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IVF0009795 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009795
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr10:25492883..25493304
RNA-Seq ExpressionIVF0009795
SyntenyIVF0009795
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033263.1 retrotransposon protein [Cucumis melo var. makuwa]7.15e-6383.49Show/hide
Query:  MTEKLPGCQVRATTVIDCRIKTLKRTFQVITEIQEPACSDFGWNDEQKCIIANKELFDDWSHPAAKGLLNKPFSYYDKLTYVFGRDRATGRFAETFVDMG
        M EKLPGCQVRATTVIDCRIKTLKRTFQ I E+Q PACS FGWNDE+KCI+A KELFD+WSHPAAKGLLNK F YYD+LTYVFGRDRATGRFAETF D+G
Subjt:  MTEKLPGCQVRATTVIDCRIKTLKRTFQVITEIQEPACSDFGWNDEQKCIIANKELFDDWSHPAAKGLLNKPFSYYDKLTYVFGRDRATGRFAETFVDMG

Query:  SNEPAGMTD
        SNEP G  D
Subjt:  SNEPAGMTD

KAA0050400.1 retrotransposon protein [Cucumis melo var. makuwa]5.78e-6181.98Show/hide
Query:  MTEKLPGCQVRATTVIDCRIKTLKRTFQVITEIQEPACSDFGWNDEQKCIIANKELFDDW--SHPAAKGLLNKPFSYYDKLTYVFGRDRATGRFAETFVD
        M EKLPGCQVRATTVIDCRIKTLKRTFQ I E++ PACS FGWNDE+KCI+A KELFD+W  SHPAAKGLLNKPFSYYD+LTYVFGRDRAT RFAETF D
Subjt:  MTEKLPGCQVRATTVIDCRIKTLKRTFQVITEIQEPACSDFGWNDEQKCIIANKELFDDW--SHPAAKGLLNKPFSYYDKLTYVFGRDRATGRFAETFVD

Query:  MGSNEPAGMTD
        +GSNEP G  D
Subjt:  MGSNEPAGMTD

KAA0054186.1 retrotransposon protein [Cucumis melo var. makuwa]4.33e-7098.13Show/hide
Query:  MTEKLPGCQVRATTVIDCRIKTLKRTFQVITEIQEPACSDFGWNDEQKCIIANKELFDDW--SHPAAKGLLNKPFSYYDKLTYVFGRDRATGRFAETFVD
        MTEKLPGCQVRATTVIDCRIKTLKRTFQVITEIQEPACSDFGWNDEQKCIIANKELFDDW  SHPAAKGLLNKPFSYYDKLTYVFGRDRATGRFAETFVD
Subjt:  MTEKLPGCQVRATTVIDCRIKTLKRTFQVITEIQEPACSDFGWNDEQKCIIANKELFDDW--SHPAAKGLLNKPFSYYDKLTYVFGRDRATGRFAETFVD

Query:  MGSNEPA
        MGSNEPA
Subjt:  MGSNEPA

KAA0057610.1 retrotransposon protein [Cucumis melo var. makuwa]1.49e-6081.98Show/hide
Query:  MTEKLPGCQVRATTVIDCRIKTLKRTFQVITEIQEPACSDFGWNDEQKCIIANKELFDDW--SHPAAKGLLNKPFSYYDKLTYVFGRDRATGRFAETFVD
        M EKLPGCQVRATTVIDCRIKTLKRTFQ I E++ PACS FGWNDE+KCI+A KELFD+W  SHPAAKGLLNKPF YYD+LTYVFGRDRATGRFAETF D
Subjt:  MTEKLPGCQVRATTVIDCRIKTLKRTFQVITEIQEPACSDFGWNDEQKCIIANKELFDDW--SHPAAKGLLNKPFSYYDKLTYVFGRDRATGRFAETFVD

Query:  MGSNEPAGMTD
        +GSNEP G  D
Subjt:  MGSNEPAGMTD

KAA0065477.1 retrotransposon protein [Cucumis melo var. makuwa]1.84e-6181.98Show/hide
Query:  MTEKLPGCQVRATTVIDCRIKTLKRTFQVITEIQEPACSDFGWNDEQKCIIANKELFDDW--SHPAAKGLLNKPFSYYDKLTYVFGRDRATGRFAETFVD
        M EKLPGCQVRATTVIDCRIKTLKRTFQ I E++ PACS FGWNDE+KCI+A KELFD+W  SHPAAKGLLNKPF YYD+LTYVFGRDRATGRFAETF D
Subjt:  MTEKLPGCQVRATTVIDCRIKTLKRTFQVITEIQEPACSDFGWNDEQKCIIANKELFDDW--SHPAAKGLLNKPFSYYDKLTYVFGRDRATGRFAETFVD

Query:  MGSNEPAGMTD
        +GSNEP G  D
Subjt:  MGSNEPAGMTD

TrEMBL top hitse value%identityAlignment
A0A5A7SS54 Retrotransposon protein7.3e-4883.49Show/hide
Query:  MTEKLPGCQVRATTVIDCRIKTLKRTFQVITEIQEPACSDFGWNDEQKCIIANKELFDDWSHPAAKGLLNKPFSYYDKLTYVFGRDRATGRFAETFVDMG
        M EKLPGCQVRATTVIDCRIKTLKRTFQ I E+Q PACS FGWNDE+KCI+A KELFD+WSHPAAKGLLNK F YYD+LTYVFGRDRATGRFAETF D+G
Subjt:  MTEKLPGCQVRATTVIDCRIKTLKRTFQVITEIQEPACSDFGWNDEQKCIIANKELFDDWSHPAAKGLLNKPFSYYDKLTYVFGRDRATGRFAETFVDMG

Query:  SNEPAGMTD
        SNEP G  D
Subjt:  SNEPAGMTD

A0A5A7SWU2 Retrotransposon protein6.1e-4782.88Show/hide
Query:  MTEKLPGCQVRATTVIDCRIKTLKRTFQVITEIQEPACSDFGWNDEQKCIIANKELFDDW--SHPAAKGLLNKPFSYYDKLTYVFGRDRATGRFAETFVD
        M EKLPGCQVRATTVIDCRIKTLKRTFQ I E++ PACS FGWNDE+KCIIA KELFD+W  SHP AKGLLNKPF YYD+LTYVFGRDRATGRFAETF D
Subjt:  MTEKLPGCQVRATTVIDCRIKTLKRTFQVITEIQEPACSDFGWNDEQKCIIANKELFDDW--SHPAAKGLLNKPFSYYDKLTYVFGRDRATGRFAETFVD

Query:  MGSNEPAGMTD
        MGSNEP G  D
Subjt:  MGSNEPAGMTD

A0A5A7UIT2 Retrotransposon protein3.0e-5498.13Show/hide
Query:  MTEKLPGCQVRATTVIDCRIKTLKRTFQVITEIQEPACSDFGWNDEQKCIIANKELFDDW--SHPAAKGLLNKPFSYYDKLTYVFGRDRATGRFAETFVD
        MTEKLPGCQVRATTVIDCRIKTLKRTFQVITEIQEPACSDFGWNDEQKCIIANKELFDDW  SHPAAKGLLNKPFSYYDKLTYVFGRDRATGRFAETFVD
Subjt:  MTEKLPGCQVRATTVIDCRIKTLKRTFQVITEIQEPACSDFGWNDEQKCIIANKELFDDW--SHPAAKGLLNKPFSYYDKLTYVFGRDRATGRFAETFVD

Query:  MGSNEPA
        MGSNEPA
Subjt:  MGSNEPA

A0A5A7VES2 Retrotransposon protein6.1e-4782.88Show/hide
Query:  MTEKLPGCQVRATTVIDCRIKTLKRTFQVITEIQEPACSDFGWNDEQKCIIANKELFDDW--SHPAAKGLLNKPFSYYDKLTYVFGRDRATGRFAETFVD
        M EKLPGCQVRATTVIDCRIKTLKRTFQ I E++ PACS FGWNDE+KCIIA KELFD+W  SHPAAKGLLNKPF YYD+LTYVFGRDRATGRFAETF D
Subjt:  MTEKLPGCQVRATTVIDCRIKTLKRTFQVITEIQEPACSDFGWNDEQKCIIANKELFDDW--SHPAAKGLLNKPFSYYDKLTYVFGRDRATGRFAETFVD

Query:  MGSNEPAGMTD
        +GSNEP G  D
Subjt:  MGSNEPAGMTD

A0A5D3DBP2 Retrotransposon protein2.1e-4782.88Show/hide
Query:  MTEKLPGCQVRATTVIDCRIKTLKRTFQVITEIQEPACSDFGWNDEQKCIIANKELFDDW--SHPAAKGLLNKPFSYYDKLTYVFGRDRATGRFAETFVD
        M EKLPGCQVRATTVIDCRIKTLKRTFQ I E++ PACS FGWNDE+KCI+A KELFD+W  SHPAAKGLLNKPFSYYD+LTYVFGRDRATGRFAETF D
Subjt:  MTEKLPGCQVRATTVIDCRIKTLKRTFQVITEIQEPACSDFGWNDEQKCIIANKELFDDW--SHPAAKGLLNKPFSYYDKLTYVFGRDRATGRFAETFVD

Query:  MGSNEPAGMTD
        +GSNEP G  D
Subjt:  MGSNEPAGMTD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGAGAAACTACCTGGATGTCAGGTCCGTGCAACAACTGTAATTGACTGTAGAATAAAGACACTGAAGCGGACATTCCAGGTCATCACCGAAATACAGGAGCCAGC
GTGTAGTGACTTTGGATGGAACGATGAACAGAAATGTATCATTGCGAATAAAGAATTATTTGATGATTGGTCGCATCCTGCAGCGAAGGGACTCCTGAACAAACCATTTT
CGTATTATGACAAACTTACATATGTGTTCGGTCGTGATAGAGCGACGGGTCGGTTCGCTGAGACATTCGTCGACATGGGGTCTAACGAGCCTGCGGGTATGACAGATTTG
ATATGA
mRNA sequenceShow/hide mRNA sequence
ATGACGGAGAAACTACCTGGATGTCAGGTCCGTGCAACAACTGTAATTGACTGTAGAATAAAGACACTGAAGCGGACATTCCAGGTCATCACCGAAATACAGGAGCCAGC
GTGTAGTGACTTTGGATGGAACGATGAACAGAAATGTATCATTGCGAATAAAGAATTATTTGATGATTGGTCGCATCCTGCAGCGAAGGGACTCCTGAACAAACCATTTT
CGTATTATGACAAACTTACATATGTGTTCGGTCGTGATAGAGCGACGGGTCGGTTCGCTGAGACATTCGTCGACATGGGGTCTAACGAGCCTGCGGGTATGACAGATTTG
ATATGA
Protein sequenceShow/hide protein sequence
MTEKLPGCQVRATTVIDCRIKTLKRTFQVITEIQEPACSDFGWNDEQKCIIANKELFDDWSHPAAKGLLNKPFSYYDKLTYVFGRDRATGRFAETFVDMGSNEPAGMTDL
I