CuGenDBv2

Gene ID	IVF0009453
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	ATP-dependent RNA helicase Dbp73D isoform 1
Genome location	tig00001265:285058..287694
RNA-Seq Expression	IVF0009453
Synteny	IVF0009453
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0053008.1 uncharacterized protein E6C27_scaffold344G001200 [Cucumis melo var. makuwa]

1.19e-94

100

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Query:  MVVSEISSYFLFYLSCNFETLMEDGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMRKLPDL
        MVVSEISSYFLFYLSCNFETLMEDGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMRKLPDL
Subjt:  MVVSEISSYFLFYLSCNFETLMEDGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMRKLPDL

Query:  PVMKEAEVGETRPRPTRTILPSISAPEHNILNLLEESGI
        PVMKEAEVGETRPRPTRTILPSISAPEHNILNLLEESGI
Subjt:  PVMKEAEVGETRPRPTRTILPSISAPEHNILNLLEESGI

XP_004146112.1 uncharacterized protein LOC101208810 isoform X1 [Cucumis sativus]

3.97e-77

99.14

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Query:  DGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMRKLPDLPVMKEAEVGETRPRPTRTILPSI
        DGREGLPPNPESTGVSATSA ASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMRKLPDLPVMKEAEVGETRPRPTRTILPSI
Subjt:  DGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMRKLPDLPVMKEAEVGETRPRPTRTILPSI

Query:  SAPEHNILNLLEESGI
        SAPEHNILNLLEESGI
Subjt:  SAPEHNILNLLEESGI

XP_008448621.1 PREDICTED: uncharacterized protein LOC103490741 isoform X1 [Cucumis melo]

3.61e-97

100

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Query:  MLLISMVVSEISSYFLFYLSCNFETLMEDGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMR
        MLLISMVVSEISSYFLFYLSCNFETLMEDGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMR
Subjt:  MLLISMVVSEISSYFLFYLSCNFETLMEDGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMR

Query:  KLPDLPVMKEAEVGETRPRPTRTILPSISAPEHNILNLLEESGI
        KLPDLPVMKEAEVGETRPRPTRTILPSISAPEHNILNLLEESGI
Subjt:  KLPDLPVMKEAEVGETRPRPTRTILPSISAPEHNILNLLEESGI

XP_008448622.1 PREDICTED: uncharacterized protein LOC103490741 isoform X2 [Cucumis melo]

9.74e-78

100

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Query:  DGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMRKLPDLPVMKEAEVGETRPRPTRTILPSI
        DGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMRKLPDLPVMKEAEVGETRPRPTRTILPSI
Subjt:  DGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMRKLPDLPVMKEAEVGETRPRPTRTILPSI

Query:  SAPEHNILNLLEESGI
        SAPEHNILNLLEESGI
Subjt:  SAPEHNILNLLEESGI

XP_031738534.1 uncharacterized protein LOC101208810 isoform X2 [Cucumis sativus]

6.10e-79

99.15

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Query:  MEDGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMRKLPDLPVMKEAEVGETRPRPTRTILP
        MEDGREGLPPNPESTGVSATSA ASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMRKLPDLPVMKEAEVGETRPRPTRTILP
Subjt:  MEDGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMRKLPDLPVMKEAEVGETRPRPTRTILP

Query:  SISAPEHNILNLLEESGI
        SISAPEHNILNLLEESGI
Subjt:  SISAPEHNILNLLEESGI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L159 Uncharacterized protein

2.6e-58

99.14

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Query:  DGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMRKLPDLPVMKEAEVGETRPRPTRTILPSI
        DGREGLPPNPESTGVSATSA ASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMRKLPDLPVMKEAEVGETRPRPTRTILPSI
Subjt:  DGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMRKLPDLPVMKEAEVGETRPRPTRTILPSI

Query:  SAPEHNILNLLEESGI
        SAPEHNILNLLEESGI
Subjt:  SAPEHNILNLLEESGI

A0A1S3BKR4 uncharacterized protein LOC103490741 isoform X1

7.6e-74

100

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Query:  MLLISMVVSEISSYFLFYLSCNFETLMEDGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMR
        MLLISMVVSEISSYFLFYLSCNFETLMEDGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMR
Subjt:  MLLISMVVSEISSYFLFYLSCNFETLMEDGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMR

Query:  KLPDLPVMKEAEVGETRPRPTRTILPSISAPEHNILNLLEESGI
        KLPDLPVMKEAEVGETRPRPTRTILPSISAPEHNILNLLEESGI
Subjt:  KLPDLPVMKEAEVGETRPRPTRTILPSISAPEHNILNLLEESGI

A0A1S3BL03 uncharacterized protein LOC103490741 isoform X2

9.1e-59

100

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Query:  DGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMRKLPDLPVMKEAEVGETRPRPTRTILPSI
        DGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMRKLPDLPVMKEAEVGETRPRPTRTILPSI
Subjt:  DGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMRKLPDLPVMKEAEVGETRPRPTRTILPSI

Query:  SAPEHNILNLLEESGI
        SAPEHNILNLLEESGI
Subjt:  SAPEHNILNLLEESGI

A0A5D3CJW0 Uncharacterized protein

5.5e-72

100

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Query:  MVVSEISSYFLFYLSCNFETLMEDGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMRKLPDL
        MVVSEISSYFLFYLSCNFETLMEDGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMRKLPDL
Subjt:  MVVSEISSYFLFYLSCNFETLMEDGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMRKLPDL

Query:  PVMKEAEVGETRPRPTRTILPSISAPEHNILNLLEESGI
        PVMKEAEVGETRPRPTRTILPSISAPEHNILNLLEESGI
Subjt:  PVMKEAEVGETRPRPTRTILPSISAPEHNILNLLEESGI

A0A6J1HLC4 uncharacterized protein LOC111465213 isoform X2

9.7e-53

90.68

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Query:  MEDGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMRKLPDLPVMKEAEVGETRPRPTRTILP
        MEDG+ GLPPNPE+TGVSAT AA SHGIEVAVEFKPVEHPIEP DND+PIQCPLPEPSILNDGRIWKERVSS+RKLPDLPVMKEAEVGETRPR TRTILP
Subjt:  MEDGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMRKLPDLPVMKEAEVGETRPRPTRTILP

Query:  SISAPEHNILNLLEESGI
        SISAPEHNILNLL+ESG+
Subjt:  SISAPEHNILNLLEESGI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G31940.1 unknown protein

8.2e-36

62.1

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Query:  DGREGLPPNPESTGVSATSA-AASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVS-SMRKLPDLPVMKEAEVGET---------R
        D +E L PN +    + T+A  A+HGIEVA EFKPVEHP+EPLDND PIQCPLPEPSILNDGRIWKERVS SMR+  DL ++K+    E+          
Subjt:  DGREGLPPNPESTGVSATSA-AASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVS-SMRKLPDLPVMKEAEVGET---------R

Query:  PRPTRTILPSISAPEHNILNLLEE
        P+P R+ILPS+SAPEHN+LNLLEE
Subjt:  PRPTRTILPSISAPEHNILNLLEE

AT2G01913.1 unknown protein

2.8e-04

62.07

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Query:  VEFKPVEHPIEPLDNDQPIQCPLPEPSIL
        VEF PVEHPIEP + D+P++CP+P  S L
Subjt:  VEFKPVEHPIEPLDNDQPIQCPLPEPSIL

AT2G35585.1 unknown protein

1.4e-32

57.48

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Query:  DGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERV--SSMRKLPDLPVM-----KEAEVGET-----
        DGRE L P  +    + T+   +HGIEVA EFKPV+HP+EPLDNDQPIQCPLPEPSILNDGR+WKERV  SSMR+  DL ++     +E++V  T     
Subjt:  DGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERV--SSMRKLPDLPVM-----KEAEVGET-----

Query:  --RPRPTRTILPSISAPEHNILNLLEE
          +    R ILPS+SAPEH++LNLLEE
Subjt:  --RPRPTRTILPSISAPEHNILNLLEE

Sequences

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CDS sequence

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ATGCTTCTGATTTCCATGGTTGTTTCTGAGATTTCATCATATTTTCTATTTTACTTGTCCTGTAACTTTGAAACTTTAATGGAGGATGGGAGAGAAGGACTGCCTCCAAA
TCCAGAGAGCACTGGTGTTAGTGCTACTTCTGCTGCTGCTTCTCATGGAATTGAAGTAGCAGTGGAGTTCAAGCCTGTTGAACATCCAATCGAGCCTCTCGACAATGATC
AGCCAATTCAGTGCCCATTGCCCGAACCGTCTATTCTGAATGATGGAAGAATATGGAAGGAACGTGTATCAAGTATGCGAAAACTGCCGGATTTACCTGTTATGAAAGAA
GCTGAAGTTGGCGAGACAAGACCACGACCAACACGCACAATCTTACCATCTATCAGTGCTCCTGAACATAACATCCTAAACCTACTCGAGGAATCCGGGATATAG

mRNA sequence

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GTTGTTTATTCCATAGTAATGGACCAGCTAAGCTTTTATGCTTCTGATTTCCATGGTTGTTTCTGAGATTTCATCATATTTTCTATTTTACTTGTCCTGTAACTTTGAAA
CTTTAATGGAGGATGGGAGAGAAGGACTGCCTCCAAATCCAGAGAGCACTGGTGTTAGTGCTACTTCTGCTGCTGCTTCTCATGGAATTGAAGTAGCAGTGGAGTTCAAG
CCTGTTGAACATCCAATCGAGCCTCTCGACAATGATCAGCCAATTCAGTGCCCATTGCCCGAACCGTCTATTCTGAATGATGGAAGAATATGGAAGGAACGTGTATCAAG
TATGCGAAAACTGCCGGATTTACCTGTTATGAAAGAAGCTGAAGTTGGCGAGACAAGACCACGACCAACACGCACAATCTTACCATCTATCAGTGCTCCTGAACATAACA
TCCTAAACCTACTCGAGGAATCCGGGATATAGCACAACTAGTTACTTCTCATCTGGAATTTAGAGTTCCCTATACAATATTTTTTAAAGTTTTCATCCCCTCCCCCAAAG
TTTTTACCTTTATTGTTTTTTCATGTACAATGTCATGTCACAGGTTCAGTGTTTACATAATATATCAGAAATT

Protein sequence

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MLLISMVVSEISSYFLFYLSCNFETLMEDGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMRKLPDLPVMKE
AEVGETRPRPTRTILPSISAPEHNILNLLEESGI

IVF0009453 (gene) of Melon (IVF77) v1 genome