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IVF0009564 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009564
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr01:9890491..9890781
RNA-Seq ExpressionIVF0009564
SyntenyIVF0009564
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036534.1 uncharacterized protein E6C27_scaffold191G00350 [Cucumis melo var. makuwa]1.32e-3467.78Show/hide
Query:  MVKQFQGDLMSSNFNQPFHFEGAQFKRWKQKMLFFLILKKVDVACTNEKQEVPKTNPMEEQINNLTAWTETDFISKNLILTGLIEELYDY
        MV+Q Q DLMS + N+ F FEGA FKRWKQKMLFFL LK+V  ACT+EK EV + +P+EEQ+ NL  WTETDFI KNLIL GL  ELYDY
Subjt:  MVKQFQGDLMSSNFNQPFHFEGAQFKRWKQKMLFFLILKKVDVACTNEKQEVPKTNPMEEQINNLTAWTETDFISKNLILTGLIEELYDY

KAA0048414.1 uncharacterized protein E6C27_scaffold264G001400 [Cucumis melo var. makuwa]8.76e-3568.89Show/hide
Query:  MVKQFQGDLMSSNFNQPFHFEGAQFKRWKQKMLFFLILKKVDVACTNEKQEVPKTNPMEEQINNLTAWTETDFISKNLILTGLIEELYDY
        M  Q Q DLMSS+ N+PF FEGA FKRWKQKMLFFL LKKV  ACT EK +V + +P EEQ+ NL  WTETDFI KNLIL GL  ELYDY
Subjt:  MVKQFQGDLMSSNFNQPFHFEGAQFKRWKQKMLFFLILKKVDVACTNEKQEVPKTNPMEEQINNLTAWTETDFISKNLILTGLIEELYDY

KAA0055814.1 hypothetical protein E6C27_scaffold181G002040 [Cucumis melo var. makuwa]2.50e-3768.89Show/hide
Query:  MVKQFQGDLMSSNFNQPFHFEGAQFKRWKQKMLFFLILKKVDVACTNEKQEVPKTNPMEEQINNLTAWTETDFISKNLILTGLIEELYDY
        M ++ Q DLMSS+FN+PF FEGA FKRWKQKMLFFL LKKV  ACT EK +V + +P EEQ+ NL  WTETDFI KNLIL GL +ELYDY
Subjt:  MVKQFQGDLMSSNFNQPFHFEGAQFKRWKQKMLFFLILKKVDVACTNEKQEVPKTNPMEEQINNLTAWTETDFISKNLILTGLIEELYDY

KAA0058200.1 uncharacterized protein E6C27_scaffold274G005210 [Cucumis melo var. makuwa]1.94e-3567.78Show/hide
Query:  MVKQFQGDLMSSNFNQPFHFEGAQFKRWKQKMLFFLILKKVDVACTNEKQEVPKTNPMEEQINNLTAWTETDFISKNLILTGLIEELYDY
        M  Q Q DLMS + N+PF FEGA FKRWKQKMLFFL LKKV  ACT EK EV + +P E+Q+ NL  WTETDFI KNLIL GL +ELYDY
Subjt:  MVKQFQGDLMSSNFNQPFHFEGAQFKRWKQKMLFFLILKKVDVACTNEKQEVPKTNPMEEQINNLTAWTETDFISKNLILTGLIEELYDY

KAA0060458.1 uncharacterized protein E6C27_scaffold22G002860 [Cucumis melo var. makuwa]6.84e-3466.67Show/hide
Query:  MVKQFQGDLMSSNFNQPFHFEGAQFKRWKQKMLFFLILKKVDVACTNEKQEVPKTNPMEEQINNLTAWTETDFISKNLILTGLIEELYDY
        M  Q Q DLMSS+ N+ F FEGA FKRWKQK+LFFL LKKV  ACT EK +V + +P EEQ+ NL  WTETDFI KNLIL GL +ELYDY
Subjt:  MVKQFQGDLMSSNFNQPFHFEGAQFKRWKQKMLFFLILKKVDVACTNEKQEVPKTNPMEEQINNLTAWTETDFISKNLILTGLIEELYDY

TrEMBL top hitse value%identityAlignment
A0A5A7UA92 Uncharacterized protein1.2e-2570.24Show/hide
Query:  GDLMSSNFNQPFHFEGAQFKRWKQKMLFFLILKKVDVACTNEKQEVPKTNPMEEQINNLTAWTETDFISKNLILTGLIEELYDY
        G LMSS+ N+PF FEGA FKRWKQKMLFFL LKKV  ACT EK +V + +P +EQ+ NLT WTETDFI KNLIL GL +ELYDY
Subjt:  GDLMSSNFNQPFHFEGAQFKRWKQKMLFFLILKKVDVACTNEKQEVPKTNPMEEQINNLTAWTETDFISKNLILTGLIEELYDY

A0A5A7USR3 Uncharacterized protein4.0e-2667.78Show/hide
Query:  MVKQFQGDLMSSNFNQPFHFEGAQFKRWKQKMLFFLILKKVDVACTNEKQEVPKTNPMEEQINNLTAWTETDFISKNLILTGLIEELYDY
        M  Q Q DLMS + N+PF FEGA FKRWKQKMLFFL LKKV  ACT EK EV + +P E+Q+ NL  WTETDFI KNLIL GL +ELYDY
Subjt:  MVKQFQGDLMSSNFNQPFHFEGAQFKRWKQKMLFFLILKKVDVACTNEKQEVPKTNPMEEQINNLTAWTETDFISKNLILTGLIEELYDY

A0A5D3BEH3 Uncharacterized protein1.0e-2668.89Show/hide
Query:  MVKQFQGDLMSSNFNQPFHFEGAQFKRWKQKMLFFLILKKVDVACTNEKQEVPKTNPMEEQINNLTAWTETDFISKNLILTGLIEELYDY
        M  Q Q DLMSS+ N+PF FEGA FKRWKQKMLFFL LKKV  ACT EK +V + +P EEQ+ NL  WTETDFI KNLIL GL  ELYDY
Subjt:  MVKQFQGDLMSSNFNQPFHFEGAQFKRWKQKMLFFLILKKVDVACTNEKQEVPKTNPMEEQINNLTAWTETDFISKNLILTGLIEELYDY

A0A5D3CEV3 Uncharacterized protein1.6e-2768.89Show/hide
Query:  MVKQFQGDLMSSNFNQPFHFEGAQFKRWKQKMLFFLILKKVDVACTNEKQEVPKTNPMEEQINNLTAWTETDFISKNLILTGLIEELYDY
        M ++ Q DLMSS+FN+PF FEGA FKRWKQKMLFFL LKKV  ACT EK +V + +P EEQ+ NL  WTETDFI KNLIL GL +ELYDY
Subjt:  MVKQFQGDLMSSNFNQPFHFEGAQFKRWKQKMLFFLILKKVDVACTNEKQEVPKTNPMEEQINNLTAWTETDFISKNLILTGLIEELYDY

A0A5D3DC59 Reverse transcriptase Ty1/copia-type domain-containing protein1.2e-2770Show/hide
Query:  MVKQFQGDLMSSNFNQPFHFEGAQFKRWKQKMLFFLILKKVDVACTNEKQEVPKTNPMEEQINNLTAWTETDFISKNLILTGLIEELYDY
        MV Q Q DLMSS+ N+PF FEGA FKRWKQKMLFFL LKKV  ACT EK +V + +P+EEQ+ NL  WTETDFI KNLIL GL +ELYDY
Subjt:  MVKQFQGDLMSSNFNQPFHFEGAQFKRWKQKMLFFLILKKVDVACTNEKQEVPKTNPMEEQINNLTAWTETDFISKNLILTGLIEELYDY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAAACAATTCCAAGGTGATTTAATGTCCTCTAACTTCAACCAACCTTTTCATTTTGAAGGAGCACAATTCAAAAGATGGAAGCAAAAGATGTTGTTCTTTCTTAT
TTTGAAGAAAGTCGACGTCGCATGTACCAATGAAAAACAAGAGGTTCCAAAAACCAACCCAATGGAGGAGCAAATCAACAATCTTACCGCTTGGACCGAGACAGACTTCA
TCAGTAAGAATTTGATTCTTACTGGTCTTATTGAGGAGTTGTATGATTATAAAGTACCATCACTACTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAAACAATTCCAAGGTGATTTAATGTCCTCTAACTTCAACCAACCTTTTCATTTTGAAGGAGCACAATTCAAAAGATGGAAGCAAAAGATGTTGTTCTTTCTTAT
TTTGAAGAAAGTCGACGTCGCATGTACCAATGAAAAACAAGAGGTTCCAAAAACCAACCCAATGGAGGAGCAAATCAACAATCTTACCGCTTGGACCGAGACAGACTTCA
TCAGTAAGAATTTGATTCTTACTGGTCTTATTGAGGAGTTGTATGATTATAAAGTACCATCACTACTATAA
Protein sequenceShow/hide protein sequence
MVKQFQGDLMSSNFNQPFHFEGAQFKRWKQKMLFFLILKKVDVACTNEKQEVPKTNPMEEQINNLTAWTETDFISKNLILTGLIEELYDYKVPSLL