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IVF0009510 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009510
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionAcidic leucine-rich nuclear phosphoprotein 32 family member A-like
Genome locationchr12:11319141..11319365
RNA-Seq ExpressionIVF0009510
SyntenyIVF0009510
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035428.1 uncharacterized protein E6C27_scaffold285G00470 [Cucumis melo var. makuwa]4.68e-41100Show/hide
Query:  MGLPEVDDVENEQLNVLEIFNDNRVDEHIDDDTLCRTDIDPTIIERSVVCHVADEFIDDEDEKLSHQSETS
        MGLPEVDDVENEQLNVLEIFNDNRVDEHIDDDTLCRTDIDPTIIERSVVCHVADEFIDDEDEKLSHQSETS
Subjt:  MGLPEVDDVENEQLNVLEIFNDNRVDEHIDDDTLCRTDIDPTIIERSVVCHVADEFIDDEDEKLSHQSETS

KAA0040564.1 uncharacterized protein E6C27_scaffold262G001340 [Cucumis melo var. makuwa]1.67e-2574.65Show/hide
Query:  LPEVDDVENEQLNVLEIFNDNRVDEHIDDDTLCRTDIDPTIIERSVVCHVADEFIDDEDEKLSHQSETSDD
        +PEVD V NE LNVLEI  ++R+DEHI DDTLCRTD+D TI+ERSVVCHV D+FIDD DE LSH SETSDD
Subjt:  LPEVDDVENEQLNVLEIFNDNRVDEHIDDDTLCRTDIDPTIIERSVVCHVADEFIDDEDEKLSHQSETSDD

KAA0054789.1 uncharacterized protein E6C27_scaffold437G00740 [Cucumis melo var. makuwa]1.44e-2467.12Show/hide
Query:  MGLPEVDDVENEQLNVLEIFNDNRVDEHIDDDTLCRTDIDPTIIERSVVCHVADEFIDDEDEKLSHQSETSDD
        + + EVDDVENE LN+LEI   +RVDEHI+DDT CRTD+DPTI+ER +V HV D+FI+D DE LSH SE SDD
Subjt:  MGLPEVDDVENEQLNVLEIFNDNRVDEHIDDDTLCRTDIDPTIIERSVVCHVADEFIDDEDEKLSHQSETSDD

KAA0057443.1 uncharacterized protein E6C27_scaffold280G003210 [Cucumis melo var. makuwa]1.52e-2972.22Show/hide
Query:  LPEVDDVENEQLNVLEIFNDNRVDEHIDDDTLCRTDIDPTIIERSVVCHVADEFIDDEDEKLSHQSETSDDE
        +PEVDDVENEQLNVLEI  D++VDEHI+DDT+CR D+DPTI+ERS++CH+A+ FI D DE+LSHQS +SDDE
Subjt:  LPEVDDVENEQLNVLEIFNDNRVDEHIDDDTLCRTDIDPTIIERSVVCHVADEFIDDEDEKLSHQSETSDDE

TYK16299.1 gamma-aminobutyrate transaminase POP2 [Cucumis melo var. makuwa]2.53e-2472.46Show/hide
Query:  LPEVDDVENEQLNVLEIFNDNRVDEHIDDDTLCRTDIDPTIIERSVVCHVADEFIDDEDEKLSHQSETS
        +PEVDDVENE LNVLEI   +RVDEHI+DDTLCRTD+DPTI+ER +V HV D+FID+ DE LSH S TS
Subjt:  LPEVDDVENEQLNVLEIFNDNRVDEHIDDDTLCRTDIDPTIIERSVVCHVADEFIDDEDEKLSHQSETS

TrEMBL top hitse value%identityAlignment
A0A5A7TAT1 Uncharacterized protein3.6e-1973.61Show/hide
Query:  LPEVDDVENEQLNVLEIFNDNRVDEHIDDDTLCRTDIDPTIIERSVVCHVADEFIDDEDEKLSHQSETSDDE
        +PEVD V NE LNVLEI  ++R+DEHI DDTLCRTD+D TI+ERSVVCHV D+FIDD DE LSH SETSDD+
Subjt:  LPEVDDVENEQLNVLEIFNDNRVDEHIDDDTLCRTDIDPTIIERSVVCHVADEFIDDEDEKLSHQSETSDDE

A0A5A7TEC7 DUF4218 domain-containing protein1.2e-1769.44Show/hide
Query:  LPEVDDVENEQLNVLEIFNDNRVDEHIDDDTLCRTDIDPTIIERSVVCHVADEFIDDEDEKLSHQSETSDDE
        +PEVDD+ENEQLNVLEI   +RVDEH++DDTL R D+DPTI+ERSVV HV ++FIDD DE+LSH+S TS++E
Subjt:  LPEVDDVENEQLNVLEIFNDNRVDEHIDDDTLCRTDIDPTIIERSVVCHVADEFIDDEDEKLSHQSETSDDE

A0A5D3D1G9 Gamma-aminobutyrate transaminase POP24.0e-1872.46Show/hide
Query:  LPEVDDVENEQLNVLEIFNDNRVDEHIDDDTLCRTDIDPTIIERSVVCHVADEFIDDEDEKLSHQSETS
        +PEVDDVENE LNVLEI   +RVDEHI+DDTLCRTD+DPTI+ER +V HV D+FID+ DE LSH S TS
Subjt:  LPEVDDVENEQLNVLEIFNDNRVDEHIDDDTLCRTDIDPTIIERSVVCHVADEFIDDEDEKLSHQSETS

A0A5D3DQ64 Uncharacterized protein1.2e-30100Show/hide
Query:  MGLPEVDDVENEQLNVLEIFNDNRVDEHIDDDTLCRTDIDPTIIERSVVCHVADEFIDDEDEKLSHQSETS
        MGLPEVDDVENEQLNVLEIFNDNRVDEHIDDDTLCRTDIDPTIIERSVVCHVADEFIDDEDEKLSHQSETS
Subjt:  MGLPEVDDVENEQLNVLEIFNDNRVDEHIDDDTLCRTDIDPTIIERSVVCHVADEFIDDEDEKLSHQSETS

A0A5D3E2M2 Uncharacterized protein3.0e-2172.22Show/hide
Query:  LPEVDDVENEQLNVLEIFNDNRVDEHIDDDTLCRTDIDPTIIERSVVCHVADEFIDDEDEKLSHQSETSDDE
        +PEVDDVENEQLNVLEI  D++VDEHI+DDT+CR D+DPTI+ERS++CH+A+ FI D DE+LSHQS +SDDE
Subjt:  LPEVDDVENEQLNVLEIFNDNRVDEHIDDDTLCRTDIDPTIIERSVVCHVADEFIDDEDEKLSHQSETSDDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACTGCCTGAAGTAGACGATGTTGAAAATGAGCAACTGAATGTACTCGAAATCTTTAACGACAATCGAGTGGATGAACACATCGATGATGACACTTTGTGTAGGAC
TGACATTGATCCTACAATCATTGAAAGATCAGTTGTGTGTCATGTCGCTGACGAGTTCATAGACGATGAAGATGAAAAATTGTCACATCAAAGCGAAACAAGTGACGACG
AATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGACTGCCTGAAGTAGACGATGTTGAAAATGAGCAACTGAATGTACTCGAAATCTTTAACGACAATCGAGTGGATGAACACATCGATGATGACACTTTGTGTAGGAC
TGACATTGATCCTACAATCATTGAAAGATCAGTTGTGTGTCATGTCGCTGACGAGTTCATAGACGATGAAGATGAAAAATTGTCACATCAAAGCGAAACAAGTGACGACG
AATGA
Protein sequenceShow/hide protein sequence
MGLPEVDDVENEQLNVLEIFNDNRVDEHIDDDTLCRTDIDPTIIERSVVCHVADEFIDDEDEKLSHQSETSDDE