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IVF0009595 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009595
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionprotein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1
Genome locationchr09:11905551..11910866
RNA-Seq ExpressionIVF0009595
SyntenyIVF0009595
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0020037 - heme binding (molecular function)
InterPro domainsIPR025452 - Domain of unknown function DUF4218
IPR029480 - Transposase-associated domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055179.1 uncharacterized protein E6C27_scaffold80G00030 [Cucumis melo var. makuwa]6.25e-8347.89Show/hide
Query:  RATDEYMKGAWEFVEKVKKDATDVDLIMCPCKDCRNMSHQSFDVVYEHLVIKRMDPTYKIWY--------------------------HHGEEVCEREEI
        RATDEYMKG WEFVEKVKKDATDVDLIMCP KDCRNMSHQSFDVVYEHLVIK MDPTYKIW                           HH  +    E I
Subjt:  RATDEYMKGAWEFVEKVKKDATDVDLIMCPCKDCRNMSHQSFDVVYEHLVIKRMDPTYKIWY--------------------------HHGEEVCEREEI

Query:  E-----------------DVDMFDVFNMYQSTY------------------EREEV-------------------NNE-----STFSSTNSELHQKMKNA
        +                   D F+ F+   S Y                  ++E +                    N      S F++    +  + K  
Subjt:  E-----------------DVDMFDVFNMYQSTY------------------EREEV-------------------NNE-----STFSSTNSELHQKMKNA

Query:  KVPY-------------------------IPIVQSSQRC---QLRWPYINLKLYMKVLKAYVRNRARPEGCIAEGYLADECVNFSSGFFNELPKFFRKEC
        ++ +                         I + + ++ C   Q RW Y   + YMKVLKAYVRNRARPEGCIAE YLADECVNFSS FFNE P+FFRKEC
Subjt:  KVPY-------------------------IPIVQSSQRC---QLRWPYINLKLYMKVLKAYVRNRARPEGCIAEGYLADECVNFSSGFFNELPKFFRKEC

Query:  RNEELENSVIREGLPISAGISIMMDDDDLENAHRYVLFNTTEIEPFVEYVFKVEA
        RNEELENSVI EG PIS GISI +DDDDL+NAHRYVLFNTTEIEPFVEYVFKVEA
Subjt:  RNEELENSVIREGLPISAGISIMMDDDDLENAHRYVLFNTTEIEPFVEYVFKVEA

KAA0067403.1 hypothetical protein E6C27_scaffold40G00590 [Cucumis melo var. makuwa]3.21e-6789.92Show/hide
Query:  QSSQRCQLRWPYINLKLYMKVLKAYVRNRARPEGCIAEGYLADECVNFSSGFFNELPKFFRKECRNEELENSVIREGLPISAGISIMMDDDDLENAHRYV
        Q  ++ Q RW Y   + YMKVLKAYVRNRARPEGCIAEGYLADECVNFSSGFFNELPKFFRKECRNEELENSVIREGLPISAGISIMMDDDDLENAHRYV
Subjt:  QSSQRCQLRWPYINLKLYMKVLKAYVRNRARPEGCIAEGYLADECVNFSSGFFNELPKFFRKECRNEELENSVIREGLPISAGISIMMDDDDLENAHRYV

Query:  LFNTTEIEPFVEYVFKVEA
        LFNTTEIEPFVEYVFKVEA
Subjt:  LFNTTEIEPFVEYVFKVEA

KGN47253.1 hypothetical protein Csa_017000 [Cucumis sativus]1.89e-4687.06Show/hide
Query:  RATDEYMKGAWEFVEKVKKDATDVDLIMCPCKDCRNMSHQSFDVVYEHLVIKRMDPTYKIWYHHGEEVCEREEIEDVDMFDVFNM
        RATDEYMKGAWEF+EKVKKD T VDLIMCPCKDCR+MSHQSFD+VYEHLVIK MDPTYKI YHHGEEVC +EE+ED DMFDVFNM
Subjt:  RATDEYMKGAWEFVEKVKKDATDVDLIMCPCKDCRNMSHQSFDVVYEHLVIKRMDPTYKIWYHHGEEVCEREEIEDVDMFDVFNM

TYJ96367.1 hypothetical protein E5676_scaffold1159G00290 [Cucumis melo var. makuwa]2.50e-5582.3Show/hide
Query:  QLRWPYINLKLYMKVLKAYVRNRARPEGCIAEGYLADECVNFSSGFFNELPKFFRKECRNEELENSVIREGLPISAGISIMMDDDDLENAHRYVLFNTTE
        Q RW Y   +  MKV KAYVRNRARPEGCI EGYLADECV+FSSGFFNE P+ F KECRNEELEN+VI EG PISA ISIMMDDDDL+NAHRYVLFNTTE
Subjt:  QLRWPYINLKLYMKVLKAYVRNRARPEGCIAEGYLADECVNFSSGFFNELPKFFRKECRNEELENSVIREGLPISAGISIMMDDDDLENAHRYVLFNTTE

Query:  IEPFVEYVFKVEA
        IEPFVEYVFKVEA
Subjt:  IEPFVEYVFKVEA

XP_008452625.1 PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X2 [Cucumis melo]7.80e-3295.45Show/hide
Query:  MPLNFLGLGVGGGCGVGLGLGWGFGTDFGSKYRSSRMIFQGMEFDNKDQNQSYDIKDSKDSSRNSR
        MPLNFLGLG GGGCGVGLGLGWGFGT FGSKYRSSRMIFQGMEFD+KDQNQSYDIKDSKDSSRNSR
Subjt:  MPLNFLGLGVGGGCGVGLGLGWGFGTDFGSKYRSSRMIFQGMEFDNKDQNQSYDIKDSKDSSRNSR

TrEMBL top hitse value%identityAlignment
A0A0A0KCH8 Transpos_assoc domain-containing protein2.2e-3787.06Show/hide
Query:  RATDEYMKGAWEFVEKVKKDATDVDLIMCPCKDCRNMSHQSFDVVYEHLVIKRMDPTYKIWYHHGEEVCEREEIEDVDMFDVFNM
        RATDEYMKGAWEF+EKVKKD T VDLIMCPCKDCR+MSHQSFD+VYEHLVIK MDPTYKI YHHGEEVC +EE+ED DMFDVFNM
Subjt:  RATDEYMKGAWEFVEKVKKDATDVDLIMCPCKDCRNMSHQSFDVVYEHLVIKRMDPTYKIWYHHGEEVCEREEIEDVDMFDVFNM

A0A5A7T672 Uncharacterized protein2.4e-2862.26Show/hide
Query:  QLRWPYINLKLYMKVLKAYVRNRARPEGCIAEGYLADECVNFSSGFFNELPKFFRKECRNEELENSVIREGLPISAGISIMMDDDDLENAHRYVLFNTTE
        Q RW Y   + YMKVLK YVRN+ARPEGCIA  YLADECV+FS+ +F +  +    + RNEE +N VI EG PIS+G SI + DD LENAHRYVLFNT+E
Subjt:  QLRWPYINLKLYMKVLKAYVRNRARPEGCIAEGYLADECVNFSSGFFNELPKFFRKECRNEELENSVIREGLPISAGISIMMDDDDLENAHRYVLFNTTE

Query:  IEPFVE
        +EPF+E
Subjt:  IEPFVE

A0A5A7T672 Uncharacterized protein5.1e-1044.83Show/hide
Query:  MSHQSFDVVYEHLVIKRMDPTYKIWYHHGEEVCEREEIE----DVDMFDVFNMYQSTY-EREEVNNESTFSSTNSELHQKMKNAKVP
        M+H  F ++YEHLVIK MDPTY  WYHHG EVCE +E+E    D  M +  N Y+STY  +E++ ++++ S   ++  QK++ A  P
Subjt:  MSHQSFDVVYEHLVIKRMDPTYKIWYHHGEEVCEREEIE----DVDMFDVFNMYQSTY-EREEVNNESTFSSTNSELHQKMKNAKVP

A0A5A7UNZ2 Uncharacterized protein1.9e-6847.89Show/hide
Query:  RATDEYMKGAWEFVEKVKKDATDVDLIMCPCKDCRNMSHQSFDVVYEHLVIKRMDPTYKIW--------------------------YHHGEEVCEREEI
        RATDEYMKG WEFVEKVKKDATDVDLIMCP KDCRNMSHQSFDVVYEHLVIK MDPTYKIW                           HH  +    E I
Subjt:  RATDEYMKGAWEFVEKVKKDATDVDLIMCPCKDCRNMSHQSFDVVYEHLVIKRMDPTYKIW--------------------------YHHGEEVCEREEI

Query:  E-----------------DVDMFDVFNMYQSTY------------------EREEV-------------------NNE-----STFSSTNSELHQKMKNA
        +                   D F+ F+   S Y                  ++E +                    N      S F++    +  + K  
Subjt:  E-----------------DVDMFDVFNMYQSTY------------------EREEV-------------------NNE-----STFSSTNSELHQKMKNA

Query:  KVPY-------------------------IPIVQSSQRC---QLRWPYINLKLYMKVLKAYVRNRARPEGCIAEGYLADECVNFSSGFFNELPKFFRKEC
        ++ +                         I + + ++ C   Q RW Y   + YMKVLKAYVRNRARPEGCIAE YLADECVNFSS FFNE P+FFRKEC
Subjt:  KVPY-------------------------IPIVQSSQRC---QLRWPYINLKLYMKVLKAYVRNRARPEGCIAEGYLADECVNFSSGFFNELPKFFRKEC

Query:  RNEELENSVIREGLPISAGISIMMDDDDLENAHRYVLFNTTEIEPFVEYVFKVEA
        RNEELENSVI EG PIS GISI +DDDDL+NAHRYVLFNTTEIEPFVEYVFKVEA
Subjt:  RNEELENSVIREGLPISAGISIMMDDDDLENAHRYVLFNTTEIEPFVEYVFKVEA

A0A5A7VH29 DUF4218 domain-containing protein6.4e-5389.92Show/hide
Query:  QSSQRCQLRWPYINLKLYMKVLKAYVRNRARPEGCIAEGYLADECVNFSSGFFNELPKFFRKECRNEELENSVIREGLPISAGISIMMDDDDLENAHRYV
        Q  ++ Q RW Y   + YMKVLKAYVRNRARPEGCIAEGYLADECVNFSSGFFNELPKFFRKECRNEELENSVIREGLPISAGISIMMDDDDLENAHRYV
Subjt:  QSSQRCQLRWPYINLKLYMKVLKAYVRNRARPEGCIAEGYLADECVNFSSGFFNELPKFFRKECRNEELENSVIREGLPISAGISIMMDDDDLENAHRYV

Query:  LFNTTEIEPFVEYVFKVEA
        LFNTTEIEPFVEYVFKVEA
Subjt:  LFNTTEIEPFVEYVFKVEA

A0A5D3BB74 DUF4218 domain-containing protein9.3e-4482.3Show/hide
Query:  QLRWPYINLKLYMKVLKAYVRNRARPEGCIAEGYLADECVNFSSGFFNELPKFFRKECRNEELENSVIREGLPISAGISIMMDDDDLENAHRYVLFNTTE
        Q RW Y   +  MKV KAYVRNRARPEGCI EGYLADECV+FSSGFFNE P+ F KECRNEELEN+VI EG PISA ISIMMDDDDL+NAHRYVLFNTTE
Subjt:  QLRWPYINLKLYMKVLKAYVRNRARPEGCIAEGYLADECVNFSSGFFNELPKFFRKECRNEELENSVIREGLPISAGISIMMDDDDLENAHRYVLFNTTE

Query:  IEPFVEYVFKVEA
        IEPFVEYVFKVEA
Subjt:  IEPFVEYVFKVEA

SwissProt top hitse value%identityAlignment
Q8VY77 Protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic1.3e-1361.29Show/hide
Query:  MPLNFLGLGVGGGCGVGLGLGWGFGTDFGSKYRSSRMIFQGMEFDNKDQNQSYDIKDSKDSS
        MP+N LG+G GGGCGVGLGLGWGFGT FGS YRSSR+ FQG+E +  D+ +      SK+S+
Subjt:  MPLNFLGLGVGGGCGVGLGLGWGFGTDFGSKYRSSRMIFQGMEFDNKDQNQSYDIKDSKDSS

Arabidopsis top hitse value%identityAlignment
AT1G27695.1 glycine-rich protein8.9e-1561.29Show/hide
Query:  MPLNFLGLGVGGGCGVGLGLGWGFGTDFGSKYRSSRMIFQGMEFDNKDQNQSYDIKDSKDSS
        MP+N LG+G GGGCGVGLGLGWGFGT FGS YRSSR+ FQG+E +  D+ +      SK+S+
Subjt:  MPLNFLGLGVGGGCGVGLGLGWGFGTDFGSKYRSSRMIFQGMEFDNKDQNQSYDIKDSKDSS

AT1G27695.2 glycine-rich protein8.9e-1561.29Show/hide
Query:  MPLNFLGLGVGGGCGVGLGLGWGFGTDFGSKYRSSRMIFQGMEFDNKDQNQSYDIKDSKDSS
        MP+N LG+G GGGCGVGLGLGWGFGT FGS YRSSR+ FQG+E +  D+ +      SK+S+
Subjt:  MPLNFLGLGVGGGCGVGLGLGWGFGTDFGSKYRSSRMIFQGMEFDNKDQNQSYDIKDSKDSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTTGAACTTCTTGGGCCTTGGCGTGGGTGGTGGGTGTGGCGTTGGATTAGGACTTGGATGGGGATTTGGCACAGATTTCGGGAGTAAGTATCGGTCCTCAAGGAT
GATATTTCAGGGAATGGAATTCGACAACAAGGATCAAAATCAGAGTTATGATATCAAGGACTCGAAAGATTCATCCAGAAATTCCAGACTTATGCATTGTTGGAAGAGTT
TCTTAATCTTTCTAAAGAACTTGGAAGCATTCCGGTTAACAATACAAGAGTTTGTTATTCCATGGAATCATATGTGCTTCAATGCCCCTATGGAAAGACTGGACCCAATT
GTACATGGAACAGATACGTCCTTCAGAGCCACAGACGAGTATATGAAAGGTGCATGGGAGTTTGTGGAGAAAGTAAAGAAGGATGCAACAGATGTGGATTTGATTATGTG
CCCTTGCAAGGATTGTAGAAACATGAGTCATCAATCATTTGATGTTGTTTATGAGCATTTAGTAATTAAGAGAATGGACCCAACATATAAGATTTGGTACCATCATGGTG
AGGAAGTTTGTGAAAGGGAAGAAATTGAGGATGTAGATATGTTTGATGTATTTAACATGTATCAGTCTACATATGAAAGAGAAGAAGTAAATAATGAGTCTACTTTTTCA
AGTACCAATAGTGAACTTCATCAAAAAATGAAGAATGCAAAGGTCCCTTATATCCCAATTGTACAAAGTTCACAAAGATGTCAACTACGGTGGCCTTATATAAACTTAAA
ACTATACATGAAGGTACTCAAAGCATATGTTAGGAATCGAGCAAGACCAGAAGGGTGTATTGCTGAAGGTTATTTAGCAGATGAATGTGTAAACTTTTCAAGTGGGTTTT
TTAATGAGCTGCCAAAATTCTTTCGTAAAGAATGTCGTAATGAAGAATTAGAGAATAGTGTCATTCGTGAAGGTCTTCCAATATCAGCAGGGATATCAATTATGATGGAT
GATGATGACTTAGAGAATGCACATAGATATGTATTATTCAACACTACAGAGATTGAACCGTTTGTTGAGTATGTATTTAAAGTTGAAGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTTGAACTTCTTGGGCCTTGGCGTGGGTGGTGGGTGTGGCGTTGGATTAGGACTTGGATGGGGATTTGGCACAGATTTCGGGAGTAAGTATCGGTCCTCAAGGAT
GATATTTCAGGGAATGGAATTCGACAACAAGGATCAAAATCAGAGTTATGATATCAAGGACTCGAAAGATTCATCCAGAAATTCCAGACTTATGCATTGTTGGAAGAGTT
TCTTAATCTTTCTAAAGAACTTGGAAGCATTCCGGTTAACAATACAAGAGTTTGTTATTCCATGGAATCATATGTGCTTCAATGCCCCTATGGAAAGACTGGACCCAATT
GTACATGGAACAGATACGTCCTTCAGAGCCACAGACGAGTATATGAAAGGTGCATGGGAGTTTGTGGAGAAAGTAAAGAAGGATGCAACAGATGTGGATTTGATTATGTG
CCCTTGCAAGGATTGTAGAAACATGAGTCATCAATCATTTGATGTTGTTTATGAGCATTTAGTAATTAAGAGAATGGACCCAACATATAAGATTTGGTACCATCATGGTG
AGGAAGTTTGTGAAAGGGAAGAAATTGAGGATGTAGATATGTTTGATGTATTTAACATGTATCAGTCTACATATGAAAGAGAAGAAGTAAATAATGAGTCTACTTTTTCA
AGTACCAATAGTGAACTTCATCAAAAAATGAAGAATGCAAAGGTCCCTTATATCCCAATTGTACAAAGTTCACAAAGATGTCAACTACGGTGGCCTTATATAAACTTAAA
ACTATACATGAAGGTACTCAAAGCATATGTTAGGAATCGAGCAAGACCAGAAGGGTGTATTGCTGAAGGTTATTTAGCAGATGAATGTGTAAACTTTTCAAGTGGGTTTT
TTAATGAGCTGCCAAAATTCTTTCGTAAAGAATGTCGTAATGAAGAATTAGAGAATAGTGTCATTCGTGAAGGTCTTCCAATATCAGCAGGGATATCAATTATGATGGAT
GATGATGACTTAGAGAATGCACATAGATATGTATTATTCAACACTACAGAGATTGAACCGTTTGTTGAGTATGTATTTAAAGTTGAAGCCTAA
Protein sequenceShow/hide protein sequence
MPLNFLGLGVGGGCGVGLGLGWGFGTDFGSKYRSSRMIFQGMEFDNKDQNQSYDIKDSKDSSRNSRLMHCWKSFLIFLKNLEAFRLTIQEFVIPWNHMCFNAPMERLDPI
VHGTDTSFRATDEYMKGAWEFVEKVKKDATDVDLIMCPCKDCRNMSHQSFDVVYEHLVIKRMDPTYKIWYHHGEEVCEREEIEDVDMFDVFNMYQSTYEREEVNNESTFS
STNSELHQKMKNAKVPYIPIVQSSQRCQLRWPYINLKLYMKVLKAYVRNRARPEGCIAEGYLADECVNFSSGFFNELPKFFRKECRNEELENSVIREGLPISAGISIMMD
DDDLENAHRYVLFNTTEIEPFVEYVFKVEA