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IVF0009794 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009794
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionF-box/LRR-repeat protein
Genome locationchr09:21816099..21816570
RNA-Seq ExpressionIVF0009794
SyntenyIVF0009794
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042782.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa]9.48e-54100Show/hide
Query:  MASQNSTPPSLFLFLFIILLTTTPLHAARRLPASAPQPENDSLRPPTTTTFSFAQPPAAVDDQITSRNYGVSLRKVPAGPNPLHN
        MASQNSTPPSLFLFLFIILLTTTPLHAARRLPASAPQPENDSLRPPTTTTFSFAQPPAAVDDQITSRNYGVSLRKVPAGPNPLHN
Subjt:  MASQNSTPPSLFLFLFIILLTTTPLHAARRLPASAPQPENDSLRPPTTTTFSFAQPPAAVDDQITSRNYGVSLRKVPAGPNPLHN

KAG6579492.1 hypothetical protein SDJN03_23940, partial [Cucurbita argyrosperma subsp. sororia]2.62e-2668.6Show/hide
Query:  MASQNSTPPSLFLFLFIILLTTT-PLHAARRLPASAPQPENDSLRPPTTTTFSFAQPPAAVDDQITSRNYGVSLRKVPAGPNPLHN
        MASQN    SL LFLFIILLTTT PL A RRL  +   PENDSL PP TT+FSF QPP  V++Q  S+NY VS RKVPAGPNPLHN
Subjt:  MASQNSTPPSLFLFLFIILLTTT-PLHAARRLPASAPQPENDSLRPPTTTTFSFAQPPAAVDDQITSRNYGVSLRKVPAGPNPLHN

KAG6606114.1 Methyl-CpG-binding domain-containing protein 13, partial [Cucurbita argyrosperma subsp. sororia]1.48e-1355.7Show/hide
Query:  MASQNSTPPSLFLFLFIILLTTTPLHAARRLPASAPQPENDSLRPPTTTTFSFAQPPAAVDDQITSRNYGVSLRKVPAG
        MAS N     L LFL  ILLTT  L AA      A QP NDSL+PPT++TFS  + P AV+D I  +N+ VSLRKVPAG
Subjt:  MASQNSTPPSLFLFLFIILLTTTPLHAARRLPASAPQPENDSLRPPTTTTFSFAQPPAAVDDQITSRNYGVSLRKVPAG

KGN50125.1 hypothetical protein Csa_000058 [Cucumis sativus]2.09e-4286.52Show/hide
Query:  MASQNSTPP-SLFLFLFIILLTTT-PLHAARRLPASAPQPENDSL--RPPTTTTFSFAQPPAAVDDQITSRNYGVSLRKVPAGPNPLHN
        MASQNS PP SLFLFLF+ILLTTT PLHAARR P SAPQPENDSL   PPTT+TFSF QPPAAV+DQITSRNYGVSLRKVPAGPNPLHN
Subjt:  MASQNSTPP-SLFLFLFIILLTTT-PLHAARRLPASAPQPENDSL--RPPTTTTFSFAQPPAAVDDQITSRNYGVSLRKVPAGPNPLHN

PNT45204.1 hypothetical protein POPTR_003G124000 [Populus trichocarpa]7.28e-0536.47Show/hide
Query:  NSTPPSLFLFLFIILLTTTPLHAARRLPASAPQPENDSLRPPTTTTFSFAQPPAAVD----DQITSRNYGVSLRKVPAGPNPLHN
        N  P   F+FL II+L  + L + R L                 T  S+  P  A +    D+I    YGVS R VP GPNPLHN
Subjt:  NSTPPSLFLFLFIILLTTTPLHAARRLPASAPQPENDSLRPPTTTTFSFAQPPAAVD----DQITSRNYGVSLRKVPAGPNPLHN

TrEMBL top hitse value%identityAlignment
A0A0A0KKA9 Uncharacterized protein8.1e-3186.52Show/hide
Query:  MASQNSTPP-SLFLFLFIILL-TTTPLHAARRLPASAPQPEND--SLRPPTTTTFSFAQPPAAVDDQITSRNYGVSLRKVPAGPNPLHN
        MASQNS PP SLFLFLF+ILL TTTPLHAARR P SAPQPEND  SL PPTT+TFSF QPPAAV+DQITSRNYGVSLRKVPAGPNPLHN
Subjt:  MASQNSTPP-SLFLFLFIILL-TTTPLHAARRLPASAPQPEND--SLRPPTTTTFSFAQPPAAVDDQITSRNYGVSLRKVPAGPNPLHN

A0A5A7THA6 F-box/LRR-repeat protein2.1e-39100Show/hide
Query:  MASQNSTPPSLFLFLFIILLTTTPLHAARRLPASAPQPENDSLRPPTTTTFSFAQPPAAVDDQITSRNYGVSLRKVPAGPNPLHN
        MASQNSTPPSLFLFLFIILLTTTPLHAARRLPASAPQPENDSLRPPTTTTFSFAQPPAAVDDQITSRNYGVSLRKVPAGPNPLHN
Subjt:  MASQNSTPPSLFLFLFIILLTTTPLHAARRLPASAPQPENDSLRPPTTTTFSFAQPPAAVDDQITSRNYGVSLRKVPAGPNPLHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCAAAACTCCACTCCTCCTTCTCTCTTCCTCTTCCTCTTCATAATTCTCCTCACCACCACCCCTCTCCACGCCGCCCGCCGTCTCCCCGCCTCAGCCCCACA
ACCGGAAAATGATTCTCTCCGCCCACCCACCACCACAACATTTTCATTCGCACAACCGCCCGCCGCCGTGGATGACCAAATCACTTCCCGAAACTACGGCGTTTCACTCC
GCAAAGTCCCCGCCGGTCCCAACCCACTTCATAACTAA
mRNA sequenceShow/hide mRNA sequence
CTTATTCTCTCTCAAAAGCCTCTCTCTCTTTCTCTCTCTCTCCCCTCCATTGAAAAACCTTAAAAACACCTCTCTCAAATAAAAATGGCTTCTCAAAACTCCACTCCTCC
TTCTCTCTTCCTCTTCCTCTTCATAATTCTCCTCACCACCACCCCTCTCCACGCCGCCCGCCGTCTCCCCGCCTCAGCCCCACAACCGGAAAATGATTCTCTCCGCCCAC
CCACCACCACAACATTTTCATTCGCACAACCGCCCGCCGCCGTGGATGACCAAATCACTTCCCGAAACTACGGCGTTTCACTCCGCAAAGTCCCCGCCGGTCCCAACCCA
CTTCATAACTAATCGAATCAACCTCCGATCTTAAGGGAAAAATTATTCAATGTGAAGGTCTCTCTCGTAACAATTCTTCCATACAGGTTCGAAATACAAATTTTCGAATT
CTCAGTCACATTATTTTAATTATAATTTTTTT
Protein sequenceShow/hide protein sequence
MASQNSTPPSLFLFLFIILLTTTPLHAARRLPASAPQPENDSLRPPTTTTFSFAQPPAAVDDQITSRNYGVSLRKVPAGPNPLHN