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IVF0009601 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009601
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionran guanine nucleotide release factor
Genome locationchr10:2409122..2413201
RNA-Seq ExpressionIVF0009601
SyntenyIVF0009601
Gene Ontology termsGO:0006606 - protein import into nucleus (biological process)
GO:0050790 - regulation of catalytic activity (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005085 - guanyl-nucleotide exchange factor activity (molecular function)
GO:0031267 - small GTPase binding (molecular function)
InterPro domainsIPR007681 - Ran-interacting Mog1 protein
IPR016123 - Mog1/PsbP, alpha/beta/alpha sandwich


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034408.1 putative ran guanine nucleotide release factor [Cucumis melo var. makuwa]1.96e-6783.82Show/hide
Query:  MSADFSTERPLFGGAIVSTFPLRFQ--------------DVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIE
        MSADFSTERPLFGGAIVSTFPLRFQ              DVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIE
Subjt:  MSADFSTERPLFGGAIVSTFPLRFQ--------------DVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIE

Query:  QSGVIEAPGLCYGNIPTVATTAVGQWQFQ--RAGKE
        QSGVIEAPGLCYGNIPTVATTAVGQ      R G+E
Subjt:  QSGVIEAPGLCYGNIPTVATTAVGQWQFQ--RAGKE

XP_004135179.1 ran guanine nucleotide release factor [Cucumis sativus]5.27e-6890.16Show/hide
Query:  MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGN
        MSADFSTER LFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGS+VIEQSGVIEAP LCYGN
Subjt:  MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGN

Query:  IPTVATTAVGQWQFQ--RAGKE
        IP+VATTAVGQ      R G+E
Subjt:  IPTVATTAVGQWQFQ--RAGKE

XP_008446339.1 PREDICTED: probable ran guanine nucleotide release factor [Cucumis melo]1.18e-7193.44Show/hide
Query:  MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGN
        MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGN
Subjt:  MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGN

Query:  IPTVATTAVGQWQFQ--RAGKE
        IPTVATTAVGQ      R G+E
Subjt:  IPTVATTAVGQWQFQ--RAGKE

XP_022151170.1 probable ran guanine nucleotide release factor [Momordica charantia]1.66e-6484.43Show/hide
Query:  MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGN
        M  DFS+ERPLFGGAIVSTFPLRFQDVSN+RQVPDHQEVFVDPSRDESLIFELLDFKHDVGD+GSAVWFLQDLA+EQDAEG+MVIEQSGVIEAPGLC+GN
Subjt:  MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGN

Query:  IPTVATTAVGQWQFQ--RAGKE
        I +V TTAVGQ      R G+E
Subjt:  IPTVATTAVGQWQFQ--RAGKE

XP_038892350.1 ran guanine nucleotide release factor [Benincasa hispida]5.79e-6586.07Show/hide
Query:  MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGN
        M ADF +ER LFGGAIVSTFPLRFQDVSN+RQVPDHQEVFVDPSRDESLIFELLDFKHDV DNGSAVWFLQDLATEQDAEGS+VIEQSGVIEAPGLCYGN
Subjt:  MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGN

Query:  IPTVATTAVGQWQFQ--RAGKE
        IP+V TTAVGQ      R G+E
Subjt:  IPTVATTAVGQWQFQ--RAGKE

TrEMBL top hitse value%identityAlignment
A0A0A0KU01 Uncharacterized protein1.5e-5390.16Show/hide
Query:  MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGN
        MSADFSTER LFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGS+VIEQSGVIEAP LCYGN
Subjt:  MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGN

Query:  IPTVATTAVGQWQFQ--RAGKE
        IP+VATTAVGQ      R G+E
Subjt:  IPTVATTAVGQWQFQ--RAGKE

A0A1S3BEU3 probable ran guanine nucleotide release factor2.5e-5693.44Show/hide
Query:  MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGN
        MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGN
Subjt:  MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGN

Query:  IPTVATTAVGQWQFQ--RAGKE
        IPTVATTAVGQ      R G+E
Subjt:  IPTVATTAVGQWQFQ--RAGKE

A0A5A7SUT7 Putative ran guanine nucleotide release factor1.9e-5383.82Show/hide
Query:  MSADFSTERPLFGGAIVSTFPLRFQ--------------DVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIE
        MSADFSTERPLFGGAIVSTFPLRFQ              DVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIE
Subjt:  MSADFSTERPLFGGAIVSTFPLRFQ--------------DVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIE

Query:  QSGVIEAPGLCYGNIPTVATTAVGQWQFQ--RAGKE
        QSGVIEAPGLCYGNIPTVATTAVGQ      R G+E
Subjt:  QSGVIEAPGLCYGNIPTVATTAVGQWQFQ--RAGKE

A0A6J1DAG6 probable ran guanine nucleotide release factor6.9e-5184.43Show/hide
Query:  MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGN
        M  DFS+ERPLFGGAIVSTFPLRFQDVSN+RQVPDHQEVFVDPSRDESLIFELLDFKHDVGD+GSAVWFLQDLA+EQDAEG+MVIEQSGVIEAPGLC+GN
Subjt:  MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGN

Query:  IPTVATTAVGQWQFQ--RAGKE
        I +V TTAVGQ      R G+E
Subjt:  IPTVATTAVGQWQFQ--RAGKE

A0A6J1JJW2 probable ran guanine nucleotide release factor6.9e-5185.25Show/hide
Query:  MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGN
        M+ DFS+ER LFGGAIVSTFPLRFQDVSN+RQVPDHQEVFVDPSRDESLIFELLDFKHDV DNGSAVWFLQDLATEQDAEGS+VIEQSGVIEAPGLCY N
Subjt:  MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGN

Query:  IPTVATTAVGQWQFQ--RAGKE
        IP+V TTAVGQ      R G+E
Subjt:  IPTVATTAVGQWQFQ--RAGKE

SwissProt top hitse value%identityAlignment
A3KPP3 Ran guanine nucleotide release factor6.7e-1143.66Show/hide
Query:  RPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDA
        RPLFGGA+ + FP    D+S +RQ+PD+QEVF     D+S+I ELL+++  V D  +A +  +D+A    A
Subjt:  RPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDA

Q32PE2 Ran guanine nucleotide release factor8.2e-0942.86Show/hide
Query:  ERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMV
        + PLFGGA  +T P    DVS++R VPDHQEVF     D+SLI ELL+ +  V    +A +  +D+   Q+A    V
Subjt:  ERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMV

Q54ML6 Probable ran guanine nucleotide release factor1.2e-0744.78Show/hide
Query:  MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAV
        MS  F  +R L+GGAI    P RF DV++ R +PDHQE+F D   D+S+I EL +F+  +  N +A+
Subjt:  MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAV

Q9HD47 Ran guanine nucleotide release factor2.4e-0844.29Show/hide
Query:  PLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDA
        PLFGGA  +  P+   DVS++R VPD+QEVF  P  D+SLI ELL+ +  V    +A +  +D+   Q A
Subjt:  PLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDA

Q9JIB0 Ran guanine nucleotide release factor2.4e-0842.11Show/hide
Query:  PLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVI
        PLFGGA  +  P    DVS++R VPD+QEVF  P  D+SLI ELL+ +  V    +A +  +D+   Q A    V+
Subjt:  PLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVI

Arabidopsis top hitse value%identityAlignment
AT1G69680.1 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein1.2e-4270.49Show/hide
Query:  MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGN
        MS +  + RPLFGGAI + FP RFQDVSN+RQVPDHQEVFVDPSRDESLIFELLDFK +VGD GSA WFL DLA+EQDAEG  +IEQS VIEAPGL + N
Subjt:  MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGN

Query:  IPTVATTAVGQWQFQ--RAGKE
        I  VATTA+G+      R G+E
Subjt:  IPTVATTAVGQWQFQ--RAGKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCAGATTTCTCTACAGAGCGTCCTCTGTTCGGCGGCGCTATAGTTAGCACATTTCCTCTTAGATTCCAGGATGTGAGCAACGTTCGACAAGTTCCTGATCATCA
GGAAGTGTTTGTGGATCCATCTCGGGATGAAAGCTTGATCTTTGAGCTTCTAGATTTTAAGCATGATGTTGGTGACAATGGAAGTGCTGTTTGGTTCCTTCAAGACCTTG
CCACTGAGCAGGATGCTGAGGGAAGCATGGTGATTGAGCAATCTGGGGTGATCGAGGCACCTGGACTGTGTTATGGAAATATACCTACTGTAGCTACAACTGCCGTTGGC
CAATGGCAATTTCAAAGGGCCGGCAAGGAAGAGAAGCTCAAAATATTGTCAGGGTTTATTTGGCAAATCTACGTCTCAAGGGAGTTGGTACAGATGTGCTAA
mRNA sequenceShow/hide mRNA sequence
GCTGGGGTCTCCTATATAAACCGGCCGCGGCCTTCAGAAACTTCCACACCAACGGTGAAGTTTCGTACTTCGATACAAAGGTAAAATTAGTTATTCTTTTTGTAAACAAG
AATATTTGTCTTCTCTTTGATTGTTTTCAAAACATTCTGCGTTATCATCTTCCAATGTTGTAGGAGACTTTTGGGTGTTGGTTAACATGTCGGCAGATTTCTCTACAGAG
CGTCCTCTGTTCGGCGGCGCTATAGTTAGCACATTTCCTCTTAGATTCCAGGATGTGAGCAACGTTCGACAAGTTCCTGATCATCAGGAAGTGTTTGTGGATCCATCTCG
GGATGAAAGCTTGATCTTTGAGCTTCTAGATTTTAAGCATGATGTTGGTGACAATGGAAGTGCTGTTTGGTTCCTTCAAGACCTTGCCACTGAGCAGGATGCTGAGGGAA
GCATGGTGATTGAGCAATCTGGGGTGATCGAGGCACCTGGACTGTGTTATGGAAATATACCTACTGTAGCTACAACTGCCGTTGGCCAATGGCAATTTCAAAGGGCCGGC
AAGGAAGAGAAGCTCAAAATATTGTCAGGGTTTATTTGGCAAATCTACGTCTCAAGGGAGTTGGTACAGATGTGCTAATCTCTGCATATGAACCCATTGTCATAAATCCT
TTGAGCGAAAGTGCTAGCTCTGTCGGCTCTGGTTTGACCACTCCTGCCTCACACTCAGGTTACATTCCAATGCCTGAGGTATTCAAGCTTGCAGTCTCTAGCTTTAAAGT
ATGTGACTGGAGCCTTTTCGGTGCGCCTGCCTAACCTAGGAGATAGGATCAGCGTTTGTTCATTGTTATTTCATTAGTATGTTATGTTACATTGGCAATGTTCCCTGCTG
CTCTCTTGAGTCGGAAATTGTTTGTAGAGGTTGTAGAGCTGTTCGTTGTTGTTGGGTCTTGATTTTCAATCTACGGAAAAGTTGAAGATATGAAGTAATAGCATATGTGA
ATGGTAGAAGTGCCCTTTAAGGTGGACAAAATAGAACAAGCATTAGCTGTTTGTAGTAGGACCCCATATTTTTGAATCAGTCAATCACGTGGCAAACAAAAGGTTTGAAT
ATTAAACCGTGACTGACTGGCCATATTATGTAGTCTAGTTTGTGTTTTCACACATGCAATGGTGACCTTTTCTTGGGGGAAAAAAAAAGAAAGAAATTATTGGTGGACGT
TTTACATCAAATTATTGTCTAATCTTCTAATAATTGCGAAAGGCAC
Protein sequenceShow/hide protein sequence
MSADFSTERPLFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAVWFLQDLATEQDAEGSMVIEQSGVIEAPGLCYGNIPTVATTAVG
QWQFQRAGKEEKLKILSGFIWQIYVSRELVQMC