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IVF0009825 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0009825
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Genome locationchr10:8134173..8134642
RNA-Seq ExpressionIVF0009825
SyntenyIVF0009825
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34145.1 hypothetical protein [Cucumis melo subsp. melo]1.89e-5384.07Show/hide
Query:  MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIGSPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTS
        MS EKGS RGRTNSTSSKG+ PSSSSNS PSPMSA  Y MDLGFT + RSRSRL  I IGSPTESSTPPR S NLIRPSGG+IQMRPPASPSSNRESST 
Subjt:  MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIGSPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTS

Query:  PTTYSQAVTLDKR
        PTTYSQAVTLDKR
Subjt:  PTTYSQAVTLDKR

KAA0049709.1 hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa]1.59e-5281.42Show/hide
Query:  MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIGSPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTS
        MSLEK + RGRTNSTSSKGN PSSSSNS PSPMSA+ YAMDLGFTT+ RSRSR   IRIGSPTESSTPP+ STNLIRPSGG++QMR P SPSSNR+SST 
Subjt:  MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIGSPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTS

Query:  PTTYSQAVTLDKR
        PTTYSQAVT DKR
Subjt:  PTTYSQAVTLDKR

KAA0051485.1 hypothetical protein E6C27_scaffold174G00040 [Cucumis melo var. makuwa]5.93e-77100Show/hide
Query:  MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIGSPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTS
        MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIGSPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTS
Subjt:  MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIGSPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTS

Query:  PTTYSQAVTLDKRDSFKNLSGGL
        PTTYSQAVTLDKRDSFKNLSGGL
Subjt:  PTTYSQAVTLDKRDSFKNLSGGL

KAA0056175.1 hypothetical protein E6C27_scaffold697G00720 [Cucumis melo var. makuwa]4.31e-5280.53Show/hide
Query:  MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIGSPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTS
        MS EKGS RGRTNSTSSKGNHPSSSSNSA SPM+++ YAMDL FTT+ RSRSR   IR GSPTESSTPPR   NLIRPSGG++QMRPP SPSSNRESST 
Subjt:  MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIGSPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTS

Query:  PTTYSQAVTLDKR
        PTTYSQAVT DKR
Subjt:  PTTYSQAVTLDKR

TYK11076.1 hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa]4.31e-5282.3Show/hide
Query:  MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIGSPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTS
        MS EKGS RGRTNSTSSKGN PSSSSNSAPSPMSA+ Y MDLGFTT+IRSRSR   IR  SPTESSTPPR   NLIRPSG ++QMRPPASPSSNRESST 
Subjt:  MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIGSPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTS

Query:  PTTYSQAVTLDKR
        PTTYSQAVT DKR
Subjt:  PTTYSQAVTLDKR

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein1.5e-3881.42Show/hide
Query:  MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIGSPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTS
        MS +KGS RGRTNSTSSKGN P SSSNSAPSP+SA+ YAMDLGFTT+ R  SR +GI IGSPTESSTPPR STNLIRPS G++QMRPPASPSSNRESST 
Subjt:  MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIGSPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTS

Query:  PTTYSQAVTLDKR
        PTTYSQAVT DKR
Subjt:  PTTYSQAVTLDKR

A0A5A7U8A0 Uncharacterized protein1.5e-3881.42Show/hide
Query:  MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIGSPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTS
        MSLEK + RGRTNSTSSKGN PSSSSNS PSPMSA+ YAMDLGFTT+ RSRSR   IRIGSPTESSTPP+ STNLIRPSGG++QMR P SPSSNR+SST 
Subjt:  MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIGSPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTS

Query:  PTTYSQAVTLDKR
        PTTYSQAVT DKR
Subjt:  PTTYSQAVTLDKR

A0A5A7UCU9 Uncharacterized protein9.5e-57100Show/hide
Query:  MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIGSPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTS
        MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIGSPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTS
Subjt:  MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIGSPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTS

Query:  PTTYSQAVTLDKRDSFKNLSGGL
        PTTYSQAVTLDKRDSFKNLSGGL
Subjt:  PTTYSQAVTLDKRDSFKNLSGGL

A0A5A7URC1 Uncharacterized protein7.5e-3880.53Show/hide
Query:  MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIGSPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTS
        MS EKGS RGRTNSTSSKGNHPSSSSNSA SPM+++ YAMDL FTT+ RSRSR   IR GSPTESSTPPR   NLIRPSGG++QMRPP SPSSNRESST 
Subjt:  MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIGSPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTS

Query:  PTTYSQAVTLDKR
        PTTYSQAVT DKR
Subjt:  PTTYSQAVTLDKR

E5GCE6 Uncharacterized protein3.1e-3984.07Show/hide
Query:  MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIGSPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTS
        MS EKGS RGRTNSTSSKG+ PSSSSNS PSPMSA  Y MDLGFT + RSRSRL  I IGSPTESSTPPR S NLIRPSGG+IQMRPPASPSSNRESST 
Subjt:  MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIGSPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTS

Query:  PTTYSQAVTLDKR
        PTTYSQAVTLDKR
Subjt:  PTTYSQAVTLDKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTAGAAAAGGGAAGTGGTAGAGGAAGAACAAACTCTACTTCTTCAAAGGGCAATCACCCATCTTCTTCTTCTAATTCTGCACCCTCACCTATGAGTGCAAATAT
ATATGCAATGGATTTAGGGTTTACCACGATAATCCGATCCAGATCAAGATTATACGGCATACGGATTGGATCTCCCACGGAGTCATCAACTCCACCTAGGTCTTCGACCA
ATCTTATCCGTCCTTCTGGTGGAATCATTCAAATGAGGCCTCCTGCCTCTCCTTCATCAAATAGGGAGTCTTCTACTTCTCCTACAACTTATTCTCAGGCTGTCACCCTC
GATAAACGGGACAGTTTCAAAAATCTTTCCGGAGGACTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTAGAAAAGGGAAGTGGTAGAGGAAGAACAAACTCTACTTCTTCAAAGGGCAATCACCCATCTTCTTCTTCTAATTCTGCACCCTCACCTATGAGTGCAAATAT
ATATGCAATGGATTTAGGGTTTACCACGATAATCCGATCCAGATCAAGATTATACGGCATACGGATTGGATCTCCCACGGAGTCATCAACTCCACCTAGGTCTTCGACCA
ATCTTATCCGTCCTTCTGGTGGAATCATTCAAATGAGGCCTCCTGCCTCTCCTTCATCAAATAGGGAGTCTTCTACTTCTCCTACAACTTATTCTCAGGCTGTCACCCTC
GATAAACGGGACAGTTTCAAAAATCTTTCCGGAGGACTTTAA
Protein sequenceShow/hide protein sequence
MSLEKGSGRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIGSPTESSTPPRSSTNLIRPSGGIIQMRPPASPSSNRESSTSPTTYSQAVTL
DKRDSFKNLSGGL