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IVF0009465 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009465
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description40S ribosomal protein S24
Genome locationchr02:17320786..17323446
RNA-Seq ExpressionIVF0009465
SyntenyIVF0009465
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005829 - cytosol (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001976 - Ribosomal protein S24e
IPR012678 - Ribosomal protein L23/L15e core domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588329.1 40S ribosomal protein S24-2, partial [Cucurbita argyrosperma subsp. sororia]1.99e-5295.51Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP
        MADKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAK   P
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP

XP_004142519.1 40S ribosomal protein S24-1 [Cucumis sativus]6.60e-5395.51Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP
        MADKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAK   P
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP

XP_008455742.1 PREDICTED: 40S ribosomal protein S24-1 [Cucumis melo]2.68e-5295.51Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP
        MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKD NAIFVFKFRTHFGGGKSTGFGLIYDSVENAK   P
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP

XP_008462725.1 PREDICTED: 40S ribosomal protein S24-1 [Cucumis melo]4.64e-5396.63Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP
        MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAK   P
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP

XP_022933090.1 40S ribosomal protein S24-1-like [Cucurbita moschata]6.60e-5395.51Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP
        MADKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAK   P
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP

TrEMBL top hitse value%identityAlignment
A0A0A0LYE3 40S ribosomal protein S248.6e-4095.51Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP
        MADKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAK   P
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP

A0A1S3CHL4 40S ribosomal protein S246.6e-4096.63Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP
        MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAK   P
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP

A0A5D3E1B6 40S ribosomal protein S246.6e-4096.63Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP
        MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAK   P
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP

A0A6J1F3Y6 40S ribosomal protein S248.6e-4095.51Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP
        MADKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAK   P
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP

A0A6J1I401 40S ribosomal protein S248.6e-4095.51Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP
        MADKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAK   P
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP

SwissProt top hitse value%identityAlignment
P62847 40S ribosomal protein S242.6e-2566.67Show/hide
Query:  VTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP
        VTIRTRKFMTNRLL RKQ +IDVLHPG+  V K E++EKLA++Y     + IFVF FRTHFGGGK+TGFG+IYDS++ AK   P
Subjt:  VTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP

Q56JU9 40S ribosomal protein S242.6e-2566.67Show/hide
Query:  VTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP
        VTIRTRKFMTNRLL RKQ +IDVLHPG+  V K E++EKLA++Y     + IFVF FRTHFGGGK+TGFG+IYDS++ AK   P
Subjt:  VTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP

Q8LC83 40S ribosomal protein S24-25.1e-3783.15Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP
        MA+KAVTIRTR FMTNRLL+RKQF+IDVLHPGR NVSKAELKEKLAR+Y+VKD NAIF FKFRTHFGGGKS+G+GLIYD+VENAK   P
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP

Q962Q6 40S ribosomal protein S242.0e-2561.8Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP
        M +   TIRTRKFMTNRLL+RKQ + DVLHPG+P VSK E++EKLA++Y V   + +FVF F+T+FGGGKSTGF LIYD+++ AK   P
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP

Q9SS17 40S ribosomal protein S24-12.7e-3886.52Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP
        MA+KAVTIRTRKFMTNRLLSRKQF+IDVLHPGR NVSKAELKEKLAR+Y+VKD NAIFVFKFRTHFGGGKS+GFGLIYD+VE+AK   P
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP

Arabidopsis top hitse value%identityAlignment
AT3G04920.1 Ribosomal protein S24e family protein1.9e-3986.52Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP
        MA+KAVTIRTRKFMTNRLLSRKQF+IDVLHPGR NVSKAELKEKLAR+Y+VKD NAIFVFKFRTHFGGGKS+GFGLIYD+VE+AK   P
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP

AT5G28060.1 Ribosomal protein S24e family protein3.6e-3883.15Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP
        MA+KAVTIRTR FMTNRLL+RKQF+IDVLHPGR NVSKAELKEKLAR+Y+VKD NAIF FKFRTHFGGGKS+G+GLIYD+VENAK   P
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACAAGGCAGTCACCATACGAACCCGGAAGTTCATGACCAACCGGCTTCTCTCCAGGAAGCAATTTATCATTGATGTTCTTCACCCAGGAAGACCTAATGTCTC
TAAGGCAGAGCTGAAGGAAAAGTTAGCAAGAATATATGATGTGAAGGATGCAAATGCAATTTTTGTCTTTAAGTTCCGAACTCACTTTGGGGGTGGAAAATCAACTGGGT
TTGGTTTGATTTATGATTCTGTTGAAAATGCCAAAAATATGAGCCCAAGTACAGGCTCATCAGGAATGGACTTGACACTAAAGTAG
mRNA sequenceShow/hide mRNA sequence
TGAATGACGGGCTTCGAAGGAAAGCCCATAACAACAACCCATTATAGCAACAATGGCGGCAACTCCTAGGGTTTCATCACTATAACTCAACGTTTCATCACTATCTCTTT
TCCTCTTTGCCGAACCTTCGTCTTCCTGCTCTCTGCTACGCTTCGCTTCGCTTCACTTCACTTCAATTCATCCCATTCGTCAACGACAATGGCGGACAAGGCAGTCACCA
TACGAACCCGGAAGTTCATGACCAACCGGCTTCTCTCCAGGAAGCAATTTATCATTGATGTTCTTCACCCAGGAAGACCTAATGTCTCTAAGGCAGAGCTGAAGGAAAAG
TTAGCAAGAATATATGATGTGAAGGATGCAAATGCAATTTTTGTCTTTAAGTTCCGAACTCACTTTGGGGGTGGAAAATCAACTGGGTTTGGTTTGATTTATGATTCTGT
TGAAAATGCCAAAAATATGAGCCCAAGTACAGGCTCATCAGGAATGGACTTGACACTAAAGTAGAAAAATCAAGGAAGCAAATGAAAGAGAGGAAGAACAGAGCGAAGAA
GATTCGTGGAGTAAAGAAAACAAAGGCCTCAGATGCTGCCAAGGCTGGAAAGAAGAAATGAGTTCACTGCTTTGTTTTTGTGCCTCAGTGTTTTTTCTCTATCATGTCTT
TATTTCGTCCCTCTAAATTTTAATTCTTAAGTGGTGTTGGGCACTGCCAATGAAATCCATGTCTGGAGAATTATTGACACCAATGTTTTGGCCATTAATTTTGAATTTGG
GGAGTTTTTTGCAGGGAACAATTTTGACATTAGTAACCATATATTTTACAGTTATCAAAAGTTTCATTATAAAAA
Protein sequenceShow/hide protein sequence
MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKNMSPSTGSSGMDLTLK