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IVF0009697 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009697
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr04:16048892..16049261
RNA-Seq ExpressionIVF0009697
SyntenyIVF0009697
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031667.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.76e-3281.82Show/hide
Query:  MTATLEEEIKEHKDESDSSKSDRHWKRPLKKAKSPLNVHLEGFIELDNDESLTGPYAVDLTIEEVGTAKTPVSKPAE
        M ATL+EEI EHKDESDSSKSD HWKR LKKAKSPLN HLEG +ELDNDESL GP+ VD TIE VGT+KTPVSKPAE
Subjt:  MTATLEEEIKEHKDESDSSKSDRHWKRPLKKAKSPLNVHLEGFIELDNDESLTGPYAVDLTIEEVGTAKTPVSKPAE

KAA0034034.1 hypothetical protein E6C27_scaffold65G00180 [Cucumis melo var. makuwa]4.59e-3079.49Show/hide
Query:  MTATLEEEIKEHKDESDSSKSDRHWKRPLKKAK-SPLNVHLEGFIELDNDESLTGPYAVDLTIEEVGTAKTPVSKPAE
        M ATLEEE KE KDESDSSKSDRHWKR LKKAK S LN HLEG IELDNDESLTGP+AVD + ++VGT KTPVSKPA+
Subjt:  MTATLEEEIKEHKDESDSSKSDRHWKRPLKKAK-SPLNVHLEGFIELDNDESLTGPYAVDLTIEEVGTAKTPVSKPAE

KAA0044959.1 hypothetical protein E6C27_scaffold74G002650 [Cucumis melo var. makuwa]2.37e-3379.22Show/hide
Query:  MTATLEEEIKEHKDESDSSKSDRHWKRPLKKAKSPLNVHLEGFIELDNDESLTGPYAVDLTIEEVGTAKTPVSKPAE
        MT TLEEE+KEHKDESDS+KSDRHWKRPLKKAKSPLN HLEG IEL +DESLTGP+ VD   EEVGT+KTPV+K A+
Subjt:  MTATLEEEIKEHKDESDSSKSDRHWKRPLKKAKSPLNVHLEGFIELDNDESLTGPYAVDLTIEEVGTAKTPVSKPAE

KAA0048242.1 hypothetical protein E6C27_scaffold63G001580 [Cucumis melo var. makuwa]5.14e-3065.66Show/hide
Query:  MTATLEEEIKEHKDESDSSKSDRHWKRPLKKAK----------------------SPLNVHLEGFIELDNDESLTGPYAVDLTIEEVGTAKTPVSKPAE
        M ATLEEEIKEHKDESDSSKSD HWKRPLKKAK                      SPLN HLEG IELD++ESL GP+ VD TIEEVGT+KTPVSKP E
Subjt:  MTATLEEEIKEHKDESDSSKSDRHWKRPLKKAK----------------------SPLNVHLEGFIELDNDESLTGPYAVDLTIEEVGTAKTPVSKPAE

KAA0051153.1 hypothetical protein E6C27_scaffold511G001060 [Cucumis melo var. makuwa]2.33e-3278.57Show/hide
Query:  MTATLEEEIKEHKDESDSSKSDRHWKRPLKKAK------------------SPLNVHLEGFIELDNDESLTGPYAVDLTIEEVG
        MTATLEEEIKEHKDESDSSKSDRHWKRPLKKAK                  SPLNVHLEGFIELDNDESLTGPYAVDLTIEEVG
Subjt:  MTATLEEEIKEHKDESDSSKSDRHWKRPLKKAK------------------SPLNVHLEGFIELDNDESLTGPYAVDLTIEEVG

TrEMBL top hitse value%identityAlignment
A0A5A7TUP1 Uncharacterized protein6.0e-2579.22Show/hide
Query:  MTATLEEEIKEHKDESDSSKSDRHWKRPLKKAKSPLNVHLEGFIELDNDESLTGPYAVDLTIEEVGTAKTPVSKPAE
        MT TLEEE+KEHKDESDS+KSDRHWKRPLKKAKSPLN HLEG IEL +DESLTGP+ VD   EEVGT+KTPV+K A+
Subjt:  MTATLEEEIKEHKDESDSSKSDRHWKRPLKKAKSPLNVHLEGFIELDNDESLTGPYAVDLTIEEVGTAKTPVSKPAE

A0A5D3BCT1 Uncharacterized protein3.3e-2365.66Show/hide
Query:  MTATLEEEIKEHKDESDSSKSDRHWKRPLKKAK----------------------SPLNVHLEGFIELDNDESLTGPYAVDLTIEEVGTAKTPVSKPAE
        M ATL+EEIKEHKDESDSSKSDRHWKRPLKKAK                      SPLN HLEG +ELD+D+SLTGPYAVD TIE VGT KT VSKP E
Subjt:  MTATLEEEIKEHKDESDSSKSDRHWKRPLKKAK----------------------SPLNVHLEGFIELDNDESLTGPYAVDLTIEEVGTAKTPVSKPAE

A0A5D3BZM5 Putative mitochondrial protein5.4e-2681.82Show/hide
Query:  MTATLEEEIKEHKDESDSSKSDRHWKRPLKKAKSPLNVHLEGFIELDNDESLTGPYAVDLTIEEVGTAKTPVSKPAE
        M ATL+EEI EHKDESDSSKSD HWKR LKKAKSPLN HLEG +ELDNDESL GP+ VD TIE VGT+KTPVSKPAE
Subjt:  MTATLEEEIKEHKDESDSSKSDRHWKRPLKKAKSPLNVHLEGFIELDNDESLTGPYAVDLTIEEVGTAKTPVSKPAE

A0A5D3BZW1 Uncharacterized protein1.7e-2478.57Show/hide
Query:  MTATLEEEIKEHKDESDSSKSDRHWKRPLKKAK------------------SPLNVHLEGFIELDNDESLTGPYAVDLTIEEVG
        MTATLEEEIKEHKDESDSSKSDRHWKRPLKKAK                  SPLNVHLEGFIELDNDESLTGPYAVDLTIEEVG
Subjt:  MTATLEEEIKEHKDESDSSKSDRHWKRPLKKAK------------------SPLNVHLEGFIELDNDESLTGPYAVDLTIEEVG

A0A5D3D2A0 PMD domain-containing protein5.1e-2469.57Show/hide
Query:  MTATLEEEIKEHKDESDSSKSDRHWKRPLKKAK---------------SPLNVHLEGFIELDNDESLTGPYAVDLTIEEVGTAKTPVSKPAE
        M ATLEEEI EHKDE+DSSKSDRHWKRPLKKAK               SPLN HLEG +ELDNDESLTGP+ VD TIE V T+KTPVSKP E
Subjt:  MTATLEEEIKEHKDESDSSKSDRHWKRPLKKAK---------------SPLNVHLEGFIELDNDESLTGPYAVDLTIEEVGTAKTPVSKPAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGCTACTCTCGAAGAGGAGATAAAGGAGCATAAAGATGAGAGTGATAGTAGCAAAAGTGATCGTCATTGGAAGAGACCTTTGAAGAAAGCAAAGTCACCTTTGAA
CGTTCATCTTGAAGGCTTTATAGAACTAGACAACGATGAATCTTTGACGGGACCTTATGCAGTTGATTTAACCATTGAGGAAGTTGGTACCGCGAAGACTCCCGTCTCTA
AACCAGCCGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGACTGCTACTCTCGAAGAGGAGATAAAGGAGCATAAAGATGAGAGTGATAGTAGCAAAAGTGATCGTCATTGGAAGAGACCTTTGAAGAAAGCAAAGTCACCTTTGAA
CGTTCATCTTGAAGGCTTTATAGAACTAGACAACGATGAATCTTTGACGGGACCTTATGCAGTTGATTTAACCATTGAGGAAGTTGGTACCGCGAAGACTCCCGTCTCTA
AACCAGCCGAATAA
Protein sequenceShow/hide protein sequence
MTATLEEEIKEHKDESDSSKSDRHWKRPLKKAKSPLNVHLEGFIELDNDESLTGPYAVDLTIEEVGTAKTPVSKPAE