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IVF0009818 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009818
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr03:11620258..11620464
RNA-Seq ExpressionIVF0009818
SyntenyIVF0009818
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054440.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]2.17e-1045.9Show/hide
Query:  MAKYVIALVLYEEDNCKQFDEGLRTEIQTPITASAYWLNFHKMVDAVMRVEGSLAEKEDKS
        +AKY ++ ++ +E+ CK F   LRT I+ P+T S  WL+F K+V+A MRVE +LAE++  S
Subjt:  MAKYVIALVLYEEDNCKQFDEGLRTEIQTPITASAYWLNFHKMVDAVMRVEGSLAEKEDKS

KAA0062762.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]9.36e-1146.77Show/hide
Query:  MAKYVIALVLYEEDNCKQFDEGLRTEIQTPITASAYWLNFHKMVDAVMRVEGSLAEKEDKSW
        +AKY +A V+ E D CK+F+EGLRTEI+  IT S  W +F K+V+ VM VE  + E +  ++
Subjt:  MAKYVIALVLYEEDNCKQFDEGLRTEIQTPITASAYWLNFHKMVDAVMRVEGSLAEKEDKSW

KAA0065476.1 uncharacterized protein E6C27_scaffold17G001750 [Cucumis melo var. makuwa]3.21e-1264.71Show/hide
Query:  DNCKQFDEGLRTEIQTPITASAYWLNFHKMVDAVMRVEGSLAEKEDKSWKR
        D CK F+EGLRT IQ P+TASA WLNF KMV+A MRVE +L   E KS+K+
Subjt:  DNCKQFDEGLRTEIQTPITASAYWLNFHKMVDAVMRVEGSLAEKEDKSWKR

TYK11035.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.37e-1044.83Show/hide
Query:  MAKYVIALVLYEEDNCKQFDEGLRTEIQTPITASAYWLNFHKMVDAVMRVEGSLAEKE
        +++Y   +V +E D C++F+ GLR EI+TP+TA A W NF ++V+  +RVE S+AE++
Subjt:  MAKYVIALVLYEEDNCKQFDEGLRTEIQTPITASAYWLNFHKMVDAVMRVEGSLAEKE

XP_038890030.1 uncharacterized protein LOC120079741 [Benincasa hispida]1.41e-1043.1Show/hide
Query:  MAKYVIALVLYEEDNCKQFDEGLRTEIQTPITASAYWLNFHKMVDAVMRVEGSLAEKE
        +++Y + ++  E+D C++F++GLR EI+TP+T++A WL+F+++V+   RVE SLA+ E
Subjt:  MAKYVIALVLYEEDNCKQFDEGLRTEIQTPITASAYWLNFHKMVDAVMRVEGSLAEKE

TrEMBL top hitse value%identityAlignment
A0A5A7TG44 DNA/RNA polymerases superfamily protein1.0e-0748.28Show/hide
Query:  MAKYVIALVLYEEDNCKQFDEGLRTEIQTPITASAYWLNFHKMVDAVMRVEGSLAEKE
        ++KY  +++  E   CK+F EGLR EI+TP+ ASA+W +F K+V+A +RVE SL E++
Subjt:  MAKYVIALVLYEEDNCKQFDEGLRTEIQTPITASAYWLNFHKMVDAVMRVEGSLAEKE

A0A5A7TLH7 Reverse transcriptase4.5e-0843.1Show/hide
Query:  MAKYVIALVLYEEDNCKQFDEGLRTEIQTPITASAYWLNFHKMVDAVMRVEGSLAEKE
        +++Y   ++ YE D C++F+ GLR EI+TP+T  A W NF ++V+  +RVE S+AE++
Subjt:  MAKYVIALVLYEEDNCKQFDEGLRTEIQTPITASAYWLNFHKMVDAVMRVEGSLAEKE

A0A5A7VGM1 Uncharacterized protein6.9e-0964.71Show/hide
Query:  DNCKQFDEGLRTEIQTPITASAYWLNFHKMVDAVMRVEGSLAEKEDKSWKR
        D CK F+EGLRT IQ P+TASA WLNF KMV+A MRVE +L   E KS+K+
Subjt:  DNCKQFDEGLRTEIQTPITASAYWLNFHKMVDAVMRVEGSLAEKEDKSWKR

A0A5A7VRP7 Retrotransposon protein, putative, Ty3-gypsy subclass3.4e-0844.83Show/hide
Query:  MAKYVIALVLYEEDNCKQFDEGLRTEIQTPITASAYWLNFHKMVDAVMRVEGSLAEKE
        +++Y   +V +E D C++F+ GLR EI+TP+TA A W NF ++V+  +RVE S+AE++
Subjt:  MAKYVIALVLYEEDNCKQFDEGLRTEIQTPITASAYWLNFHKMVDAVMRVEGSLAEKE

A0A5D3CHM7 DNA/RNA polymerases superfamily protein3.4e-0844.83Show/hide
Query:  MAKYVIALVLYEEDNCKQFDEGLRTEIQTPITASAYWLNFHKMVDAVMRVEGSLAEKE
        +++Y   +V +E D C++F+ GLR EI+TP+TA A W NF ++V+  +RVE S+AE++
Subjt:  MAKYVIALVLYEEDNCKQFDEGLRTEIQTPITASAYWLNFHKMVDAVMRVEGSLAEKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAGTATGTGATAGCTTTAGTATTATATGAGGAGGATAACTGTAAGCAATTTGACGAAGGATTAAGGACTGAAATTCAAACTCCAATTACAGCTAGCGCATACTG
GTTAAATTTTCATAAGATGGTTGATGCAGTCATGCGAGTTGAAGGGTCTTTGGCTGAAAAAGAAGATAAGAGTTGGAAAAGAGGTCAAGTTCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAGTATGTGATAGCTTTAGTATTATATGAGGAGGATAACTGTAAGCAATTTGACGAAGGATTAAGGACTGAAATTCAAACTCCAATTACAGCTAGCGCATACTG
GTTAAATTTTCATAAGATGGTTGATGCAGTCATGCGAGTTGAAGGGTCTTTGGCTGAAAAAGAAGATAAGAGTTGGAAAAGAGGTCAAGTTCTATGA
Protein sequenceShow/hide protein sequence
MAKYVIALVLYEEDNCKQFDEGLRTEIQTPITASAYWLNFHKMVDAVMRVEGSLAEKEDKSWKRGQVL