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IVF0009752 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009752
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr08:17843226..17845680
RNA-Seq ExpressionIVF0009752
SyntenyIVF0009752
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037872.1 uncharacterized protein E6C27_scaffold36G00360 [Cucumis melo var. makuwa]1.82e-4245Show/hide
Query:  QVTRNVFKNGVPEKMTYPDSFIVPYSIGGIDLGCALSDLGSSINLMSLSILKKLEIEE----SLRW---------------------------------D
        Q T +++KNGV EKMTYP SF VP SI G+DLG  L DLG+SINLM LSI KKL+I+E     +R+                                 D
Subjt:  QVTRNVFKNGVPEKMTYPDSFIVPYSIGGIDLGCALSDLGSSINLMSLSILKKLEIEE----SLRW---------------------------------D

Query:  YCKEEAYY----ELF-STQDELDYILED----------------------VNVASDKKIKSSTEEPPELELNPLPNHLKYAYLGENDTLPAIISAHMDVA
        Y  +E        LF ST   L YI +                       ++  S+K  K S  EP ELEL PLPNHLKY YLGENDTLP IIS H++  
Subjt:  YCKEEAYY----ELF-STQDELDYILED----------------------VNVASDKKIKSSTEEPPELELNPLPNHLKYAYLGENDTLPAIISAHMDVA

Query:  KEKALLNILKHLMKAIGWTLVDIHGISPSYCMYKIKLEEG
        +E+ALLN LK   K IGWTL DI G SPS  M+KIKLEEG
Subjt:  KEKALLNILKHLMKAIGWTLVDIHGISPSYCMYKIKLEEG

KAA0052866.1 uncharacterized protein E6C27_scaffold33G00230 [Cucumis melo var. makuwa]1.33e-5951.53Show/hide
Query:  TRNVFKNGVPEKMTYPDSFIVPYSIGGIDLGCALSDLGSSINLMSLSILKKLEIEES------------------------------------LRWDYCK
        T ++FKNG+PEKMT P SF VP SIG +DLG AL +L  SINLM LSI KKLEI E                                     L W+Y +
Subjt:  TRNVFKNGVPEKMTYPDSFIVPYSIGGIDLGCALSDLGSSINLMSLSILKKLEIEES------------------------------------LRWDYCK

Query:  EEAYYELFSTQ-----DELDYILEDVNVAS--------------DKKIKSSTEEPPELELNPLPNHLKYAYLGENDTLPAIISAHMDVAKEKALLNILKH
        +EAY ELFST+     D+  YIL++VNV S              +KK K S EEPPELEL  LPNHLKY YL ENDTLP  IS H+DVAKEK LLN+LK 
Subjt:  EEAYYELFSTQ-----DELDYILEDVNVAS--------------DKKIKSSTEEPPELELNPLPNHLKYAYLGENDTLPAIISAHMDVAKEKALLNILKH

Query:  LMKAIGWTLVDIHGISPSYCMYKIKLEEG
          K I WTLVDI GIS SYCM+K++LEEG
Subjt:  LMKAIGWTLVDIHGISPSYCMYKIKLEEG

TYJ96947.1 integrase [Cucumis melo var. makuwa]1.04e-3950.52Show/hide
Query:  MTYPDSFIVPYSIGGIDLGCALSDLGSSINLMSLSILKKLEIEE----------------SLRWDYCKEEAYYELFSTQ-----DELDYILEDVNVAS--
        MT   SF+V  SIG + LG +L DLG+SINLM LSI KK +I E                 L+     EE+YY+LF+ +     DE +YILE+VNV S  
Subjt:  MTYPDSFIVPYSIGGIDLGCALSDLGSSINLMSLSILKKLEIEE----------------SLRWDYCKEEAYYELFSTQ-----DELDYILEDVNVAS--

Query:  ------------DKKIKSSTEEPPELELNPLPNHLKYAYLGENDTLPAIISAHMDVAKEKALLNILKHLMKAIGWTLVDIHGISPSYCMYKI
                    +KK KSS EEPPELEL P  NHLKYAYLG NDTL  IIS H+D  +EK LLNILK   KA GWTL DI GISPS    K+
Subjt:  ------------DKKIKSSTEEPPELELNPLPNHLKYAYLGENDTLPAIISAHMDVAKEKALLNILKHLMKAIGWTLVDIHGISPSYCMYKI

TYJ99425.1 uncharacterized protein E5676_scaffold316G00120 [Cucumis melo var. makuwa]5.09e-4757.31Show/hide
Query:  QVTRNVFKNGVPEKMTYPDSFIVPYSIGGIDLGCALSDLGSSINLMSLSILKKLEIEE------SLRWDYCKEEAYYELFSTQ-----DELDYILEDVNV
        Q T N+FKNGVP+KMT P SF +PYSIG +DLG AL +L +++NL+ LSI KKL+I E       L+     EEAYYELFST+     DE DY LE+VN 
Subjt:  QVTRNVFKNGVPEKMTYPDSFIVPYSIGGIDLGCALSDLGSSINLMSLSILKKLEIEE------SLRWDYCKEEAYYELFSTQ-----DELDYILEDVNV

Query:  --------------ASDKKIKSSTEEPPELELNPLPNHLKYAYLGENDTLPAIISAHMDVAKEKALLNILK
                        +KKIK S +EP ELEL PLPNHLKYAYLGENDTLP IISAH+D AKE ALL +LK
Subjt:  --------------ASDKKIKSSTEEPPELELNPLPNHLKYAYLGENDTLPAIISAHMDVAKEKALLNILK

TYK21906.1 prostatic spermine-binding protein-like [Cucumis melo var. makuwa]7.30e-6296.3Show/hide
Query:  ESLRWDYCKEEAYYELFSTQDELDYILEDVNVASDKKIKSSTEEPPELELNPLPNHLKYAYLGENDTLPAIISAHMDVAKEKALLNILKHLMKAIGWTLV
        ESLRWDYCKEEAYYELFSTQDELDYILEDVNVASDKKIKSSTEEPPELELNPLPNHLKYAYLGENDTLPAIISAHMDVAKEKALLNILKHLMKAIGWTLV
Subjt:  ESLRWDYCKEEAYYELFSTQDELDYILEDVNVASDKKIKSSTEEPPELELNPLPNHLKYAYLGENDTLPAIISAHMDVAKEKALLNILKHLMKAIGWTLV

Query:  DIHGISPS
        DIH I+  
Subjt:  DIHGISPS

TrEMBL top hitse value%identityAlignment
A0A5A7UF79 Uncharacterized protein1.2e-4751.53Show/hide
Query:  TRNVFKNGVPEKMTYPDSFIVPYSIGGIDLGCALSDLGSSINLMSLSILKKLEIE------------------------------------ESLRWDYCK
        T ++FKNG+PEKMT P SF VP SIG +DLG AL +L  SINLM LSI KKLEI                                     E L W+Y +
Subjt:  TRNVFKNGVPEKMTYPDSFIVPYSIGGIDLGCALSDLGSSINLMSLSILKKLEIE------------------------------------ESLRWDYCK

Query:  EEAYYELFST-----QDELDYILEDVNVAS--------------DKKIKSSTEEPPELELNPLPNHLKYAYLGENDTLPAIISAHMDVAKEKALLNILKH
        +EAY ELFST     +D+  YIL++VNV S              +KK K S EEPPELEL  LPNHLKY YL ENDTLP  IS H+DVAKEK LLN+LK 
Subjt:  EEAYYELFST-----QDELDYILEDVNVAS--------------DKKIKSSTEEPPELELNPLPNHLKYAYLGENDTLPAIISAHMDVAKEKALLNILKH

Query:  LMKAIGWTLVDIHGISPSYCMYKIKLEEG
          K I WTLVDI GIS SYCM+K++LEEG
Subjt:  LMKAIGWTLVDIHGISPSYCMYKIKLEEG

A0A5D3BCU9 Integrase3.6e-3350.52Show/hide
Query:  MTYPDSFIVPYSIGGIDLGCALSDLGSSINLMSLSILKKLEIEE----------------SLRWDYCKEEAYYELFST-----QDELDYILEDVNVAS--
        MT   SF+V  SIG + LG +L DLG+SINLM LSI KK +I E                 L+     EE+YY+LF+      +DE +YILE+VNV S  
Subjt:  MTYPDSFIVPYSIGGIDLGCALSDLGSSINLMSLSILKKLEIEE----------------SLRWDYCKEEAYYELFST-----QDELDYILEDVNVAS--

Query:  ------------DKKIKSSTEEPPELELNPLPNHLKYAYLGENDTLPAIISAHMDVAKEKALLNILKHLMKAIGWTLVDIHGISPSYCMYKI
                    +KK KSS EEPPELEL P  NHLKYAYLG NDTL  IIS H+D  +EK LLNILK   KA GWTL DI GISPS    K+
Subjt:  ------------DKKIKSSTEEPPELELNPLPNHLKYAYLGENDTLPAIISAHMDVAKEKALLNILKHLMKAIGWTLVDIHGISPSYCMYKI

A0A5D3BDT2 RT_RNaseH domain-containing protein1.7e-3544.17Show/hide
Query:  QVTRNVFKNGVPEKMTYPDSFIVPYSIGGIDLGCALSDLGSSINLMSLSILKKLEIEE----SLRW---------------------------------D
        Q T +++KNGV EKMTYP SF VP SI G+DLG  L DLG+SINLM LSI KKL+I+E     +R+                                 D
Subjt:  QVTRNVFKNGVPEKMTYPDSFIVPYSIGGIDLGCALSDLGSSINLMSLSILKKLEIEE----SLRW---------------------------------D

Query:  YCKEEAYYEL-----FSTQDELDYILE----------------------DVNVASDKKIKSSTEEPPELELNPLPNHLKYAYLGENDTLPAIISAHMDVA
        Y  +E    +      ST   L YI +                       ++  S+K  K S  EP ELEL PLPNHLKY YLGENDTLP IIS H++  
Subjt:  YCKEEAYYEL-----FSTQDELDYILE----------------------DVNVASDKKIKSSTEEPPELELNPLPNHLKYAYLGENDTLPAIISAHMDVA

Query:  KEKALLNILKHLMKAIGWTLVDIHGISPSYCMYKIKLEEG
        +E+ALLN LK   K IGWTL DI G SPS  M+KIKLEEG
Subjt:  KEKALLNILKHLMKAIGWTLVDIHGISPSYCMYKIKLEEG

A0A5D3BM69 Uncharacterized protein1.7e-3857.31Show/hide
Query:  QVTRNVFKNGVPEKMTYPDSFIVPYSIGGIDLGCALSDLGSSINLMSLSILKKLEIEE------SLRWDYCKEEAYYELFST-----QDELDYILEDVN-
        Q T N+FKNGVP+KMT P SF +PYSIG +DLG AL +L +++NL+ LSI KKL+I E       L+     EEAYYELFST     +DE DY LE+VN 
Subjt:  QVTRNVFKNGVPEKMTYPDSFIVPYSIGGIDLGCALSDLGSSINLMSLSILKKLEIEE------SLRWDYCKEEAYYELFST-----QDELDYILEDVN-

Query:  -------------VASDKKIKSSTEEPPELELNPLPNHLKYAYLGENDTLPAIISAHMDVAKEKALLNILK
                        +KKIK S +EP ELEL PLPNHLKYAYLGENDTLP IISAH+D AKE ALL +LK
Subjt:  -------------VASDKKIKSSTEEPPELELNPLPNHLKYAYLGENDTLPAIISAHMDVAKEKALLNILK

A0A5D3DE84 Prostatic spermine-binding protein-like1.0e-5198.11Show/hide
Query:  ESLRWDYCKEEAYYELFSTQDELDYILEDVNVASDKKIKSSTEEPPELELNPLPNHLKYAYLGENDTLPAIISAHMDVAKEKALLNILKHLMKAIGWTLV
        ESLRWDYCKEEAYYELFSTQDELDYILEDVNVASDKKIKSSTEEPPELELNPLPNHLKYAYLGENDTLPAIISAHMDVAKEKALLNILKHLMKAIGWTLV
Subjt:  ESLRWDYCKEEAYYELFSTQDELDYILEDVNVASDKKIKSSTEEPPELELNPLPNHLKYAYLGENDTLPAIISAHMDVAKEKALLNILKHLMKAIGWTLV

Query:  DIHGIS
        DIH I+
Subjt:  DIHGIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGTAACAAGAAACGTCTTCAAGAATGGGGTGCCAGAGAAGATGACATATCCTGATAGCTTCATTGTTCCCTACTCAATAGGTGGAATAGATTTGGGTTGTGCTCT
ATCTGATCTTGGGTCGAGCATCAACTTGATGTCTCTTTCTATCTTGAAGAAATTAGAGATAGAGGAGTCCCTTCGATGGGACTATTGCAAGGAAGAAGCCTACTATGAGC
TGTTTAGCACGCAAGATGAACTAGATTATATACTGGAAGATGTAAACGTCGCATCTGACAAAAAGATAAAGTCATCAACTGAAGAGCCACCAGAATTAGAGCTCAACCCT
TTGCCTAACCACTTGAAGTATGCATATTTAGGAGAGAATGACACTCTGCCCGCCATCATCTCCGCCCACATGGATGTTGCAAAAGAGAAGGCGTTACTGAATATCCTTAA
ACACCTTATGAAGGCAATAGGATGGACCCTGGTAGACATCCACGGCATAAGTCCATCCTATTGCATGTATAAAATTAAGTTAGAAGAGGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGTAACAAGAAACGTCTTCAAGAATGGGGTGCCAGAGAAGATGACATATCCTGATAGCTTCATTGTTCCCTACTCAATAGGTGGAATAGATTTGGGTTGTGCTCT
ATCTGATCTTGGGTCGAGCATCAACTTGATGTCTCTTTCTATCTTGAAGAAATTAGAGATAGAGGAGTCCCTTCGATGGGACTATTGCAAGGAAGAAGCCTACTATGAGC
TGTTTAGCACGCAAGATGAACTAGATTATATACTGGAAGATGTAAACGTCGCATCTGACAAAAAGATAAAGTCATCAACTGAAGAGCCACCAGAATTAGAGCTCAACCCT
TTGCCTAACCACTTGAAGTATGCATATTTAGGAGAGAATGACACTCTGCCCGCCATCATCTCCGCCCACATGGATGTTGCAAAAGAGAAGGCGTTACTGAATATCCTTAA
ACACCTTATGAAGGCAATAGGATGGACCCTGGTAGACATCCACGGCATAAGTCCATCCTATTGCATGTATAAAATTAAGTTAGAAGAGGGTTAA
Protein sequenceShow/hide protein sequence
MQVTRNVFKNGVPEKMTYPDSFIVPYSIGGIDLGCALSDLGSSINLMSLSILKKLEIEESLRWDYCKEEAYYELFSTQDELDYILEDVNVASDKKIKSSTEEPPELELNP
LPNHLKYAYLGENDTLPAIISAHMDVAKEKALLNILKHLMKAIGWTLVDIHGISPSYCMYKIKLEEG