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IVF0009565 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009565
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 4
Genome locationchr01:19658951..19659446
RNA-Seq ExpressionIVF0009565
SyntenyIVF0009565
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033561.1 uncharacterized protein E6C27_scaffold261G001160 [Cucumis melo var. makuwa]1.87e-5482.24Show/hide
Query:  MSTDRSIPKEIVHKARTNLGVNISYQKTWRAKEHMVKILHSDTVESYALILRFFDKLVESNP------EMDDSGHFKFCFMTFGASIEGWKYCKPIISID
        MS D SIPKEIVHKARTNLGVNISY+K WRAKEHMVKILH DTVESYALI RFFDKLV+SNP      EMDDSGHFKFCFM FGASIEGWKYC+PIIS+D
Subjt:  MSTDRSIPKEIVHKARTNLGVNISYQKTWRAKEHMVKILHSDTVESYALILRFFDKLVESNP------EMDDSGHFKFCFMTFGASIEGWKYCKPIISID

Query:  GTFFTVS
        GTF   S
Subjt:  GTFFTVS

KAA0037812.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]4.97e-5584.47Show/hide
Query:  MSTDRSIPKEIVHKARTNLGVNISYQKTWRAKEHMVKILHSDTVESYALILRFFDKLVESNP------EMDDSGHFKFCFMTFGASIEGWKYCKPIISID
        MST+RSIP EIVHKARTNLG+NISYQK WRAKEHMVKILH DTVESYALI RFFDKLVESNP      EMDDSGHFKFCFM FGASIEGWKYCKPII +D
Subjt:  MSTDRSIPKEIVHKARTNLGVNISYQKTWRAKEHMVKILHSDTVESYALILRFFDKLVESNP------EMDDSGHFKFCFMTFGASIEGWKYCKPIISID

Query:  GTF
        G F
Subjt:  GTF

KAA0041797.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]8.74e-5583.5Show/hide
Query:  MSTDRSIPKEIVHKARTNLGVNISYQKTWRAKEHMVKILHSDTVESYALILRFFDKLVESNP------EMDDSGHFKFCFMTFGASIEGWKYCKPIISID
        MS DRSI KEIVHK RTNLGVNISYQK WRAKEHMVKILH DTVESYALI RFFDKLVESNP      E+DD GHFKFCFM FGASIEGWKYC+PIIS+D
Subjt:  MSTDRSIPKEIVHKARTNLGVNISYQKTWRAKEHMVKILHSDTVESYALILRFFDKLVESNP------EMDDSGHFKFCFMTFGASIEGWKYCKPIISID

Query:  GTF
        GTF
Subjt:  GTF

KAA0050206.1 uncharacterized protein E6C27_scaffold355G00380 [Cucumis melo var. makuwa]2.86e-5583.5Show/hide
Query:  MSTDRSIPKEIVHKARTNLGVNISYQKTWRAKEHMVKILHSDTVESYALILRFFDKLVESNP------EMDDSGHFKFCFMTFGASIEGWKYCKPIISID
        MSTDRSIPKEIVHKART LGV ISYQK WR KEH+VKILH DTVESYALILRFFDKLVESNP      EMDDSGHFKFCFM FGAS+EGWKYC+ IISID
Subjt:  MSTDRSIPKEIVHKARTNLGVNISYQKTWRAKEHMVKILHSDTVESYALILRFFDKLVESNP------EMDDSGHFKFCFMTFGASIEGWKYCKPIISID

Query:  GTF
        G F
Subjt:  GTF

TYK02872.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]5.12e-5684.47Show/hide
Query:  MSTDRSIPKEIVHKARTNLGVNISYQKTWRAKEHMVKILHSDTVESYALILRFFDKLVESNP------EMDDSGHFKFCFMTFGASIEGWKYCKPIISID
        MST+RSIP EIVHKARTNLG+NISYQK WRAKEHMVKILH DTVESYALI RFFDKLVESNP      EMDDSGHFKFCFM FGASIEGWKYCKPII +D
Subjt:  MSTDRSIPKEIVHKARTNLGVNISYQKTWRAKEHMVKILHSDTVESYALILRFFDKLVESNP------EMDDSGHFKFCFMTFGASIEGWKYCKPIISID

Query:  GTF
        G F
Subjt:  GTF

TrEMBL top hitse value%identityAlignment
A0A5A7SVW4 Uncharacterized protein1.1e-4282.24Show/hide
Query:  MSTDRSIPKEIVHKARTNLGVNISYQKTWRAKEHMVKILHSDTVESYALILRFFDKLVESNP------EMDDSGHFKFCFMTFGASIEGWKYCKPIISID
        MS D SIPKEIVHKARTNLGVNISY+K WRAKEHMVKILH DTVESYALI RFFDKLV+SNP      EMDDSGHFKFCFM FGASIEGWKYC+PIIS+D
Subjt:  MSTDRSIPKEIVHKARTNLGVNISYQKTWRAKEHMVKILHSDTVESYALILRFFDKLVESNP------EMDDSGHFKFCFMTFGASIEGWKYCKPIISID

Query:  GTFFTVS
        GTF   S
Subjt:  GTFFTVS

A0A5A7T2W2 Protein FAR1-RELATED SEQUENCE 42.0e-4284.47Show/hide
Query:  MSTDRSIPKEIVHKARTNLGVNISYQKTWRAKEHMVKILHSDTVESYALILRFFDKLVESNP------EMDDSGHFKFCFMTFGASIEGWKYCKPIISID
        MST+RSIP EIVHKARTNLG+NISYQK WRAKEHMVKILH DTVESYALI RFFDKLVESNP      EMDDSGHFKFCFM FGASIEGWKYCKPII +D
Subjt:  MSTDRSIPKEIVHKARTNLGVNISYQKTWRAKEHMVKILHSDTVESYALILRFFDKLVESNP------EMDDSGHFKFCFMTFGASIEGWKYCKPIISID

Query:  GTF
        G F
Subjt:  GTF

A0A5A7U5C2 Protein FAR1-RELATED SEQUENCE 4-like2.6e-4282.24Show/hide
Query:  MSTDRSIPKEIVHKARTNLGVNISYQKTWRAKEHMVKILHSDTVESYALILRFFDKLVESNP------EMDDSGHFKFCFMTFGASIEGWKYCKPIISID
        MSTDRSI KEIVHKARTNLGVNISYQK WR KEHMVKILH DTVESYALI RFFDKLVESNP      EM+DSGHFKFCFM FGASIE WKYC+PIIS+D
Subjt:  MSTDRSIPKEIVHKARTNLGVNISYQKTWRAKEHMVKILHSDTVESYALILRFFDKLVESNP------EMDDSGHFKFCFMTFGASIEGWKYCKPIISID

Query:  GTFFTVS
        GTF   S
Subjt:  GTFFTVS

A0A5D3B9S0 Uncharacterized protein2.0e-4284.47Show/hide
Query:  MSTDRSIPKEIVHKARTNLGVNISYQKTWRAKEHMVKILHSDTVESYALILRFFDKLVESNP------EMDDSGHFKFCFMTFGASIEGWKYCKPIISID
        MS D SIPKEIVHKARTNLGVNISY+K WRAKEHMVKILH DTVESYALI RFFDKLV+SNP      EMDDSGHFKFCFM FGASIEGWKYC+PIIS+D
Subjt:  MSTDRSIPKEIVHKARTNLGVNISYQKTWRAKEHMVKILHSDTVESYALILRFFDKLVESNP------EMDDSGHFKFCFMTFGASIEGWKYCKPIISID

Query:  GTF
        GTF
Subjt:  GTF

A0A5D3BVN2 Protein FAR1-RELATED SEQUENCE 42.0e-4284.47Show/hide
Query:  MSTDRSIPKEIVHKARTNLGVNISYQKTWRAKEHMVKILHSDTVESYALILRFFDKLVESNP------EMDDSGHFKFCFMTFGASIEGWKYCKPIISID
        MST+RSIP EIVHKARTNLG+NISYQK WRAKEHMVKILH DTVESYALI RFFDKLVESNP      EMDDSGHFKFCFM FGASIEGWKYCKPII +D
Subjt:  MSTDRSIPKEIVHKARTNLGVNISYQKTWRAKEHMVKILHSDTVESYALILRFFDKLVESNP------EMDDSGHFKFCFMTFGASIEGWKYCKPIISID

Query:  GTF
        G F
Subjt:  GTF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACTGATCGTTCCATTCCTAAAGAGATTGTGCATAAGGCTCGTACAAATCTTGGAGTTAATATAAGTTACCAAAAAACTTGGAGGGCGAAAGAACATATGGTAAA
GATATTACATAGTGACACAGTTGAATCATATGCATTGATTTTAAGATTTTTTGATAAATTGGTTGAATCTAACCCAGAAATGGATGATAGTGGTCATTTCAAGTTTTGTT
TTATGACTTTTGGTGCATCAATTGAGGGGTGGAAGTATTGTAAACCTATTATTTCTATTGATGGAACATTTTTTACTGTAAGTTTGGTGACATCCTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTACTGATCGTTCCATTCCTAAAGAGATTGTGCATAAGGCTCGTACAAATCTTGGAGTTAATATAAGTTACCAAAAAACTTGGAGGGCGAAAGAACATATGGTAAA
GATATTACATAGTGACACAGTTGAATCATATGCATTGATTTTAAGATTTTTTGATAAATTGGTTGAATCTAACCCAGAAATGGATGATAGTGGTCATTTCAAGTTTTGTT
TTATGACTTTTGGTGCATCAATTGAGGGGTGGAAGTATTGTAAACCTATTATTTCTATTGATGGAACATTTTTTACTGTAAGTTTGGTGACATCCTATTAA
Protein sequenceShow/hide protein sequence
MSTDRSIPKEIVHKARTNLGVNISYQKTWRAKEHMVKILHSDTVESYALILRFFDKLVESNPEMDDSGHFKFCFMTFGASIEGWKYCKPIISIDGTFFTVSLVTSY