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IVF0009406 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009406
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGlycine--tRNA ligase beta subunit
Genome locationchr09:22986018..22986513
RNA-Seq ExpressionIVF0009406
SyntenyIVF0009406
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008437471.1 PREDICTED: uncharacterized protein LOC103482883 [Cucumis melo]1.61e-27100Show/hide
Query:  MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFPRRVRFLILHNLPFADRPTALSA
        MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFPRRVRFLILHNLPFADRPTALSA
Subjt:  MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFPRRVRFLILHNLPFADRPTALSA
XP_011654666.1 uncharacterized protein LOC105435431 [Cucumis sativus]2.69e-2696.3Show/hide
Query:  MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFPRRVRFLILHNLPFADRPTALSA
        MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFP RVRFLILHNLPFADRPTAL+A
Subjt:  MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFPRRVRFLILHNLPFADRPTALSA
XP_022970120.1 uncharacterized protein LOC111469109 [Cucurbita maxima]6.77e-2079.63Show/hide
Query:  MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFPRRVRFLILHNLPFADRPTALSA
        MMLVSVLAEILEEYTV+L++VLRQLF+SAPFPRRVRFLILHNLPFA+  ++ S+
Subjt:  MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFPRRVRFLILHNLPFADRPTALSA
XP_023520510.1 uncharacterized protein LOC111783933 [Cucurbita pepo subsp. pepo]7.13e-2079.63Show/hide
Query:  MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFPRRVRFLILHNLPFADRPTALSA
        MMLVSVLAEILEEYTV+L++VLRQLF+SAPFPRRVRFLILHNLPFA+  ++ S+
Subjt:  MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFPRRVRFLILHNLPFADRPTALSA
XP_038907007.1 uncharacterized protein LOC120092849 [Benincasa hispida]1.02e-2181.48Show/hide
Query:  MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFPRRVRFLILHNLPFADRPTALSA
        MMLVSVLAEILEEYT VL +VLRQLF+SAPFPRR+RFLILHNLPF DRP+ ++A
Subjt:  MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFPRRVRFLILHNLPFADRPTALSA
TrEMBL top hitse value%identityAlignment
A0A0A0KM75 Uncharacterized protein2.2e-1896.3Show/hide
Query:  MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFPRRVRFLILHNLPFADRPTALSA
        MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFP RVRFLILHNLPFADRPTAL+A
Subjt:  MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFPRRVRFLILHNLPFADRPTALSA
A0A1S3AUP0 uncharacterized protein LOC1034828832.6e-19100Show/hide
Query:  MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFPRRVRFLILHNLPFADRPTALSA
        MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFPRRVRFLILHNLPFADRPTALSA
Subjt:  MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFPRRVRFLILHNLPFADRPTALSA
A0A6J1DZC9 uncharacterized protein LOC1110259991.0e-1086.36Show/hide
Query:  MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFPRRVRFLILHNLP
        MMLVSV+AE+LEEYTV+L++VLRQLF SAPFPRRVRFLILHNLP
Subjt:  MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFPRRVRFLILHNLP
A0A6J1EQP1 uncharacterized protein LOC1114357151.3e-1379.63Show/hide
Query:  MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFPRRVRFLILHNLPFADRPTALSA
        MMLVSVLAEILEEYTV+L++VLRQLF+SAPFPRRVRFLILHNLPFA+  ++ S+
Subjt:  MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFPRRVRFLILHNLPFADRPTALSA
A0A6J1I1Z0 uncharacterized protein LOC1114691091.3e-1379.63Show/hide
Query:  MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFPRRVRFLILHNLPFADRPTALSA
        MMLVSVLAEILEEYTV+L++VLRQLF+SAPFPRRVRFLILHNLPFA+  ++ S+
Subjt:  MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFPRRVRFLILHNLPFADRPTALSA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G33055.1 unknown protein4.2e-0953.85Show/hide
Query:  MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFPRRVRFLILHNLPFADRPTAL
        M+LV+++AE+++EYTVVL+ V+  LF  APFPRR+R  IL++LPF    T+L
Subjt:  MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFPRRVRFLILHNLPFADRPTAL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCTCGTATCGGTACTGGCAGAGATTCTTGAGGAATACACGGTGGTGCTCTCGGACGTGCTGCGGCAGCTCTTTTACTCCGCCCCATTTCCCCGCCGTGTTCGATT
TCTCATCCTTCATAATCTCCCTTTCGCCGATCGCCCAACCGCTCTATCGGCTTAA
mRNA sequenceShow/hide mRNA sequence
CTCAATCCTCACTGCTCCAAAGCTCCATCAAATCAATCATTCTACAAAGAACGCATAAAGAAATCAAGACGCGAAAAGAAAAAAAGAAAAAAAAGGAGAAAGAACCTTCA
TCGTTTCAATTGCTTTTTCCCTTGACGTCGGAGATGATGCTCGTATCGGTACTGGCAGAGATTCTTGAGGAATACACGGTGGTGCTCTCGGACGTGCTGCGGCAGCTCTT
TTACTCCGCCCCATTTCCCCGCCGTGTTCGATTTCTCATCCTTCATAATCTCCCTTTCGCCGATCGCCCAACCGCTCTATCGGCTTAATTAATTAGCCCCCATTTTTGTA
ATTTGTATGATAAATTTTTTTCTTTTTGTTTTTGTTGTTGTTGTTCTACTTTCGGTTTGATCTTTTGTTTATGGAACGATCTGGATTGTTCGTTTTATGGGAATTGTATT
GTTGTTTGAGATTTTGGATCTCTGTTTTCCTCTGTTTTGGATCGGTGACTCAGGAC
Protein sequenceShow/hide protein sequence
MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFPRRVRFLILHNLPFADRPTALSA