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IVF0009425 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009425
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr04:5538815..5539075
RNA-Seq ExpressionIVF0009425
SyntenyIVF0009425
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051644.1 retrotransposon protein [Cucumis melo var. makuwa]4.20e-4688.37Show/hide
Query:  MIHEALEYANDQLRAIVELPLRTLQDETTIRKEVLRQLNAMPDLSRLDRAHCSESLFRSLDDMHGFIEIMEEERMDYCTVLLREDP
        M  +  + + D LRAIVELPLRTLQDETTIRKEVLRQLNAMPDLSRLDRAHCSESLFRSLDDMHGFIEIMEEERMDYCTVLLREDP
Subjt:  MIHEALEYANDQLRAIVELPLRTLQDETTIRKEVLRQLNAMPDLSRLDRAHCSESLFRSLDDMHGFIEIMEEERMDYCTVLLREDP

KAA0051652.1 retrotransposon protein [Cucumis melo var. makuwa]1.51e-2052.44Show/hide
Query:  MIHEALEYANDQLRAIVELPLRTLQDETTIRKEVLRQLNAMPDLSRLDRAHCSESLFRSLDDMHGFIEIMEEERMDYCTVLL
        +IH ALE  NDQLR I E P RTL ++T + +E LR L  MP+LS LDRA C   L   +DDM GF+E+ ++ER ++C VLL
Subjt:  MIHEALEYANDQLRAIVELPLRTLQDETTIRKEVLRQLNAMPDLSRLDRAHCSESLFRSLDDMHGFIEIMEEERMDYCTVLL

KAA0056139.1 retrotransposon protein [Cucumis melo var. makuwa]2.28e-2863.53Show/hide
Query:  MIHEALEYANDQLRAIVELPLRTLQDETTIRKEVLRQLNAMPDLSRLDRAHCSESLFRSLDDMHGFIEIMEEERMDYCTVLLRED
        +IH+A++ ANDQLR IVE     LQ+ETT+ +EVL QL+A+P+LSRLDR H S  LF +LDDM GF+EI+E+E+MD+CTVLLRED
Subjt:  MIHEALEYANDQLRAIVELPLRTLQDETTIRKEVLRQLNAMPDLSRLDRAHCSESLFRSLDDMHGFIEIMEEERMDYCTVLLRED

KAA0060299.1 retrotransposon protein [Cucumis melo var. makuwa]8.64e-2962.35Show/hide
Query:  MIHEALEYANDQLRAIVELPLRTLQDETTIRKEVLRQLNAMPDLSRLDRAHCSESLFRSLDDMHGFIEIMEEERMDYCTVLLRED
        +IHE +EY NDQLRAIVE P+  L +ETT+R+EVLR+L AM +LSRLDRA CS SLF SLD+M   + +  EE+M++CT+LLRED
Subjt:  MIHEALEYANDQLRAIVELPLRTLQDETTIRKEVLRQLNAMPDLSRLDRAHCSESLFRSLDDMHGFIEIMEEERMDYCTVLLRED

TYK14144.1 retrotransposon protein [Cucumis melo var. makuwa]2.72e-2864.71Show/hide
Query:  HEALEY---ANDQLRAIVELPLRTLQDETTIRKEVLRQLNAMPDLSRLDRAHCSESLFRSLDDMHGFIEIMEEERMDYCTVLLRE
        H+ +E+   ANDQLRAIVE P   LQ+ETT+R+EVL QL+A+P+LSRLD  HCS  LF +LDDM GF+EI+E+E+MD+CTVLLRE
Subjt:  HEALEY---ANDQLRAIVELPLRTLQDETTIRKEVLRQLNAMPDLSRLDRAHCSESLFRSLDDMHGFIEIMEEERMDYCTVLLRE

TrEMBL top hitse value%identityAlignment
A0A5A7URM1 Retrotransposon protein2.6e-2163.53Show/hide
Query:  MIHEALEYANDQLRAIVELPLRTLQDETTIRKEVLRQLNAMPDLSRLDRAHCSESLFRSLDDMHGFIEIMEEERMDYCTVLLRED
        +IH+A++ ANDQLR IVE     LQ+ETT+ +EVL QL+A+P+LSRLDR H S  LF +LDDM GF+EI+E+E+MD+CTVLLRED
Subjt:  MIHEALEYANDQLRAIVELPLRTLQDETTIRKEVLRQLNAMPDLSRLDRAHCSESLFRSLDDMHGFIEIMEEERMDYCTVLLRED

A0A5A7UUF7 Retrotransposon protein8.2e-1550.59Show/hide
Query:  MIHEALEYANDQLRAIVELPLRTLQDETTIRKEVLRQLNAMPDLSRLDRAHCSESLFRSLDDMHGFIEIMEEERMDYCTVLLRED
        +I +A+E ANDQLR I E P   +QDE   R EV+RQL  +P+LS LDRA C   L ++L DM  F+ + EE +MDYC V+L++D
Subjt:  MIHEALEYANDQLRAIVELPLRTLQDETTIRKEVLRQLNAMPDLSRLDRAHCSESLFRSLDDMHGFIEIMEEERMDYCTVLLRED

A0A5A7V3G0 Retrotransposon protein7.7e-2162.35Show/hide
Query:  MIHEALEYANDQLRAIVELPLRTLQDETTIRKEVLRQLNAMPDLSRLDRAHCSESLFRSLDDMHGFIEIMEEERMDYCTVLLRED
        +IHE +EY NDQLRAIVE P+  L +ETT+R+EVLR+L AM +LSRLDRA CS SLF SLD+M   + +  EE+M++CT+LLRED
Subjt:  MIHEALEYANDQLRAIVELPLRTLQDETTIRKEVLRQLNAMPDLSRLDRAHCSESLFRSLDDMHGFIEIMEEERMDYCTVLLRED

A0A5D3BFC4 Retrotransposon protein2.7e-3488.37Show/hide
Query:  MIHEALEYANDQLRAIVELPLRTLQDETTIRKEVLRQLNAMPDLSRLDRAHCSESLFRSLDDMHGFIEIMEEERMDYCTVLLREDP
        M  +  + + D LRAIVELPLRTLQDETTIRKEVLRQLNAMPDLSRLDRAHCSESLFRSLDDMHGFIEIMEEERMDYCTVLLREDP
Subjt:  MIHEALEYANDQLRAIVELPLRTLQDETTIRKEVLRQLNAMPDLSRLDRAHCSESLFRSLDDMHGFIEIMEEERMDYCTVLLREDP

A0A5D3CSY3 Retrotransposon protein3.4e-2164.71Show/hide
Query:  HEALEY---ANDQLRAIVELPLRTLQDETTIRKEVLRQLNAMPDLSRLDRAHCSESLFRSLDDMHGFIEIMEEERMDYCTVLLRE
        H+ +E+   ANDQLRAIVE P   LQ+ETT+R+EVL QL+A+P+LSRLD  HCS  LF +LDDM GF+EI+E+E+MD+CTVLLRE
Subjt:  HEALEY---ANDQLRAIVELPLRTLQDETTIRKEVLRQLNAMPDLSRLDRAHCSESLFRSLDDMHGFIEIMEEERMDYCTVLLRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATACATGAGGCATTGGAGTATGCGAATGACCAGCTGAGGGCCATTGTCGAGTTGCCTTTGCGGACACTTCAGGATGAGACCACAATTCGCAAGGAAGTCCTTCGTCA
ATTGAATGCGATGCCCGATCTAAGTAGGTTGGATAGGGCACACTGCTCGGAGAGCCTCTTTCGTAGTTTGGACGACATGCATGGCTTCATTGAGATAATGGAAGAGGAGA
GGATGGACTACTGCACAGTCCTCCTACGAGAAGACCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGATACATGAGGCATTGGAGTATGCGAATGACCAGCTGAGGGCCATTGTCGAGTTGCCTTTGCGGACACTTCAGGATGAGACCACAATTCGCAAGGAAGTCCTTCGTCA
ATTGAATGCGATGCCCGATCTAAGTAGGTTGGATAGGGCACACTGCTCGGAGAGCCTCTTTCGTAGTTTGGACGACATGCATGGCTTCATTGAGATAATGGAAGAGGAGA
GGATGGACTACTGCACAGTCCTCCTACGAGAAGACCCATGA
Protein sequenceShow/hide protein sequence
MIHEALEYANDQLRAIVELPLRTLQDETTIRKEVLRQLNAMPDLSRLDRAHCSESLFRSLDDMHGFIEIMEEERMDYCTVLLREDP