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IVF0009536 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009536
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr02:18466706..18467361
RNA-Seq ExpressionIVF0009536
SyntenyIVF0009536
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025321.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.41e-4676.42Show/hide
Query:  MNCVLATENEKLGEEVKKW-----------------RLELEKENDSLNTEAIQVRKKNKRLLRNIADLHE-VEAKKVCITYLKHEIERLNGVALEFQNAL
        MNCVLATENEKL EEVKKW                 RLELEKENDSLNTEAIQVRKKNKRLLRNIA+LHE +EA+KVCIT LKHEIE+LNG+ LEFQNAL
Subjt:  MNCVLATENEKLGEEVKKW-----------------RLELEKENDSLNTEAIQVRKKNKRLLRNIADLHE-VEAKKVCITYLKHEIERLNGVALEFQNAL

Query:  HEQATSSQQTAMEIEVLQHSIKE
        HEQA SSQQTAM IEVLQHSI+E
Subjt:  HEQATSSQQTAMEIEVLQHSIKE

KAA0032013.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.82e-5464.84Show/hide
Query:  FVKKMKSLRHCEGTKDQYDNWRAFRNWITINAMSKSLVPNIELKKYHDGKEEELKRLREMNCVLATENEKLGEEVKKW-----------------RLELE
        FVKKMKSLRHCEGT +QYDNWRA RN ITINAMS+SLVPNIELKKYHD KE+ELKRLREMNCV+ATENEKL EEVKKW                  LELE
Subjt:  FVKKMKSLRHCEGTKDQYDNWRAFRNWITINAMSKSLVPNIELKKYHDGKEEELKRLREMNCVLATENEKLGEEVKKW-----------------RLELE

Query:  KENDSLNTEAIQVRKKNKRLLRNIADLHE-VEAKKVCITYLKHEIERLNGVALEFQNALHEQATSSQQTAMEIEVLQHSIKE
        KENDSLNTEAIQVRKKNKRLLRNIA+LHE +EAKK                                 TA+EIEVLQHSIKE
Subjt:  KENDSLNTEAIQVRKKNKRLLRNIADLHE-VEAKKVCITYLKHEIERLNGVALEFQNALHEQATSSQQTAMEIEVLQHSIKE

KAA0065294.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.99e-4676.42Show/hide
Query:  MNCVLATENEKLGEEVKKW-----------------RLELEKENDSLNTEAIQVRKKNKRLLRNIADLHE-VEAKKVCITYLKHEIERLNGVALEFQNAL
        MNCVLATENEKL EEVKKW                 RLELEKENDSLNTEAIQ+RKKNKRLLRNIA+LHE +EAKKVCIT LKHEIE+LNG+ALEFQNAL
Subjt:  MNCVLATENEKLGEEVKKW-----------------RLELEKENDSLNTEAIQVRKKNKRLLRNIADLHE-VEAKKVCITYLKHEIERLNGVALEFQNAL

Query:  HEQATSSQQTAMEIEVLQHSIKE
        HEQA SSQQTAM IEVLQH I+E
Subjt:  HEQATSSQQTAMEIEVLQHSIKE

TYK09458.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]3.45e-5886.07Show/hide
Query:  MNCVLATENEKLGEEVKKW-----------------RLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEVEAKKVCITYLKHEIERLNGVALEFQNALH
        MNCVLATENEKLGEEVKKW                 RLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEVEAKKVCITYLKHEIERLNGVALEFQNALH
Subjt:  MNCVLATENEKLGEEVKKW-----------------RLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEVEAKKVCITYLKHEIERLNGVALEFQNALH

Query:  EQATSSQQTAMEIEVLQHSIKE
        EQATSSQQTAMEIEVLQHSIKE
Subjt:  EQATSSQQTAMEIEVLQHSIKE

TYK16834.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]4.81e-5464.84Show/hide
Query:  FVKKMKSLRHCEGTKDQYDNWRAFRNWITINAMSKSLVPNIELKKYHDGKEEELKRLREMNCVLATENEKLGEEVKKW-----------------RLELE
        FVKKMKSLRHCEGT +QYDNWRA RN ITINAMS+SLVPNIELKKYHD KE+ELKRLREMNCV+ATENEKL EEVKKW                  LELE
Subjt:  FVKKMKSLRHCEGTKDQYDNWRAFRNWITINAMSKSLVPNIELKKYHDGKEEELKRLREMNCVLATENEKLGEEVKKW-----------------RLELE

Query:  KENDSLNTEAIQVRKKNKRLLRNIADLHE-VEAKKVCITYLKHEIERLNGVALEFQNALHEQATSSQQTAMEIEVLQHSIKE
        KENDSLNTEAIQVRKKNKRLLRNIA+LHE +EAKK                                 TA+EIEVLQHSIKE
Subjt:  KENDSLNTEAIQVRKKNKRLLRNIADLHE-VEAKKVCITYLKHEIERLNGVALEFQNALHEQATSSQQTAMEIEVLQHSIKE

TrEMBL top hitse value%identityAlignment
A0A1S3CLQ1 glial fibrillary acidic protein-like3.4e-3768.67Show/hide
Query:  MSKSLVPNIELKKYHDGKEEELKRLREMNCVLATENEKLGEEVKKW-----------------RLELEKENDSLNTEAIQVRKKNKRLLRNIADLH-EVE
        MS+SLVPNIELKKYHD +E+ELKRLREMNCVLATENEKL EEVKKW                 RLELEKENDSLNTEAIQVRKKNKRLLRNIA+LH E+E
Subjt:  MSKSLVPNIELKKYHDGKEEELKRLREMNCVLATENEKLGEEVKKW-----------------RLELEKENDSLNTEAIQVRKKNKRLLRNIADLH-EVE

Query:  AKKVCITYLKHEIERLNGVALEFQNALHEQATSSQQTAMEIEVLQHSIKE
        A+K                  EFQNALHEQA SSQQTAM IEVLQHSI+E
Subjt:  AKKVCITYLKHEIERLNGVALEFQNALHEQATSSQQTAMEIEVLQHSIKE

A0A5A7SM49 Glial fibrillary acidic protein-like4.4e-3776.42Show/hide
Query:  MNCVLATENEKLGEEVKKW-----------------RLELEKENDSLNTEAIQVRKKNKRLLRNIADLH-EVEAKKVCITYLKHEIERLNGVALEFQNAL
        MNCVLATENEKL EEVKKW                 RLELEKENDSLNTEAIQVRKKNKRLLRNIA+LH E+EA+KVCIT LKHEIE+LNG+ LEFQNAL
Subjt:  MNCVLATENEKLGEEVKKW-----------------RLELEKENDSLNTEAIQVRKKNKRLLRNIADLH-EVEAKKVCITYLKHEIERLNGVALEFQNAL

Query:  HEQATSSQQTAMEIEVLQHSIKE
        HEQA SSQQTAM IEVLQHSI+E
Subjt:  HEQATSSQQTAMEIEVLQHSIKE

A0A5A7SNY0 Glial fibrillary acidic protein-like4.0e-4664.84Show/hide
Query:  FVKKMKSLRHCEGTKDQYDNWRAFRNWITINAMSKSLVPNIELKKYHDGKEEELKRLREMNCVLATENEKLGEEVKKW-----------------RLELE
        FVKKMKSLRHCEGT +QYDNWRA RN ITINAMS+SLVPNIELKKYHD KE+ELKRLREMNCV+ATENEKL EEVKKW                  LELE
Subjt:  FVKKMKSLRHCEGTKDQYDNWRAFRNWITINAMSKSLVPNIELKKYHDGKEEELKRLREMNCVLATENEKLGEEVKKW-----------------RLELE

Query:  KENDSLNTEAIQVRKKNKRLLRNIADLH-EVEAKKVCITYLKHEIERLNGVALEFQNALHEQATSSQQTAMEIEVLQHSIKE
        KENDSLNTEAIQVRKKNKRLLRNIA+LH E+EAKK                                 TA+EIEVLQHSIKE
Subjt:  KENDSLNTEAIQVRKKNKRLLRNIADLH-EVEAKKVCITYLKHEIERLNGVALEFQNALHEQATSSQQTAMEIEVLQHSIKE

A0A5D3CE19 Glial fibrillary acidic protein-like1.3e-4486.07Show/hide
Query:  MNCVLATENEKLGEEVKKW-----------------RLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEVEAKKVCITYLKHEIERLNGVALEFQNALH
        MNCVLATENEKLGEEVKKW                 RLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEVEAKKVCITYLKHEIERLNGVALEFQNALH
Subjt:  MNCVLATENEKLGEEVKKW-----------------RLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEVEAKKVCITYLKHEIERLNGVALEFQNALH

Query:  EQATSSQQTAMEIEVLQHSIKE
        EQATSSQQTAMEIEVLQHSIKE
Subjt:  EQATSSQQTAMEIEVLQHSIKE

A0A5D3D0S2 Glial fibrillary acidic protein-like4.0e-4664.84Show/hide
Query:  FVKKMKSLRHCEGTKDQYDNWRAFRNWITINAMSKSLVPNIELKKYHDGKEEELKRLREMNCVLATENEKLGEEVKKW-----------------RLELE
        FVKKMKSLRHCEGT +QYDNWRA RN ITINAMS+SLVPNIELKKYHD KE+ELKRLREMNCV+ATENEKL EEVKKW                  LELE
Subjt:  FVKKMKSLRHCEGTKDQYDNWRAFRNWITINAMSKSLVPNIELKKYHDGKEEELKRLREMNCVLATENEKLGEEVKKW-----------------RLELE

Query:  KENDSLNTEAIQVRKKNKRLLRNIADLH-EVEAKKVCITYLKHEIERLNGVALEFQNALHEQATSSQQTAMEIEVLQHSIKE
        KENDSLNTEAIQVRKKNKRLLRNIA+LH E+EAKK                                 TA+EIEVLQHSIKE
Subjt:  KENDSLNTEAIQVRKKNKRLLRNIADLH-EVEAKKVCITYLKHEIERLNGVALEFQNALHEQATSSQQTAMEIEVLQHSIKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAAAACAATTTGCGCCAGTTATATGTGGGCTAGAAGATTGAGAATTCTCCAGTCGAGGCATGGAAATTTTGTAAAGAAGATGAAGAGTTTGCGACATTGTGAGGG
TACTAAAGACCAGTATGATAATTGGAGAGCATTTAGAAATTGGATTACAATTAATGCTATGTCAAAATCCTTAGTTCCAAACATAGAATTGAAGAAATATCATGATGGGA
AAGAAGAGGAATTAAAGCGATTAAGAGAAATGAATTGTGTTTTGGCAACAGAGAACGAAAAGTTAGGAGAAGAAGTCAAGAAATGGCGATTGGAGTTGGAGAAGGAAAAC
GATTCTTTAAACACTGAGGCAATTCAAGTGAGAAAAAAGAATAAGAGGTTATTAAGGAATATTGCCGACTTACATGAAGTAGAAGCTAAAAAGGTATGCATTACATATTT
GAAACATGAAATAGAAAGATTGAATGGGGTTGCCTTAGAATTCCAAAATGCATTACATGAACAAGCCACGTCATCTCAACAGACCGCTATGGAAATTGAGGTTCTACAAC
ATTCGATTAAAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAAAACAATTTGCGCCAGTTATATGTGGGCTAGAAGATTGAGAATTCTCCAGTCGAGGCATGGAAATTTTGTAAAGAAGATGAAGAGTTTGCGACATTGTGAGGG
TACTAAAGACCAGTATGATAATTGGAGAGCATTTAGAAATTGGATTACAATTAATGCTATGTCAAAATCCTTAGTTCCAAACATAGAATTGAAGAAATATCATGATGGGA
AAGAAGAGGAATTAAAGCGATTAAGAGAAATGAATTGTGTTTTGGCAACAGAGAACGAAAAGTTAGGAGAAGAAGTCAAGAAATGGCGATTGGAGTTGGAGAAGGAAAAC
GATTCTTTAAACACTGAGGCAATTCAAGTGAGAAAAAAGAATAAGAGGTTATTAAGGAATATTGCCGACTTACATGAAGTAGAAGCTAAAAAGGTATGCATTACATATTT
GAAACATGAAATAGAAAGATTGAATGGGGTTGCCTTAGAATTCCAAAATGCATTACATGAACAAGCCACGTCATCTCAACAGACCGCTATGGAAATTGAGGTTCTACAAC
ATTCGATTAAAGAATAA
Protein sequenceShow/hide protein sequence
MVKTICASYMWARRLRILQSRHGNFVKKMKSLRHCEGTKDQYDNWRAFRNWITINAMSKSLVPNIELKKYHDGKEEELKRLREMNCVLATENEKLGEEVKKWRLELEKEN
DSLNTEAIQVRKKNKRLLRNIADLHEVEAKKVCITYLKHEIERLNGVALEFQNALHEQATSSQQTAMEIEVLQHSIKE