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IVF0009739 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009739
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTransposon Ty3-G Gag-Pol polyprotein
Genome locationchr11:11509962..11510165
RNA-Seq ExpressionIVF0009739
SyntenyIVF0009739
Gene Ontology termsGO:0006665 - sphingolipid metabolic process (biological process)
GO:0034641 - cellular nitrogen compound metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016811 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053230.1 pleiotropic drug resistance protein 1-like [Cucumis melo var. makuwa]4.82e-33100Show/hide
Query:  QLKNMLGEHIEVHQLIPYLTETHKWKAILGEVFVGIERMLQRMGGVDQLEGFTSTRSYMGSA
        QLKNMLGEHIEVHQLIPYLTETHKWKAILGEVFVGIERMLQRMGGVDQLEGFTSTRSYMGSA
Subjt:  QLKNMLGEHIEVHQLIPYLTETHKWKAILGEVFVGIERMLQRMGGVDQLEGFTSTRSYMGSA

KAA0062186.1 transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]3.57e-1181.58Show/hide
Query:  MFHVSQLKNMLGEHIEVHQLIPYLTETHKWKAILGEVF
        MFHVSQLK MLGEH EVH+LIPYLTET +WKAI  EVF
Subjt:  MFHVSQLKNMLGEHIEVHQLIPYLTETHKWKAILGEVF

TYJ97626.1 Retrovirus-related Pol polyprotein from transposon 297 family [Cucumis melo var. makuwa]2.92e-3396.83Show/hide
Query:  SQLKNMLGEHIEVHQLIPYLTETHKWKAILGEVFVGIERMLQRMGGVDQLEGFTSTRSYMGSA
         +LKNMLGEHIEVHQLIPYLTETHKWKAILGEVFVGIERMLQRMGGVDQLEGFTSTRSYMGSA
Subjt:  SQLKNMLGEHIEVHQLIPYLTETHKWKAILGEVFVGIERMLQRMGGVDQLEGFTSTRSYMGSA

TYK02489.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]1.73e-1256.67Show/hide
Query:  FHVSQLKNMLGEHIEVHQLIPYLTETHKWKAILGEVFVGIERMLQR--MGGVDQLEGFTS
        FHVSQLK MLGEH +VHQL+PY+ ETH+W+AI  EVF G ++      +G  DQLEG  +
Subjt:  FHVSQLKNMLGEHIEVHQLIPYLTETHKWKAILGEVFVGIERMLQR--MGGVDQLEGFTS

TYK04844.1 transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]1.02e-1184.21Show/hide
Query:  MFHVSQLKNMLGEHIEVHQLIPYLTETHKWKAILGEVF
        MFHVSQLK MLGEH EVHQLIPYLTET +WKAI  EVF
Subjt:  MFHVSQLKNMLGEHIEVHQLIPYLTETHKWKAILGEVF

TrEMBL top hitse value%identityAlignment
A0A5A7UDE4 Pleiotropic drug resistance protein 1-like9.5e-27100Show/hide
Query:  QLKNMLGEHIEVHQLIPYLTETHKWKAILGEVFVGIERMLQRMGGVDQLEGFTSTRSYMGSA
        QLKNMLGEHIEVHQLIPYLTETHKWKAILGEVFVGIERMLQRMGGVDQLEGFTSTRSYMGSA
Subjt:  QLKNMLGEHIEVHQLIPYLTETHKWKAILGEVFVGIERMLQRMGGVDQLEGFTSTRSYMGSA

A0A5A7V6Y3 Transposon Ty3-G Gag-Pol polyprotein3.4e-0881.58Show/hide
Query:  MFHVSQLKNMLGEHIEVHQLIPYLTETHKWKAILGEVF
        MFHVSQLK MLGEH EVH+LIPYLTET +WKAI  EVF
Subjt:  MFHVSQLKNMLGEHIEVHQLIPYLTETHKWKAILGEVF

A0A5D3BEX7 Retrovirus-related Pol polyprotein from transposon 297 family2.8e-2698.39Show/hide
Query:  QLKNMLGEHIEVHQLIPYLTETHKWKAILGEVFVGIERMLQRMGGVDQLEGFTSTRSYMGSA
        +LKNMLGEHIEVHQLIPYLTETHKWKAILGEVFVGIERMLQRMGGVDQLEGFTSTRSYMGSA
Subjt:  QLKNMLGEHIEVHQLIPYLTETHKWKAILGEVFVGIERMLQRMGGVDQLEGFTSTRSYMGSA

A0A5D3BWI8 Transposon Tf2-1 polyprotein isoform X11.2e-0855.74Show/hide
Query:  MFHVSQLKNMLGEHIEVHQLIPYLTETHKWKAILGEVFVGIERMLQR--MGGVDQLEGFTS
        +FHVSQLK MLGEH +VHQL+PY+ ETH+W+AI  EVF G ++      +G  DQLEG  +
Subjt:  MFHVSQLKNMLGEHIEVHQLIPYLTETHKWKAILGEVFVGIERMLQR--MGGVDQLEGFTS

A0A5D3C0Q8 Transposon Ty3-G Gag-Pol polyprotein1.2e-0884.21Show/hide
Query:  MFHVSQLKNMLGEHIEVHQLIPYLTETHKWKAILGEVF
        MFHVSQLK MLGEH EVHQLIPYLTET +WKAI  EVF
Subjt:  MFHVSQLKNMLGEHIEVHQLIPYLTETHKWKAILGEVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCATGTGTCGCAGCTTAAGAATATGCTGGGGGAACATATTGAAGTGCACCAATTGATTCCATATCTTACTGAAACTCATAAGTGGAAGGCTATTCTAGGAGAGGT
ATTTGTGGGTATAGAAAGAATGCTTCAACGGATGGGAGGCGTTGATCAGTTGGAAGGGTTTACCAGCACACGAAGCTATATGGGAAGTGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTCATGTGTCGCAGCTTAAGAATATGCTGGGGGAACATATTGAAGTGCACCAATTGATTCCATATCTTACTGAAACTCATAAGTGGAAGGCTATTCTAGGAGAGGT
ATTTGTGGGTATAGAAAGAATGCTTCAACGGATGGGAGGCGTTGATCAGTTGGAAGGGTTTACCAGCACACGAAGCTATATGGGAAGTGCGTGA
Protein sequenceShow/hide protein sequence
MFHVSQLKNMLGEHIEVHQLIPYLTETHKWKAILGEVFVGIERMLQRMGGVDQLEGFTSTRSYMGSA