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IVF0009797 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009797
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein CUP-SHAPED COTYLEDON 3-like
Genome locationchr02:915074..915814
RNA-Seq ExpressionIVF0009797
SyntenyIVF0009797
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ARA91514.1 NAC domain transcription factor I [Cucumis melo]1.15e-0965.38Show/hide
Query:  SADSDRAVRNFSPQRQPKSHKVRDHIKASQNVQSKKETQLQLVSSLSKRRSI
        S DSDR  RNFS Q QPKSHK  DH+   QNVQSK+ETQ+Q+VSSLSK  ++
Subjt:  SADSDRAVRNFSPQRQPKSHKVRDHIKASQNVQSKKETQLQLVSSLSKRRSI

ARA91515.1 NAC domain transcription factor II [Cucumis melo]2.03e-1584.62Show/hide
Query:  SADSDRAVRNFSPQRQPKSHKVRDHIKASQNVQSKKETQLQLVSSLSKRRSI
        SADSDRAV+NF+ Q QPKSHKVRDHIKASQNVQSKKETQLQLVSSLSK +++
Subjt:  SADSDRAVRNFSPQRQPKSHKVRDHIKASQNVQSKKETQLQLVSSLSKRRSI

KAE8653385.1 hypothetical protein Csa_007462 [Cucumis sativus]3.94e-3465.74Show/hide
Query:  STDFDRAVRNFSSQRQPKSHKVLDHVESSENGRSIDISSARHRKDVMSINCITSCGSADSDRAVRNFSPQRQPKSHKVRDHIKASQNVQSKKETQLQLVS
        S D D+ +RNF  +R+ K HK  DHVESS++ RSID+SS   RKD     CI SCG+ D DRAVRNFS QRQPKSHKV DHIKASQNVQSKKETQLQ+VS
Subjt:  STDFDRAVRNFSSQRQPKSHKVLDHVESSENGRSIDISSARHRKDVMSINCITSCGSADSDRAVRNFSPQRQPKSHKVRDHIKASQNVQSKKETQLQLVS

Query:  SLSKRRSI
        SL K +++
Subjt:  SLSKRRSI

TYK10207.1 protein CUP-SHAPED COTYLEDON 3-like [Cucumis melo var. makuwa]7.36e-6395.76Show/hide
Query:  MSINCITSCGSTDFDRAVRNFSSQRQPKSHKVLDHVESSENGRSIDISSARHRKDVMSINCITSCGSADSDRAVRNFSPQRQPKSHKVRDHIKASQNVQS
        MSINCITSCGSTDFDRAVRNFSSQRQPKSHKVLDHVESSENGRSIDISSARHRKDVMSINCITSCGSADSDRAVRNFS QRQPKSHKVRDHIKASQNVQS
Subjt:  MSINCITSCGSTDFDRAVRNFSSQRQPKSHKVLDHVESSENGRSIDISSARHRKDVMSINCITSCGSADSDRAVRNFSPQRQPKSHKVRDHIKASQNVQS

Query:  KKETQLQLVSSLSKRRSI
        KKETQLQLVSSLSK +++
Subjt:  KKETQLQLVSSLSKRRSI

XP_016900940.1 PREDICTED: uncharacterized protein LOC103492204 [Cucumis melo]1.23e-2793.55Show/hide
Query:  MSINCITSCGSADSDRAVRNFSPQRQPKSHKVRDHIKASQNVQSKKETQLQLVSSLSKRRSI
        MSINCITSCGSADSDRAVRNFSPQRQPKSHKVRDHIKASQNVQSKKETQLQLVSSLSK +++
Subjt:  MSINCITSCGSADSDRAVRNFSPQRQPKSHKVRDHIKASQNVQSKKETQLQLVSSLSKRRSI

TrEMBL top hitse value%identityAlignment
A0A0A0LW42 Uncharacterized protein6.3e-5173.01Show/hide
Query:  STDFDRAVRNFSSQRQPKSHKVLDHVESSENGRSIDISSARHRKDVMSINCITSCGSADSDRAVRNFSPQRQPKSHKVRDHIKASQNVQSKKETQLQLVS
        S D D+ +RNF  +R+ K HK  DHVESS++ RSID+SS   RKD     CI SCG+ D DRAVRNFS QRQPKSHKV DHIKASQNVQSKKETQLQ+VS
Subjt:  STDFDRAVRNFSSQRQPKSHKVLDHVESSENGRSIDISSARHRKDVMSINCITSCGSADSDRAVRNFSPQRQPKSHKVRDHIKASQNVQSKKETQLQLVS

Query:  SLSKRRSIFRLKQFQNELKLSNQLHLQIKILQPAK---ANWPRVSRVKDNVPQVARQVLLYGN
        SL KRRSIFRLKQFQNELKLSNQL LQIKIL   +   ANWP VSRVKD+VPQVARQVLL+GN
Subjt:  SLSKRRSIFRLKQFQNELKLSNQLHLQIKILQPAK---ANWPRVSRVKDNVPQVARQVLLYGN

A0A1S3BQH1 protein CUP-SHAPED COTYLEDON 3-like8.6e-0865.38Show/hide
Query:  SADSDRAVRNFSPQRQPKSHKVRDHIKASQNVQSKKETQLQLVSSLSKRRSI
        S DSDR  RNFS Q QPKSHK  DH+   QNVQSK+ETQ+Q+VSSLSK  ++
Subjt:  SADSDRAVRNFSPQRQPKSHKVRDHIKASQNVQSKKETQLQLVSSLSKRRSI

A0A1S4DYZ1 uncharacterized protein LOC1034922042.3e-2193.55Show/hide
Query:  MSINCITSCGSADSDRAVRNFSPQRQPKSHKVRDHIKASQNVQSKKETQLQLVSSLSKRRSI
        MSINCITSCGSADSDRAVRNFSPQRQPKSHKVRDHIKASQNVQSKKETQLQLVSSLSK +++
Subjt:  MSINCITSCGSADSDRAVRNFSPQRQPKSHKVRDHIKASQNVQSKKETQLQLVSSLSKRRSI

A0A5D3CE10 Protein CUP-SHAPED COTYLEDON 3-like3.0e-5395.76Show/hide
Query:  MSINCITSCGSTDFDRAVRNFSSQRQPKSHKVLDHVESSENGRSIDISSARHRKDVMSINCITSCGSADSDRAVRNFSPQRQPKSHKVRDHIKASQNVQS
        MSINCITSCGSTDFDRAVRNFSSQRQPKSHKVLDHVESSENGRSIDISSARHRKDVMSINCITSCGSADSDRAVRNFS QRQPKSHKVRDHIKASQNVQS
Subjt:  MSINCITSCGSTDFDRAVRNFSSQRQPKSHKVLDHVESSENGRSIDISSARHRKDVMSINCITSCGSADSDRAVRNFSPQRQPKSHKVRDHIKASQNVQS

Query:  KKETQLQLVSSLSKRRSI
        KKETQLQLVSSLSK +++
Subjt:  KKETQLQLVSSLSKRRSI

A0A678NU60 NAC domain transcription factor II8.9e-1384.62Show/hide
Query:  SADSDRAVRNFSPQRQPKSHKVRDHIKASQNVQSKKETQLQLVSSLSKRRSI
        SADSDRAV+NF+ Q QPKSHKVRDHIKASQNVQSKKETQLQLVSSLSK +++
Subjt:  SADSDRAVRNFSPQRQPKSHKVRDHIKASQNVQSKKETQLQLVSSLSKRRSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATCAACTGCATAACATCGTGCGGTAGTACTGACTTTGACAGAGCAGTAAGAAATTTCAGCTCTCAACGTCAACCTAAATCCCATAAGGTTCTAGACCATGTAGA
GTCTTCAGAAAATGGTCGGTCAATAGATATTTCCTCTGCCCGCCATCGTAAAGATGTCATGTCCATCAACTGTATAACATCGTGCGGTAGTGCTGACTCTGACAGAGCAG
TAAGAAATTTCAGCCCTCAACGTCAACCTAAATCCCATAAGGTTCGAGACCATATCAAAGCTTCACAAAATGTCCAGTCGAAGAAGGAAACTCAGCTCCAATTAGTATCA
TCCCTCAGCAAGCGTCGTTCAATTTTCAGGTTAAAGCAGTTCCAGAACGAATTGAAGTTGTCAAACCAGCTGCATCTTCAAATAAAGATACTCCAACCGGCCAAAGCCAA
CTGGCCAAGGGTCTCGAGGGTCAAGGATAATGTTCCTCAAGTCGCAAGACAAGTGCTACTGTATGGAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCATCAACTGCATAACATCGTGCGGTAGTACTGACTTTGACAGAGCAGTAAGAAATTTCAGCTCTCAACGTCAACCTAAATCCCATAAGGTTCTAGACCATGTAGA
GTCTTCAGAAAATGGTCGGTCAATAGATATTTCCTCTGCCCGCCATCGTAAAGATGTCATGTCCATCAACTGTATAACATCGTGCGGTAGTGCTGACTCTGACAGAGCAG
TAAGAAATTTCAGCCCTCAACGTCAACCTAAATCCCATAAGGTTCGAGACCATATCAAAGCTTCACAAAATGTCCAGTCGAAGAAGGAAACTCAGCTCCAATTAGTATCA
TCCCTCAGCAAGCGTCGTTCAATTTTCAGGTTAAAGCAGTTCCAGAACGAATTGAAGTTGTCAAACCAGCTGCATCTTCAAATAAAGATACTCCAACCGGCCAAAGCCAA
CTGGCCAAGGGTCTCGAGGGTCAAGGATAATGTTCCTCAAGTCGCAAGACAAGTGCTACTGTATGGAAATTGA
Protein sequenceShow/hide protein sequence
MSINCITSCGSTDFDRAVRNFSSQRQPKSHKVLDHVESSENGRSIDISSARHRKDVMSINCITSCGSADSDRAVRNFSPQRQPKSHKVRDHIKASQNVQSKKETQLQLVS
SLSKRRSIFRLKQFQNELKLSNQLHLQIKILQPAKANWPRVSRVKDNVPQVARQVLLYGN