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IVF0009418 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009418
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionC2H2-type domain-containing protein
Genome locationchr05:5607526..5608197
RNA-Seq ExpressionIVF0009418
SyntenyIVF0009418
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050710.1 hypothetical protein E6C27_scaffold560G00040 [Cucumis melo var. makuwa]1.60e-138100Show/hide
Query:  MADFARGTTADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRSQDQQQRRFPGGPAFLTPARATAVFLPNRFSSPNSIGFEGAE
        MADFARGTTADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRSQDQQQRRFPGGPAFLTPARATAVFLPNRFSSPNSIGFEGAE
Subjt:  MADFARGTTADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRSQDQQQRRFPGGPAFLTPARATAVFLPNRFSSPNSIGFEGAE

Query:  SVWGNHQISPFGRSVFRDGVPPPYPPPGMVGQYFTNLIGMDEGGGDCTKPYINQLEKCLPKVGKGGEEDDCRQLYLSKIDLTLKL
        SVWGNHQISPFGRSVFRDGVPPPYPPPGMVGQYFTNLIGMDEGGGDCTKPYINQLEKCLPKVGKGGEEDDCRQLYLSKIDLTLKL
Subjt:  SVWGNHQISPFGRSVFRDGVPPPYPPPGMVGQYFTNLIGMDEGGGDCTKPYINQLEKCLPKVGKGGEEDDCRQLYLSKIDLTLKL

KAE8651808.1 hypothetical protein Csa_006798 [Cucumis sativus]8.79e-11888.71Show/hide
Query:  MADFARGTTADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRSQDQQQRRFPGGPAFLTPARATAVFLPNRFSSPNSIGFEGAE
        MADFAR T ADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRR    QQRRFP GPAFLT  RATAVFLPNR+SSPN IGFEGAE
Subjt:  MADFARGTTADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRSQDQQQRRFPGGPAFLTPARATAVFLPNRFSSPNSIGFEGAE

Query:  SVWGNHQISPFGRSVFRDGVPPPYPPPGMVGQYFTNLIGMDEGGG-DCTKPYINQLEKCLPKVGKGGEEDDCRQLYLSKIDLTLKL
        SVWGN QISPFGRSVFR+GV  PYPPPG++GQYFTNLI M+EGGG DCTKPYINQLEKCLPKVG GGEEDDCRQLYLSKIDLTLKL
Subjt:  SVWGNHQISPFGRSVFRDGVPPPYPPPGMVGQYFTNLIGMDEGGG-DCTKPYINQLEKCLPKVGKGGEEDDCRQLYLSKIDLTLKL

KAG6574909.1 hypothetical protein SDJN03_25548, partial [Cucurbita argyrosperma subsp. sororia]2.29e-8369.95Show/hide
Query:  MADFARGTTADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATS-----RRSQDQQQ-RRFPGGPAFLTPARATAVFLPNRFS-SPNS
        MA+F R T ADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGA+S     R+SQ + Q  R P G     P RATA+FLP+R+S  PNS
Subjt:  MADFARGTTADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATS-----RRSQDQQQ-RRFPGGPAFLTPARATAVFLPNRFS-SPNS

Query:  IGFEGAESVWGNHQISPFGRSVFRDGVPPPYPPPGMVGQYFTNLIGMDEGGGDCTKPYINQLEKCLPKVGKGG-EEDDCRQLYLSKIDLTLKL
        +GF+ AES+W N Q+SPF RS+FR+G PP YPPP  VGQY TN    +E  GDCTKPYINQLEKCLPKVG GG EEDD RQLY SK+DL+L+L
Subjt:  IGFEGAESVWGNHQISPFGRSVFRDGVPPPYPPPGMVGQYFTNLIGMDEGGGDCTKPYINQLEKCLPKVGKGG-EEDDCRQLYLSKIDLTLKL

OAY55555.1 hypothetical protein MANES_03G163100v8 [Manihot esculenta]3.46e-1336.07Show/hide
Query:  PLVACRICDAVFSSSQALINHIGAHVSDEGATSRRSQDQ---QQRRF--PGGPAFLTPARATAVFLPNRFSSPNSIGFEGAESVWGNH------------
        P +ACRIC+ VF SSQALI HI +H++DE   SRR Q+    Q+  F  P   A L P   T  F PN +S   S  F+    ++ +             
Subjt:  PLVACRICDAVFSSSQALINHIGAHVSDEGATSRRSQDQ---QQRRF--PGGPAFLTPARATAVFLPNRFSSPNSIGFEGAESVWGNH------------

Query:  -QISPFG-RSVFRDGVPPPYPPPGMVGQYFTNLIGMDEGGG-DCTKPYINQLEKCLP-KVGKGGEEDDCRQLYLSKIDLTLKL
         QIS  G R+ +   VP  +PP     Q    ++ M++    D TKP + QLEK  P K+   G  D+     L  +DLTLKL
Subjt:  -QISPFG-RSVFRDGVPPPYPPPGMVGQYFTNLIGMDEGGG-DCTKPYINQLEKCLP-KVGKGGEEDDCRQLYLSKIDLTLKL

XP_008224336.1 PREDICTED: uncharacterized protein LOC103324080 [Prunus mume]1.16e-1132.68Show/hide
Query:  PLPIP-GSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRSQD--QQQRRFPGGPAFLTPARATAVF-LPNRFSSPN--------SIGFEGA----E
        P  +P GS  +ACRICD VF S+QALINHI +H+ D+G T+ R +   QQ    P       P R+  VF L N F+  N         IGF       +
Subjt:  PLPIP-GSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRSQD--QQQRRFPGGPAFLTPARATAVF-LPNRFSSPN--------SIGFEGA----E

Query:  SVWGNHQISPFG--RSVFRDGVPPPYPPPGMVGQYFTNLIGMDEGGG-----------DCTKPYINQLEKCLPKV-------GKGGEEDDCRQLYLSKID
          +   Q+SP+   R+V  +         G+VG ++  +   +E              DCT P ++QLE+ LP V       G  GE           +D
Subjt:  SVWGNHQISPFG--RSVFRDGVPPPYPPPGMVGQYFTNLIGMDEGGG-----------DCTKPYINQLEKCLPKV-------GKGGEEDDCRQLYLSKID

Query:  LTLKL
        LTLKL
Subjt:  LTLKL

TrEMBL top hitse value%identityAlignment
A0A0A0LNN3 C2H2-type domain-containing protein1.5e-7786.98Show/hide
Query:  MADFARGTTADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRSQDQQQRRFPGGPAFLTPARATAVFLPNRFSSPNSIGFEGAE
        MADFAR T ADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRR    QQRRFP GPAFLT  RATAVFLPNR+SSPN IGFEGAE
Subjt:  MADFARGTTADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRSQDQQQRRFPGGPAFLTPARATAVFLPNRFSSPNSIGFEGAE

Query:  SVWGNHQISPFGRSVFRDGVPPPYPPPGMVGQYFTNLIGMDE-GGGDCTKPYINQLEKCLPKVGKGGEE
        SVWGN QISPFGRSVFR+GV  PYPPPG++GQYFTNLI M+E GGGDCTKPYINQLEKCLPKV KGG E
Subjt:  SVWGNHQISPFGRSVFRDGVPPPYPPPGMVGQYFTNLIGMDE-GGGDCTKPYINQLEKCLPKVGKGGEE

A0A2C9W9J2 C2H2-type domain-containing protein1.7e-0935.56Show/hide
Query:  PLVACRICDAVFSSSQALINHIGAHVSDEGATSRRSQD--QQQRRFPGGPAFLTPARATAVFLPNRFSSPNSIGFEGAESVWGNH-------------QI
        P +ACRIC+ VF SSQALI HI +H++DE   SRR Q+    QR     P+       T  F PN +S   S  F+    ++ +              QI
Subjt:  PLVACRICDAVFSSSQALINHIGAHVSDEGATSRRSQD--QQQRRFPGGPAFLTPARATAVFLPNRFSSPNSIGFEGAESVWGNH-------------QI

Query:  SPFG-RSVFRDGVPPPYPPPGMVGQYFTNLIGM-DEGGGDCTKPYINQLEKCLP-KVGKGGEEDDCRQLYLSKIDLTLKL
        S  G R+ +   V  P+PP     Q    ++ M D    D TKP + QLEK  P K+   G  D+     L  +DLTLKL
Subjt:  SPFG-RSVFRDGVPPPYPPPGMVGQYFTNLIGM-DEGGGDCTKPYINQLEKCLP-KVGKGGEEDDCRQLYLSKIDLTLKL

A0A2N9E7H8 C2H2-type domain-containing protein1.5e-1033.15Show/hide
Query:  VACRICDAVFSSSQALINHIGAHVSDEGATSR------RSQDQQQRRFPGGP-----AFLTPARATAVFLPNRFSSPNSIGFEGAESVWGNHQ-------
        +ACR+CD VF S+QALINHI +H+ +E ATSR      R     QR     P     A   P R T     NR      +        +G ++       
Subjt:  VACRICDAVFSSSQALINHIGAHVSDEGATSR------RSQDQQQRRFPGGP-----AFLTPARATAVFLPNRFSSPNSIGFEGAESVWGNHQ-------

Query:  ----ISPFGRSVFRDGVPPPYPPPGMVGQYFTNLIGMDEGGGDCTKPYINQLEKCLPK-VGKGGEEDDCRQLY-LSKIDLTLKL
            +SP  R+ F   VPP +    ++         ++E  GDCTKPY+NQL+  + K V      DD   +  L+K+DL LKL
Subjt:  ----ISPFGRSVFRDGVPPPYPPPGMVGQYFTNLIGMDEGGGDCTKPYINQLEKCLPK-VGKGGEEDDCRQLY-LSKIDLTLKL

A0A5A7U6B7 C2H2-type domain-containing protein7.5e-106100Show/hide
Query:  MADFARGTTADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRSQDQQQRRFPGGPAFLTPARATAVFLPNRFSSPNSIGFEGAE
        MADFARGTTADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRSQDQQQRRFPGGPAFLTPARATAVFLPNRFSSPNSIGFEGAE
Subjt:  MADFARGTTADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRSQDQQQRRFPGGPAFLTPARATAVFLPNRFSSPNSIGFEGAE

Query:  SVWGNHQISPFGRSVFRDGVPPPYPPPGMVGQYFTNLIGMDEGGGDCTKPYINQLEKCLPKVGKGGEEDDCRQLYLSKIDLTLKL
        SVWGNHQISPFGRSVFRDGVPPPYPPPGMVGQYFTNLIGMDEGGGDCTKPYINQLEKCLPKVGKGGEEDDCRQLYLSKIDLTLKL
Subjt:  SVWGNHQISPFGRSVFRDGVPPPYPPPGMVGQYFTNLIGMDEGGGDCTKPYINQLEKCLPKVGKGGEEDDCRQLYLSKIDLTLKL

A0A5N6L1V8 C2H2-type domain-containing protein1.1e-0830.05Show/hide
Query:  HHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRSQDQQQRRFPGGPAFLTPARATAVFLPNR------FSSPNSIGFEGAESVWGNH
        H  R  P      +ACR+CD VF S+QALINHI +H+++E +T+     Q               RAT   LP++       S PN              
Subjt:  HHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRSQDQQQRRFPGGPAFLTPARATAVFLPNR------FSSPNSIGFEGAESVWGNH

Query:  QISPFGRSVF----RDGVPPPYP-------PPGMVGQYFTNLI-----------GMDEGGGDCTKPYINQLEKCLPKVGKGGEEDDCRQ--LYLSKIDLT
           P  R  F    R   PPP P       P      +   LI             +E  GDCTKPY++QLE  +  V +  + +D       L+K+DL 
Subjt:  QISPFGRSVF----RDGVPPPYP-------PPGMVGQYFTNLI-----------GMDEGGGDCTKPYINQLEKCLPKVGKGGEEDDCRQ--LYLSKIDLT

Query:  LKL
        LKL
Subjt:  LKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATTTCGCCCGAGGAACCACCGCCGATCTCCACCATCTCCGTCCACTTCCAATTCCCGGCAGTCCACTCGTCGCTTGCCGAATCTGCGACGCCGTGTTTTCCAG
TAGCCAAGCCCTTATTAACCACATCGGAGCTCACGTCTCCGACGAAGGCGCCACCTCCAGACGATCACAGGATCAACAACAACGACGGTTTCCGGGTGGTCCGGCGTTCT
TAACGCCGGCAAGAGCGACGGCGGTGTTTCTGCCAAACAGATTTTCATCGCCTAATTCGATTGGTTTCGAGGGGGCGGAATCGGTGTGGGGAAATCATCAAATCTCTCCG
TTCGGAAGAAGTGTGTTTAGAGATGGAGTGCCGCCGCCGTATCCTCCGCCGGGCATGGTGGGTCAGTACTTTACGAATTTGATTGGGATGGATGAGGGAGGCGGTGATTG
TACGAAGCCTTACATAAATCAGTTGGAGAAATGTTTGCCGAAAGTGGGGAAGGGAGGCGAAGAAGACGACTGCCGTCAATTGTATTTAAGTAAAATAGACCTCACCTTGA
AGCTTTAA
mRNA sequenceShow/hide mRNA sequence
TTCATTTTCCCTTTCACCTATAAATTGCCTCTCAATTCCTCAAACATTCAACCATCCGCTGTTCCTTCCACCCCCTCCTCCGCCATTTTCTCCGCCCAAACCTCCCCCAT
GGCCGATTTCGCCCGAGGAACCACCGCCGATCTCCACCATCTCCGTCCACTTCCAATTCCCGGCAGTCCACTCGTCGCTTGCCGAATCTGCGACGCCGTGTTTTCCAGTA
GCCAAGCCCTTATTAACCACATCGGAGCTCACGTCTCCGACGAAGGCGCCACCTCCAGACGATCACAGGATCAACAACAACGACGGTTTCCGGGTGGTCCGGCGTTCTTA
ACGCCGGCAAGAGCGACGGCGGTGTTTCTGCCAAACAGATTTTCATCGCCTAATTCGATTGGTTTCGAGGGGGCGGAATCGGTGTGGGGAAATCATCAAATCTCTCCGTT
CGGAAGAAGTGTGTTTAGAGATGGAGTGCCGCCGCCGTATCCTCCGCCGGGCATGGTGGGTCAGTACTTTACGAATTTGATTGGGATGGATGAGGGAGGCGGTGATTGTA
CGAAGCCTTACATAAATCAGTTGGAGAAATGTTTGCCGAAAGTGGGGAAGGGAGGCGAAGAAGACGACTGCCGTCAATTGTATTTAAGTAAAATAGACCTCACCTTGAAG
CTTTAAAATGTA
Protein sequenceShow/hide protein sequence
MADFARGTTADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRSQDQQQRRFPGGPAFLTPARATAVFLPNRFSSPNSIGFEGAESVWGNHQISP
FGRSVFRDGVPPPYPPPGMVGQYFTNLIGMDEGGGDCTKPYINQLEKCLPKVGKGGEEDDCRQLYLSKIDLTLKL