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IVF0009530 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009530
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr07:12661723..12662076
RNA-Seq ExpressionIVF0009530
SyntenyIVF0009530
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041970.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]5.11e-5983.78Show/hide
Query:  KATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERKCIEAEK
        +A KH+WTTI+++ALVECLLQLVEEGGWR +N TFK  YLVQVQKLMKEKIP SNIQVT NLESRVK LKKQYT IAKMMGPAC+ FGWNEERKCIEAEK
Subjt:  KATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERKCIEAEK

Query:  SVFDDWVKVRR
        SVFDDWVKV R
Subjt:  SVFDDWVKVRR

KAA0050106.1 retrotransposon protein [Cucumis melo var. makuwa]7.99e-6185.47Show/hide
Query:  MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERK
        MASTNSKATKHRWTTI D+ LVECLLQLVEEGGWRA+N TFK  YLVQVQKLMKEKI  SNIQVT NL+SRVK LKKQY AIA+MMGPACS FGWNEERK
Subjt:  MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERK

Query:  CIEAEKSVFDDWVKVRR
        CIEAEKSVFDDWVK  R
Subjt:  CIEAEKSVFDDWVKVRR

KGN51053.1 hypothetical protein Csa_009100 [Cucumis sativus]3.81e-5476.92Show/hide
Query:  MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERK
        MASTNSKATKHRWTTI             EEGGWRA N TFKP YLVQVQKLMKEKIP SNIQVT NLE RVK LKKQYTAI +MMGP+CSRFGWNE+RK
Subjt:  MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERK

Query:  CIEAEKSVFDDWVKVRR
        CIEAEK VFDD VKVR+
Subjt:  CIEAEKSVFDDWVKVRR

TYJ96933.1 retrotransposon protein [Cucumis melo var. makuwa]2.46e-76100Show/hide
Query:  MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERK
        MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERK
Subjt:  MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERK

Query:  CIEAEKSVFDDWVK
        CIEAEKSVFDDWVK
Subjt:  CIEAEKSVFDDWVK

XP_008455678.1 PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]6.87e-76100Show/hide
Query:  MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERK
        MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERK
Subjt:  MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERK

Query:  CIEAEKSVFDDWVK
        CIEAEKSVFDDWVK
Subjt:  CIEAEKSVFDDWVK

TrEMBL top hitse value%identityAlignment
A0A1S3C252 uncharacterized protein At2g29880-like4.3e-59100Show/hide
Query:  MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERK
        MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERK
Subjt:  MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERK

Query:  CIEAEKSVFDDWVK
        CIEAEKSVFDDWVK
Subjt:  CIEAEKSVFDDWVK

A0A5A7SW62 Myb_DNA-bind_3 domain-containing protein5.7e-4378.95Show/hide
Query:  MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERK
        MAS NSK TKH WTTI+D+ALVECLLQLVE+G WR +N TFKP YLVQVQKLMKEKI  SNIQVT NLES VK LKKQYT IA+MMGP CS F WN+ERK
Subjt:  MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERK

Query:  CIEAEKSVFDDWVK
        CIEAEKSV +DWVK
Subjt:  CIEAEKSVFDDWVK

A0A5A7TF70 Putative nuclease HARBI11.4e-4683.78Show/hide
Query:  KATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERKCIEAEK
        +A KH+WTTI+++ALVECLLQLVEEGGWR +N TFK  YLVQVQKLMKEKIP SNIQVT NLESRVK LKKQYT IAKMMGPAC+ FGWNEERKCIEAEK
Subjt:  KATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERKCIEAEK

Query:  SVFDDWVKVRR
        SVFDDWVKV R
Subjt:  SVFDDWVKVRR

A0A5A7U7F7 Retrotransposon protein2.2e-4785.47Show/hide
Query:  MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERK
        MASTNSKATKHRWTTI D+ LVECLLQLVEEGGWRA+N TFK  YLVQVQKLMKEKI  SNIQVT NL+SRVK LKKQY AIA+MMGPACS FGWNEERK
Subjt:  MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERK

Query:  CIEAEKSVFDDWVKVRR
        CIEAEKSVFDDWVK  R
Subjt:  CIEAEKSVFDDWVKVRR

A0A5D3BC95 Retrotransposon protein4.3e-59100Show/hide
Query:  MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERK
        MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERK
Subjt:  MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERK

Query:  CIEAEKSVFDDWVK
        CIEAEKSVFDDWVK
Subjt:  CIEAEKSVFDDWVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGACAAATTCAAAAGCCACCAAGCATCGGTGGACAACCATTAAAGATGATGCGTTAGTTGAGTGCTTACTACAACTAGTGGAGGAAGGTGGCTGGAGGGCTAA
TAATGAAACATTCAAACCGAGATATTTGGTACAAGTACAAAAACTAATGAAAGAAAAAATTCCTAGAAGCAACATACAAGTGACTTTAAATCTAGAGTCGAGAGTAAAAT
TTCTAAAGAAGCAGTACACTGCCATAGCAAAGATGATGGGGCCAGCGTGTAGTAGGTTTGGTTGGAATGAGGAACGAAAGTGCATTGAGGCAGAGAAATCTGTGTTCGAT
GACTGGGTTAAGGTAAGAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCGACAAATTCAAAAGCCACCAAGCATCGGTGGACAACCATTAAAGATGATGCGTTAGTTGAGTGCTTACTACAACTAGTGGAGGAAGGTGGCTGGAGGGCTAA
TAATGAAACATTCAAACCGAGATATTTGGTACAAGTACAAAAACTAATGAAAGAAAAAATTCCTAGAAGCAACATACAAGTGACTTTAAATCTAGAGTCGAGAGTAAAAT
TTCTAAAGAAGCAGTACACTGCCATAGCAAAGATGATGGGGCCAGCGTGTAGTAGGTTTGGTTGGAATGAGGAACGAAAGTGCATTGAGGCAGAGAAATCTGTGTTCGAT
GACTGGGTTAAGGTAAGAAGATGA
Protein sequenceShow/hide protein sequence
MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERKCIEAEKSVFD
DWVKVRR