CuGenDBv2

Gene ID	IVF0009650
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Zinc finger BED domain-containing protein RICESLEEPER 2-like
Genome location	chr08:18570555..18570743
RNA-Seq Expression	IVF0009650
Synteny	IVF0009650
Gene Ontology terms	GO:0009791 - post-embryonic development (biological process) GO:0005634 - nucleus (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003677 - DNA binding (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0050616.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]

1.77e-12

77.36

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Query:  MESSSGQHSETSHSPKPGPAPSINNAIGTVSSSKPPLSDKKKAITTKKTTSNV
        ME+SSGQHSETS S  P PAPS NNA GTVSSSKPPL DKKK   TKKTTS V
Subjt:  MESSSGQHSETSHSPKPGPAPSINNAIGTVSSSKPPLSDKKKAITTKKTTSNV

KAA0051113.1 gag-pol polyprotein [Cucumis melo var. makuwa]

6.19e-13

77.36

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Query:  MESSSGQHSETSHSPKPGPAPSINNAIGTVSSSKPPLSDKKKAITTKKTTSNV
        ME+SSGQHSETS S  P PAPS NNA GTVSSSKPPL DKKK   TKKTTS V
Subjt:  MESSSGQHSETSHSPKPGPAPSINNAIGTVSSSKPPLSDKKKAITTKKTTSNV

KAA0065439.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]

1.76e-12

77.36

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Query:  MESSSGQHSETSHSPKPGPAPSINNAIGTVSSSKPPLSDKKKAITTKKTTSNV
        ME+SSGQHSETS S  P PAPS NNA GTVSSSKPPL DKKK   TKKTTS V
Subjt:  MESSSGQHSETSHSPKPGPAPSINNAIGTVSSSKPPLSDKKKAITTKKTTSNV

TYK02703.1 gag-pol polyprotein [Cucumis melo var. makuwa]

3.90e-13

77.36

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Query:  MESSSGQHSETSHSPKPGPAPSINNAIGTVSSSKPPLSDKKKAITTKKTTSNV
        ME+SSGQHSETS S  P PAPS NNA GTVSSSKPPL DKKK   TKKTTS V
Subjt:  MESSSGQHSETSHSPKPGPAPSINNAIGTVSSSKPPLSDKKKAITTKKTTSNV

TYK08901.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]

4.28e-13

77.36

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Query:  MESSSGQHSETSHSPKPGPAPSINNAIGTVSSSKPPLSDKKKAITTKKTTSNV
        ME+SSGQHSETS S  P PAPS NNA GTVSSSKPPL DKKK   TKKTTS V
Subjt:  MESSSGQHSETSHSPKPGPAPSINNAIGTVSSSKPPLSDKKKAITTKKTTSNV

TrEMBL top hits

e value

%identity

Alignment

A0A5A7U5G1 Gag-pol polyprotein

9.8e-10

77.36

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Query:  MESSSGQHSETSHSPKPGPAPSINNAIGTVSSSKPPLSDKKKAITTKKTTSNV
        ME+SSGQHSETS S  P PAPS NNA GTVSSSKPPL DKKK   TKKTTS V
Subjt:  MESSSGQHSETSHSPKPGPAPSINNAIGTVSSSKPPLSDKKKAITTKKTTSNV

A0A5A7U8W5 Zinc finger BED domain-containing protein RICESLEEPER 2-like

9.8e-10

77.36

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Query:  MESSSGQHSETSHSPKPGPAPSINNAIGTVSSSKPPLSDKKKAITTKKTTSNV
        ME+SSGQHSETS S  P PAPS NNA GTVSSSKPPL DKKK   TKKTTS V
Subjt:  MESSSGQHSETSHSPKPGPAPSINNAIGTVSSSKPPLSDKKKAITTKKTTSNV

A0A5A7VIJ7 Zinc finger BED domain-containing protein RICESLEEPER 2-like

9.8e-10

77.36

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Query:  MESSSGQHSETSHSPKPGPAPSINNAIGTVSSSKPPLSDKKKAITTKKTTSNV
        ME+SSGQHSETS S  P PAPS NNA GTVSSSKPPL DKKK   TKKTTS V
Subjt:  MESSSGQHSETSHSPKPGPAPSINNAIGTVSSSKPPLSDKKKAITTKKTTSNV

A0A5D3C9B8 Zinc finger BED domain-containing protein RICESLEEPER 2-like

9.8e-10

77.36

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Query:  MESSSGQHSETSHSPKPGPAPSINNAIGTVSSSKPPLSDKKKAITTKKTTSNV
        ME+SSGQHSETS S  P PAPS NNA GTVSSSKPPL DKKK   TKKTTS V
Subjt:  MESSSGQHSETSHSPKPGPAPSINNAIGTVSSSKPPLSDKKKAITTKKTTSNV

A0A5D3CAM1 Zinc finger BED domain-containing protein RICESLEEPER 2-like

9.8e-10

77.36

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Query:  MESSSGQHSETSHSPKPGPAPSINNAIGTVSSSKPPLSDKKKAITTKKTTSNV
        ME+SSGQHSETS S  P PAPS NNA GTVSSSKPPL DKKK   TKKTTS V
Subjt:  MESSSGQHSETSHSPKPGPAPSINNAIGTVSSSKPPLSDKKKAITTKKTTSNV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGAGAGCAGTAGTGGACAACATAGTGAAACTAGTCATAGTCCTAAACCTGGTCCTGCCCCTTCCATTAATAACGCAATAGGAACTGTGAGTTCAAGTAAACCACCACT
ATCAGATAAGAAGAAAGCTATAACCACTAAGAAGACAACTTCTAATGTATTGGGATCACTTCACAAAGTTGGAAGATAA

mRNA sequence

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ATGGAGAGCAGTAGTGGACAACATAGTGAAACTAGTCATAGTCCTAAACCTGGTCCTGCCCCTTCCATTAATAACGCAATAGGAACTGTGAGTTCAAGTAAACCACCACT
ATCAGATAAGAAGAAAGCTATAACCACTAAGAAGACAACTTCTAATGTATTGGGATCACTTCACAAAGTTGGAAGATAA

Protein sequence

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MESSSGQHSETSHSPKPGPAPSINNAIGTVSSSKPPLSDKKKAITTKKTTSNVLGSLHKVGR

IVF0009650 (gene) of Melon (IVF77) v1 genome