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IVF0009400 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009400
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr03:12320861..12321028
RNA-Seq ExpressionIVF0009400
SyntenyIVF0009400
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054051.1 retrotransposon protein [Cucumis melo var. makuwa]1.47e-2889.09Show/hide
Query:  MTYSDDVDDVDKGDSAYATTTAIEDIHYIETINEWFQWRDELAESMFTDWQLRNA
        MTY DD+DDVD+GDSAYATTTA EDIHYIET NEW QWRDELAESMFTDWQLRNA
Subjt:  MTYSDDVDDVDKGDSAYATTTAIEDIHYIETINEWFQWRDELAESMFTDWQLRNA

KAA0063960.1 retrotransposon protein [Cucumis melo var. makuwa]3.44e-30100Show/hide
Query:  MTYSDDVDDVDKGDSAYATTTAIEDIHYIETINEWFQWRDELAESMFTDWQLRNA
        MTYSDDVDDVDKGDSAYATTTAIEDIHYIETINEWFQWRDELAESMFTDWQLRNA
Subjt:  MTYSDDVDDVDKGDSAYATTTAIEDIHYIETINEWFQWRDELAESMFTDWQLRNA

KAA0066137.1 retrotransposon protein [Cucumis melo var. makuwa]3.84e-2481.82Show/hide
Query:  MTYSDDVDDVDKGDSAYATTTAIEDIHYIETINEWFQWRDELAESMFTDWQLRNA
        MTY D+VDDVD+GDSAYATTT IEDIHYIE  NEW QW ++LAESMFTDWQLRNA
Subjt:  MTYSDDVDDVDKGDSAYATTTAIEDIHYIETINEWFQWRDELAESMFTDWQLRNA

XP_008450472.1 PREDICTED: uncharacterized protein LOC103492066 [Cucumis melo]2.55e-2483.64Show/hide
Query:  MTYSDDVDDVDKGDSAYATTTAIEDIHYIETINEWFQWRDELAESMFTDWQLRNA
        MTY DDVDDVD+GD AYATTT IE+IHYIE  NEW QWRD+LAESMFTDWQLRNA
Subjt:  MTYSDDVDDVDKGDSAYATTTAIEDIHYIETINEWFQWRDELAESMFTDWQLRNA

XP_016899482.1 PREDICTED: uncharacterized protein LOC107990543 [Cucumis melo]9.22e-2587.27Show/hide
Query:  MTYSDDVDDVDKGDSAYATTTAIEDIHYIETINEWFQWRDELAESMFTDWQLRNA
        MTY DDV DVD+GDSAYATTTA EDIHYIET NEW QWRDELAESMFTDW+LRNA
Subjt:  MTYSDDVDDVDKGDSAYATTTAIEDIHYIETINEWFQWRDELAESMFTDWQLRNA

TrEMBL top hitse value%identityAlignment
A0A1S4DU05 uncharacterized protein LOC1079905431.3e-1887.27Show/hide
Query:  MTYSDDVDDVDKGDSAYATTTAIEDIHYIETINEWFQWRDELAESMFTDWQLRNA
        MTY DDV DVD+GDSAYATTTA EDIHYIET NEW QWRDELAESMFTDW+LRNA
Subjt:  MTYSDDVDDVDKGDSAYATTTAIEDIHYIETINEWFQWRDELAESMFTDWQLRNA

A0A5A7SNH9 Putative nuclease HARBI11.3e-1887.27Show/hide
Query:  MTYSDDVDDVDKGDSAYATTTAIEDIHYIETINEWFQWRDELAESMFTDWQLRNA
        MTY DDV DVD+GDSAYATTTA EDIHYIET NEW QWRDELAESMFTDW+LRNA
Subjt:  MTYSDDVDDVDKGDSAYATTTAIEDIHYIETINEWFQWRDELAESMFTDWQLRNA

A0A5D3BDZ0 Retrotransposon protein3.2e-2089.09Show/hide
Query:  MTYSDDVDDVDKGDSAYATTTAIEDIHYIETINEWFQWRDELAESMFTDWQLRNA
        MTY DD+DDVD+GDSAYATTTA EDIHYIET NEW QWRDELAESMFTDWQLRNA
Subjt:  MTYSDDVDDVDKGDSAYATTTAIEDIHYIETINEWFQWRDELAESMFTDWQLRNA

A0A5D3C478 Retrotransposon protein1.4e-23100Show/hide
Query:  MTYSDDVDDVDKGDSAYATTTAIEDIHYIETINEWFQWRDELAESMFTDWQLRNA
        MTYSDDVDDVDKGDSAYATTTAIEDIHYIETINEWFQWRDELAESMFTDWQLRNA
Subjt:  MTYSDDVDDVDKGDSAYATTTAIEDIHYIETINEWFQWRDELAESMFTDWQLRNA

A0A5D3D656 Putative nuclease HARBI11.3e-1887.27Show/hide
Query:  MTYSDDVDDVDKGDSAYATTTAIEDIHYIETINEWFQWRDELAESMFTDWQLRNA
        MTY DDV DVD+GDSAYATTTA EDIHYIET NEW QWRDELAESMFTDW+LRNA
Subjt:  MTYSDDVDDVDKGDSAYATTTAIEDIHYIETINEWFQWRDELAESMFTDWQLRNA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTCCGACGATGTTGACGACGTGGACAAGGGGGACTCCGCGTATGCGACGACCACCGCTATAGAAGACATTCACTACATTGAGACGATAAACGAGTGGTTTCA
ATGGCGCGACGAACTAGCTGAATCGATGTTCACAGATTGGCAGTTGCGTAATGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTCCGACGATGTTGACGACGTGGACAAGGGGGACTCCGCGTATGCGACGACCACCGCTATAGAAGACATTCACTACATTGAGACGATAAACGAGTGGTTTCA
ATGGCGCGACGAACTAGCTGAATCGATGTTCACAGATTGGCAGTTGCGTAATGCTTAG
Protein sequenceShow/hide protein sequence
MTYSDDVDDVDKGDSAYATTTAIEDIHYIETINEWFQWRDELAESMFTDWQLRNA