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IVF0009703 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009703
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr02:3067323..3067752
RNA-Seq ExpressionIVF0009703
SyntenyIVF0009703
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045008.1 retrotransposon protein [Cucumis melo var. makuwa]6.24e-6577.54Show/hide
Query:  MNKPFPYYDELTYVFGHDRATGRFAETFADVGSNEPGDGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGEVSETSSLKRY-------IWRS
        +NKPFPYYDELTYVFG DRATGRFAETFADVGSNEPG GYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEG    + S ++        +   
Subjt:  MNKPFPYYDELTYVFGHDRATGRFAETFADVGSNEPGDGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGEVSETSSLKRY-------IWRS

Query:  TKQTSNSGRLQSGQHATLQMTTTCARNFSAYCVRCQNL
             NSGRL+SGQHATLQ+TTTCARNFSAYCVRCQNL
Subjt:  TKQTSNSGRLQSGQHATLQMTTTCARNFSAYCVRCQNL

KAA0047893.1 retrotransposon protein [Cucumis melo var. makuwa]6.13e-7282.14Show/hide
Query:  MNKPFPYYDELTYVFGHDRATGRFAETFADVGSNEPGDGYDRFDMGDGNEDFPPVYSQGVDISQDD---------VRASRPSRASEGEVSETSSLKRYIW
        +NKPFPYYDELTYVFG DRA GRFAETFADVGSNEPG GYDRFDMGDGNEDF PVYSQGVDISQDD         V   +  R   GEV+ETSSLKRYIW
Subjt:  MNKPFPYYDELTYVFGHDRATGRFAETFADVGSNEPGDGYDRFDMGDGNEDFPPVYSQGVDISQDD---------VRASRPSRASEGEVSETSSLKRYIW

Query:  RSTKQTSNSGRLQSGQHATLQMTTTCARNFSAYCVRCQNL
        RSTKQTSNSGRL+SGQHATLQMTTTCARNFSAYCVRCQNL
Subjt:  RSTKQTSNSGRLQSGQHATLQMTTTCARNFSAYCVRCQNL

KAA0048405.1 retrotransposon protein [Cucumis melo var. makuwa]1.54e-5669.72Show/hide
Query:  MNKPFPYYDELTYVFGHDRATGRFAETFADVGSNEPGDGYDRFDMGDGNEDFPPVYSQGVD-----------ISQDDVRASRPSRASEGEVSETSSLKRY
        +NKPFPYYDELTYVFG DRATGRFAETFADVGSNEPG GYDRFDMG   +   P  ++ +            ++   V + +  R   GEVSETSSLKRY
Subjt:  MNKPFPYYDELTYVFGHDRATGRFAETFADVGSNEPGDGYDRFDMGDGNEDFPPVYSQGVD-----------ISQDDVRASRPSRASEGEVSETSSLKRY

Query:  IWRSTKQTSNSGRLQSGQHATLQMTTTCARNFSAYCVRCQNL
        IWRSTKQTSNSGRL+SGQHATLQMTTTCARNFSAYCVRCQNL
Subjt:  IWRSTKQTSNSGRLQSGQHATLQMTTTCARNFSAYCVRCQNL

KAA0053666.1 retrotransposon protein [Cucumis melo var. makuwa]2.05e-6174.65Show/hide
Query:  MNKPFPYYDELTYVFGHDRATGRFAETFADVGSNEPGDGYDRFDMGDGNEDFPPVYSQGVD-----------ISQDDVRASRPSRASEGEVSETSSLKRY
        +NKPFPYYDELTYVFG DRATGRFAETFADVGSNEPG GYDRFDMGDGNEDFPPV ++ +            ++   V   +  R   GEVSETSSLKRY
Subjt:  MNKPFPYYDELTYVFGHDRATGRFAETFADVGSNEPGDGYDRFDMGDGNEDFPPVYSQGVD-----------ISQDDVRASRPSRASEGEVSETSSLKRY

Query:  IWRSTKQTSNSGRLQSGQHATLQMTTTCARNFSAYCVRCQNL
        IWRSTKQTSNSGRL+SGQHATLQ+TTTCARNFSAYCVRCQNL
Subjt:  IWRSTKQTSNSGRLQSGQHATLQMTTTCARNFSAYCVRCQNL

TYJ97579.1 retrotransposon protein [Cucumis melo var. makuwa]5.34e-7584.89Show/hide
Query:  MNKPFPYYDELTYVFGHDRATGRFAETFADVGSNEPGDGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGEVSETSS--------LKRYIWR
        MNKPFPYYDELTYVFG +RATGRFAETFADVGSNEP   YDRFDMGDGNEDFPPVYSQGVDISQD+VRASRPSRASEG    + S        LKRYIWR
Subjt:  MNKPFPYYDELTYVFGHDRATGRFAETFADVGSNEPGDGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGEVSETSS--------LKRYIWR

Query:  STKQTSNSGRLQSGQHATLQMTTTCARNFSAYCVRCQNL
        STKQTSNSGRL+SGQHATLQMTTTCARNFSAYCVRCQNL
Subjt:  STKQTSNSGRLQSGQHATLQMTTTCARNFSAYCVRCQNL

TrEMBL top hitse value%identityAlignment
A0A5A7TQ37 Retrotransposon protein4.9e-5177.54Show/hide
Query:  MNKPFPYYDELTYVFGHDRATGRFAETFADVGSNEPGDGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGEVSETSSLKRY-------IWRS
        +NKPFPYYDELTYVFG DRATGRFAETFADVGSNEPG GYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEG    + S ++        +   
Subjt:  MNKPFPYYDELTYVFGHDRATGRFAETFADVGSNEPGDGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGEVSETSSLKRY-------IWRS

Query:  TKQTSNSGRLQSGQHATLQMTTTCARNFSAYCVRCQNL
             NSGRL+SGQHATLQ+TTTCARNFSAYCVRCQNL
Subjt:  TKQTSNSGRLQSGQHATLQMTTTCARNFSAYCVRCQNL

A0A5A7TWD3 Retrotransposon protein6.5e-5682.14Show/hide
Query:  MNKPFPYYDELTYVFGHDRATGRFAETFADVGSNEPGDGYDRFDMGDGNEDFPPVYSQGVDISQDD---------VRASRPSRASEGEVSETSSLKRYIW
        +NKPFPYYDELTYVFG DRA GRFAETFADVGSNEPG GYDRFDMGDGNEDF PVYSQGVDISQDD         V   +  R   GEV+ETSSLKRYIW
Subjt:  MNKPFPYYDELTYVFGHDRATGRFAETFADVGSNEPGDGYDRFDMGDGNEDFPPVYSQGVDISQDD---------VRASRPSRASEGEVSETSSLKRYIW

Query:  RSTKQTSNSGRLQSGQHATLQMTTTCARNFSAYCVRCQNL
        RSTKQTSNSGRL+SGQHATLQMTTTCARNFSAYCVRCQNL
Subjt:  RSTKQTSNSGRLQSGQHATLQMTTTCARNFSAYCVRCQNL

A0A5A7U437 Retrotransposon protein2.0e-4470.42Show/hide
Query:  MNKPFPYYDELTYVFGHDRATGRFAETFADVGSNEPGDGYDRFDMGDGNEDFPP-----------VYSQGVDISQDDVRASRPSRASEGEVSETSSLKRY
        +NKPFPYYDELTYVFG DRATGRFAETFADVGSNEPG GYDRFDMG   +   P           +Y     ++   V + +  R   GEVSETSSLKRY
Subjt:  MNKPFPYYDELTYVFGHDRATGRFAETFADVGSNEPGDGYDRFDMGDGNEDFPP-----------VYSQGVDISQDDVRASRPSRASEGEVSETSSLKRY

Query:  IWRSTKQTSNSGRLQSGQHATLQMTTTCARNFSAYCVRCQNL
        IWRSTKQTSNSGRL+SGQHATLQMTTTCARNFSAYCVRCQNL
Subjt:  IWRSTKQTSNSGRLQSGQHATLQMTTTCARNFSAYCVRCQNL

A0A5A7UHF7 Retrotransposon protein3.1e-5074.65Show/hide
Query:  MNKPFPYYDELTYVFGHDRATGRFAETFADVGSNEPGDGYDRFDMGDGNEDFPPVYSQGVD-----------ISQDDVRASRPSRASEGEVSETSSLKRY
        +NKPFPYYDELTYVFG DRATGRFAETFADVGSNEPG GYDRFDMGDGNEDFPPV ++ +            ++   V   +  R   GEVSETSSLKRY
Subjt:  MNKPFPYYDELTYVFGHDRATGRFAETFADVGSNEPGDGYDRFDMGDGNEDFPPVYSQGVD-----------ISQDDVRASRPSRASEGEVSETSSLKRY

Query:  IWRSTKQTSNSGRLQSGQHATLQMTTTCARNFSAYCVRCQNL
        IWRSTKQTSNSGRL+SGQHATLQ+TTTCARNFSAYCVRCQNL
Subjt:  IWRSTKQTSNSGRLQSGQHATLQMTTTCARNFSAYCVRCQNL

A0A5D3BEV4 Retrotransposon protein7.0e-5884.89Show/hide
Query:  MNKPFPYYDELTYVFGHDRATGRFAETFADVGSNEPGDGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGEVSETS--------SLKRYIWR
        MNKPFPYYDELTYVFG +RATGRFAETFADVGSNEP   YDRFDMGDGNEDFPPVYSQGVDISQD+VRASRPSRASEG    +         SLKRYIWR
Subjt:  MNKPFPYYDELTYVFGHDRATGRFAETFADVGSNEPGDGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGEVSETS--------SLKRYIWR

Query:  STKQTSNSGRLQSGQHATLQMTTTCARNFSAYCVRCQNL
        STKQTSNSGRL+SGQHATLQMTTTCARNFSAYCVRCQNL
Subjt:  STKQTSNSGRLQSGQHATLQMTTTCARNFSAYCVRCQNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAAACCATTCCCGTATTACGACGAGCTTACATATGTATTTGGTCACGATAGGGCGACCGGTCGGTTCGCTGAGACATTCGCGGACGTGGGGTCTAACGAGCCAGG
TGATGGATATGACAGATTTGATATGGGGGATGGAAACGAGGACTTCCCGCCCGTGTACAGCCAGGGAGTTGACATCTCGCAGGACGATGTACGTGCATCCCGACCTTCTC
GCGCTTCAGAGGGGGAAGTCAGCGAGACTTCGAGCTTGAAGCGATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAGGCAGATTGCAGAGTGGCCAGCACGCAACC
TTGCAAATGACAACCACGTGCGCACGGAATTTTTCCGCATATTGCGTGAGATGCCAGAACTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAACAAACCATTCCCGTATTACGACGAGCTTACATATGTATTTGGTCACGATAGGGCGACCGGTCGGTTCGCTGAGACATTCGCGGACGTGGGGTCTAACGAGCCAGG
TGATGGATATGACAGATTTGATATGGGGGATGGAAACGAGGACTTCCCGCCCGTGTACAGCCAGGGAGTTGACATCTCGCAGGACGATGTACGTGCATCCCGACCTTCTC
GCGCTTCAGAGGGGGAAGTCAGCGAGACTTCGAGCTTGAAGCGATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAGGCAGATTGCAGAGTGGCCAGCACGCAACC
TTGCAAATGACAACCACGTGCGCACGGAATTTTTCCGCATATTGCGTGAGATGCCAGAACTTATGA
Protein sequenceShow/hide protein sequence
MNKPFPYYDELTYVFGHDRATGRFAETFADVGSNEPGDGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGEVSETSSLKRYIWRSTKQTSNSGRLQSGQHAT
LQMTTTCARNFSAYCVRCQNL