKKEK

A0A5A7UG91 Uncharacterized protein2.0e-5697.37Show/hide
Query:  MAPQERSRRGSQVITGVQGTRTVDRVQESDEMSCNAHNLVGQNVLESMFDRFTKKLNDHFMPTPTTMCKRFGIERLKALRAMTFEGTTNPVDAKKWLSLI
        MAPQERSRRGSQVITGVQGTRTVDRVQESDEMSCNAHNLVGQNVLESMFDRFTKKLNDHFMPTP+TM KRFGI+RLKALRAMTFEGTTNPVDAKKWLSLI
Subjt:  MAPQERSRRGSQVITGVQGTRTVDRVQESDEMSCNAHNLVGQNVLESMFDRFTKKLNDHFMPTPTTMCKRFGIERLKALRAMTFEGTTNPVDAKKWLSLI

Query:  EKCFGVWSASKKEK
        EKCFGVWSASKKEK
Subjt:  EKCFGVWSASKKEK

A0A5D3BCS9 Gag/pol protein1.2e-58100Show/hide
Query:  MAPQERSRRGSQVITGVQGTRTVDRVQESDEMSCNAHNLVGQNVLESMFDRFTKKLNDHFMPTPTTMCKRFGIERLKALRAMTFEGTTNPVDAKKWLSLI
        MAPQERSRRGSQVITGVQGTRTVDRVQESDEMSCNAHNLVGQNVLESMFDRFTKKLNDHFMPTPTTMCKRFGIERLKALRAMTFEGTTNPVDAKKWLSLI
Subjt:  MAPQERSRRGSQVITGVQGTRTVDRVQESDEMSCNAHNLVGQNVLESMFDRFTKKLNDHFMPTPTTMCKRFGIERLKALRAMTFEGTTNPVDAKKWLSLI

Query:  EKCFGVWSASKKEK
        EKCFGVWSASKKEK
Subjt:  EKCFGVWSASKKEK

A0A5D3BUF6 Uncharacterized protein9.8e-2455.17Show/hide
Query:  MAPQERSRRGSQVITGVQGTRTVDRVQESDEMSCNAHNLVGQNVLESMFDRFTKKLNDHFMPTPTTMCKRFGIERLKALRAMTFEGTTNPVDAKKWLSLI
        MAP+ER R   QV  GV  T + ++VQES+E+S N ++ + QN  +SMFDRF ++L DHFMPTP  + KRF IERL+AL A TFE T N  D KKWL+LI
Subjt:  MAPQERSRRGSQVITGVQGTRTVDRVQESDEMSCNAHNLVGQNVLESMFDRFTKKLNDHFMPTPTTMCKRFGIERLKALRAMTFEGTTNPVDAKKWLSLI

Query:  EKCFGV--WSASKKEK
        EK FGV  W   +K K
Subjt:  EKCFGV--WSASKKEK

A0A5D3DXF8 Uncharacterized protein2.0e-2159.6Show/hide
Query:  GVQGTRTVDRVQESDEMSCNAHNLVGQNVLESMFDRFTKKLNDHFMPTPTTMCKRFGIERLKALRAMTFEGTTNPVDAKKWLSLIEKCFGVWSASKKEK
        GV  T + +RVQES+++S N H+ VGQN  E MFDRF ++L D FMPT +T+ KR  IE LKAL AMTFEGTTNP DAKKWLSLIE    V    K +K
Subjt:  GVQGTRTVDRVQESDEMSCNAHNLVGQNVLESMFDRFTKKLNDHFMPTPTTMCKRFGIERLKALRAMTFEGTTNPVDAKKWLSLIEKCFGVWSASKKEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACCGCAAGAAAGGTCGAGAAGAGGCAGTCAAGTAATAACTGGTGTTCAAGGTACAAGGACCGTTGATAGAGTGCAAGAATCTGACGAGATGTCTTGTAATGCACA
TAACCTTGTTGGCCAAAACGTGTTGGAAAGCATGTTTGACCGCTTCACTAAAAAATTAAATGATCATTTTATGCCTACACCTACCACTATGTGTAAGAGGTTTGGCATTG
AGAGATTAAAGGCGTTGAGAGCAATGACCTTTGAAGGAACCACTAATCCAGTTGATGCAAAGAAGTGGTTGAGTTTGATTGAAAAGTGTTTTGGGGTGTGGAGTGCCTCG
AAGAAAGAAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACCGCAAGAAAGGTCGAGAAGAGGCAGTCAAGTAATAACTGGTGTTCAAGGTACAAGGACCGTTGATAGAGTGCAAGAATCTGACGAGATGTCTTGTAATGCACA
TAACCTTGTTGGCCAAAACGTGTTGGAAAGCATGTTTGACCGCTTCACTAAAAAATTAAATGATCATTTTATGCCTACACCTACCACTATGTGTAAGAGGTTTGGCATTG
AGAGATTAAAGGCGTTGAGAGCAATGACCTTTGAAGGAACCACTAATCCAGTTGATGCAAAGAAGTGGTTGAGTTTGATTGAAAAGTGTTTTGGGGTGTGGAGTGCCTCG
AAGAAAGAAAAGTGA
Protein sequenceShow/hide protein sequence
MAPQERSRRGSQVITGVQGTRTVDRVQESDEMSCNAHNLVGQNVLESMFDRFTKKLNDHFMPTPTTMCKRFGIERLKALRAMTFEGTTNPVDAKKWLSLIEKCFGVWSAS
KKEK