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IVF0009447 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009447
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr11:15239855..15240106
RNA-Seq ExpressionIVF0009447
SyntenyIVF0009447
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047896.1 gag/pol protein [Cucumis melo var. makuwa]3.99e-4897.59Show/hide
Query:  MGKGKEVEANVATTKKEFIGGSSPKTKVGPSQMKKKERGILPRIVRERKLLKVNVTTATRMGIGQGIVQSTLLRRKHKVNMIY
        MGKGKEVE NVATTKKEFIGGSSPKTKVGPSQMKKKERGILPRIVRERKLLKVNVTTATRMGIGQGIVQSTLLRRKHKVNM+Y
Subjt:  MGKGKEVEANVATTKKEFIGGSSPKTKVGPSQMKKKERGILPRIVRERKLLKVNVTTATRMGIGQGIVQSTLLRRKHKVNMIY
KAA0054225.1 gag/pol protein [Cucumis melo var. makuwa]1.00e-1265.38Show/hide
Query:  MGKGKEVEANVATTKKEFIGGSSPKTKVGPSQMKKKERGILPRIVRERKLLK
        MGK KEVEANVATT+KE +GGSS KT+VGPSQMKKK +G  P+ ++ +K+ K
Subjt:  MGKGKEVEANVATTKKEFIGGSSPKTKVGPSQMKKKERGILPRIVRERKLLK
TYK02170.1 gag/pol protein [Cucumis melo var. makuwa]1.14e-44100Show/hide
Query:  MGKGKEVEANVATTKKEFIGGSSPKTKVGPSQMKKKERGILPRIVRERKLLKVNVTTATRMGIGQGIVQSTLLRRKHK
        MGKGKEVEANVATTKKEFIGGSSPKTKVGPSQMKKKERGILPRIVRERKLLKVNVTTATRMGIGQGIVQSTLLRRKHK
Subjt:  MGKGKEVEANVATTKKEFIGGSSPKTKVGPSQMKKKERGILPRIVRERKLLKVNVTTATRMGIGQGIVQSTLLRRKHK
TYK09736.1 gag/pol protein [Cucumis melo var. makuwa]3.68e-1370Show/hide
Query:  MGKGKEVEANVATTKKEFIGGSSPKTKVGPSQMKKKERGILPRIVRERKL
        MG+GKE+EANV TTKKEF+GG SPKTKV  SQ +++ER  LPR +RERKL
Subjt:  MGKGKEVEANVATTKKEFIGGSSPKTKVGPSQMKKKERGILPRIVRERKL
TYK29862.1 gag/pol protein [Cucumis melo var. makuwa]1.23e-1163.46Show/hide
Query:  MGKGKEVEANVATTKKEFIGGSSPKTKVGPSQMKKKERGILPRIVRERKLLK
        MGKGKEVEAN+ATT+KE +GGSS KT+VGPSQ+KKK +G  P+  + +K+ K
Subjt:  MGKGKEVEANVATTKKEFIGGSSPKTKVGPSQMKKKERGILPRIVRERKLLK
TrEMBL top hitse value%identityAlignment
A0A5A7U0X9 Gag/pol protein3.1e-3597.59Show/hide
Query:  MGKGKEVEANVATTKKEFIGGSSPKTKVGPSQMKKKERGILPRIVRERKLLKVNVTTATRMGIGQGIVQSTLLRRKHKVNMIY
        MGKGKEVE NVATTKKEFIGGSSPKTKVGPSQMKKKERGILPRIVRERKLLKVNVTTATRMGIGQGIVQSTLLRRKHKVNM+Y
Subjt:  MGKGKEVEANVATTKKEFIGGSSPKTKVGPSQMKKKERGILPRIVRERKLLKVNVTTATRMGIGQGIVQSTLLRRKHKVNMIY
A0A5D3BST1 Gag/pol protein6.4e-33100Show/hide
Query:  MGKGKEVEANVATTKKEFIGGSSPKTKVGPSQMKKKERGILPRIVRERKLLKVNVTTATRMGIGQGIVQSTLLRRKHK
        MGKGKEVEANVATTKKEFIGGSSPKTKVGPSQMKKKERGILPRIVRERKLLKVNVTTATRMGIGQGIVQSTLLRRKHK
Subjt:  MGKGKEVEANVATTKKEFIGGSSPKTKVGPSQMKKKERGILPRIVRERKLLKVNVTTATRMGIGQGIVQSTLLRRKHK
A0A5D3CH76 Gag/pol protein1.1e-0870Show/hide
Query:  MGKGKEVEANVATTKKEFIGGSSPKTKVGPSQMKKKERGILPRIVRERKL
        MG+GKE+EANV TTKKEF+GG SPKTKV  SQ +++ER  LPR +RERKL
Subjt:  MGKGKEVEANVATTKKEFIGGSSPKTKVGPSQMKKKERGILPRIVRERKL
A0A5D3CUE8 Gag/pol protein1.4e-0865.38Show/hide
Query:  MGKGKEVEANVATTKKEFIGGSSPKTKVGPSQMKKKERGILPRIVRERKLLK
        MGK KEVEANVATT+KE +GGSS KT+VGPSQMKKK +G  P+ ++ +K+ K
Subjt:  MGKGKEVEANVATTKKEFIGGSSPKTKVGPSQMKKKERGILPRIVRERKLLK
A0A5D3E1U5 Gag/pol protein4.2e-0863.46Show/hide
Query:  MGKGKEVEANVATTKKEFIGGSSPKTKVGPSQMKKKERGILPRIVRERKLLK
        MGKGKEVEAN+ATT+KE +GGSS KT+VGPSQ+KKK +G  P+  + +K+ K
Subjt:  MGKGKEVEANVATTKKEFIGGSSPKTKVGPSQMKKKERGILPRIVRERKLLK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAAGGGGAAGGAAGTGGAAGCAAATGTTGCAACCACAAAGAAAGAGTTTATAGGAGGATCGTCCCCTAAGACTAAAGTTGGACCTTCACAAATGAAGAAGAAGGA
AAGGGGAATACTCCCAAGAATAGTAAGGGAAAGAAAGTTGCTAAAGGTAAATGTTACCACTGCAACCAGAATGGGGATTGGCCAAGGAATTGTCCAAAGTACCTTGTTGA
GAAGAAAGCACAAGGTAAATATGATTTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTAAGGGGAAGGAAGTGGAAGCAAATGTTGCAACCACAAAGAAAGAGTTTATAGGAGGATCGTCCCCTAAGACTAAAGTTGGACCTTCACAAATGAAGAAGAAGGA
AAGGGGAATACTCCCAAGAATAGTAAGGGAAAGAAAGTTGCTAAAGGTAAATGTTACCACTGCAACCAGAATGGGGATTGGCCAAGGAATTGTCCAAAGTACCTTGTTGA
GAAGAAAGCACAAGGTAAATATGATTTACTAG
Protein sequenceShow/hide protein sequence
MGKGKEVEANVATTKKEFIGGSSPKTKVGPSQMKKKERGILPRIVRERKLLKVNVTTATRMGIGQGIVQSTLLRRKHKVNMIY